This term is obsolete.

GO:0006486 JSON

protein glycosylation

Biological Process

Definition (GO:0006486 GONUTS page)

A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.

Secondary IDs

GO:0065006

823,843 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
protein-carbohydrate complex assembly related
protein amino acid glycosylation exact

Ancestor Chart

Ancestor chart for GO:0006486
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006486

Child Term Relationship to
GO:0006486
protein phosphate-linked glycosylation
is_a
protein O-linked glycosylation
is_a
negative regulation of protein glycosylation
negatively_regulates
protein glucuronylation
is_a
positive regulation of protein glycosylation
positively_regulates
protein N-linked glycosylation
is_a
protein galactosylation
is_a
protein C-linked glycosylation
is_a
regulation of protein glycosylation
regulates
protein S-linked glycosylation
is_a

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A6KJI3 10116 A6KJI3_RAT GO:0006486 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D6WQD5 7070 D6WQD5_TRICA GO:0070085 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein Q6AYL7 10116 Q6AYL7_RAT GO:0006486 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q7JRM5 7227 Q7JRM5_DROME GO:0070085 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein Q7Q9P6 7165 Q7Q9P6_ANOGA GO:0070085 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein Q7Z4T8 9606 GLTL5_HUMAN GO:0006486 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:24398516
NOT-qualified manual protein Q95JX4 9541 GLTL5_MACFA GO:0006486 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q9D4M9 10090 GLTL5_MOUSE GO:0006486 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024

Cross-references

Database ID Description
InterPro IPR001503 Glycosyl transferase family 10
InterPro IPR001675 Glycosyl transferase family 29
InterPro IPR002659 Glycosyl transferase, family 31
InterPro IPR002685 Glycosyl transferase, family 15
InterPro IPR003674 Oligosaccharyl transferase, STT3 subunit
InterPro IPR004139 Glycosyl transferase, family 13
InterPro IPR004263 Exostosin-like
InterPro IPR007676 Ribophorin I
InterPro IPR009448 UDP-glucose:Glycoprotein Glucosyltransferase
InterPro IPR012163 Sialyltransferase

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0006494 obsolete protein amino acid terminal glycosylation consider GO:0006486
GO:0033575 obsolete protein glycosylation at cell surface replaced_by GO:0006486
GO:0033576 obsolete protein glycosylation in cytosol replaced_by GO:0006486
GO:0033577 obsolete protein glycosylation in endoplasmic reticulum replaced_by GO:0006486
GO:0033578 obsolete protein glycosylation in Golgi replaced_by GO:0006486

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0006486 based on ALL annotations
The top 100 of 3,285 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein glycosylation
609.51 100.00 319,828 319,828
protein O-linked glycosylation
363.46 17.53 63,597 106,650
Golgi membrane
110.00 14.02 123,412 683,853
Golgi apparatus
83.06 12.01 160,725 1,179,370
mannosyltransferase activity
232.10 9.45 35,697 93,742
protein N-linked glycosylation
134.47 9.30 44,329 200,936
sialyltransferase activity
605.79 8.80 28,175 28,348
Golgi cisterna membrane
286.57 8.42 29,772 63,323
protein N-linked glycosylation via asparagine
486.43 8.02 26,176 32,799
glycosyltransferase activity
47.70 7.64 244,358 3,122,630
Totals 1928071 18527680
No co-occurrence statistics for GO:0006486 based on MANUAL annotations
The top 100 of 823 co-occurring terms
Co-occurring Term PR S% #Together #Compared
protein glycosylation
937.44 100.00 1,378 1,378
alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
904.87 18.02 250 259
oligosaccharide metabolic process
595.91 16.61 253 398
N-glycan processing
234.82 11.94 256 1,022
mannose-1-phosphate guanylyltransferase (GTP) activity
741.71 10.17 144 182
GDP-mannose biosynthetic process
400.99 9.39 148 346
dehydrodolichyl diphosphate synthase complex
730.40 8.98 127 163
dolichol biosynthetic process
465.06 8.43 127 256
dehydrodolichyl diphosphate synthase activity
260.52 7.44 127 457
dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity
927.58 6.82 94 95
Totals 5581 107294

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_pombe 61
goslim_prokaryote 97
goslim_yeast 163
goslim_generic 141

Change Log

Timestamp Action Category Detail
2023-12-15 Added SUBSET goslim_prokaryote
2023-07-08 Deleted SUBSET gocheck_do_not_annotate
2023-06-13 Added SUBSET gocheck_do_not_annotate
2022-04-05 Added RELATION is a GO:0036211 (protein modification process)
2022-04-05 Deleted RELATION is a GO:0006464 (cellular protein modification process)
2021-11-15 Added SUBSET goslim_generic
2020-02-28 Deleted XREF MIPS_funcat:14.07.02
2019-06-15 Added SYNONYM protein-carbohydrate complex assembly
2019-06-15 Added SECONDARY GO:0065006 (protein-carbohydrate complex assembly)
2019-05-04 Added XREF MIPS_funcat:14.07.02
Timestamp Action Category Detail
2010-10-24 Updated TERM protein glycosylation
2002-02-06 Updated TERM protein amino acid glycosylation
2001-10-01 Updated TERM protein amino acid glycosylation
2001-04-03 Updated TERM protein glycosylation
2001-03-30 Added TERM protein glycosylation
Timestamp Action Category Detail
2019-06-15 Added SYNONYM protein-carbohydrate complex assembly
2012-08-09 Added DEFINITION A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2012-08-09 Deleted DEFINITION A protein modification process that results in the addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2010-10-24 Added SYNONYM protein amino acid glycosylation
2010-02-07 Deleted DEFINITION The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2010-02-07 Added DEFINITION A protein modification process that results in the addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2008-05-13 Added DEFINITION The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2008-05-12 Deleted DEFINITION The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2004-03-13 Updated DEFINITION The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
2003-10-18 Updated DEFINITION The addition of a sugar unit to a protein amino acid, eg. the addition of glycan chains to proteins.
2003-04-24 Updated DEFINITION The addition of a sugar unit to a protein amino acid, e. g. the addition of glycan chains to proteins.
2002-11-27 Added DEFINITION The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
Timestamp Action Category Detail
2022-04-05 Added RELATION is a GO:0036211 (protein modification process)
2022-04-05 Deleted RELATION is a GO:0006464 (cellular protein modification process)
2017-08-13 Deleted RELATION is a GO:0044763 (single-organism cellular process)
2013-11-28 Added RELATION is a GO:0044763 (single-organism cellular process)
2012-08-09 Deleted RELATION is a GO:0044262 (obsolete cellular carbohydrate metabolic process)
2009-06-20 Added RELATION is a GO:0044262 (obsolete cellular carbohydrate metabolic process)
2008-04-01 Updated RELATION part of GO:0009101 (glycoprotein biosynthetic process)
2008-04-01 Updated RELATION is a GO:0043413 (macromolecule glycosylation)
2008-04-01 Updated RELATION is a GO:0006464 (cellular protein modification process)
Timestamp Action Category Detail
2020-02-28 Deleted XREF MIPS_funcat:14.07.02
2019-05-04 Added XREF MIPS_funcat:14.07.02
Timestamp Action Category Detail
2023-12-15 Added SUBSET goslim_prokaryote
2023-07-08 Deleted SUBSET gocheck_do_not_annotate
2023-06-13 Added SUBSET gocheck_do_not_annotate
2021-11-15 Added SUBSET goslim_generic
2019-06-15 Added SECONDARY GO:0065006 (protein-carbohydrate complex assembly)
2013-04-18 Updated SUBSET goslim_pombe
2013-04-18 Updated SUBSET goslim_yeast
2011-08-14 Added SUBSET goslim_yeast
2009-05-11 Added SUBSET goslim_pombe
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