GO:0006520
JSON
amino acid metabolic process
Biological Process
Definition (GO:0006520 GONUTS page)
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
Secondary IDs
GO:0006519
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
cellular amino acid and derivative metabolic process | related |
cellular amino acid metabolic process | exact |
amino acid and derivative metabolism | related |
cellular amino acid metabolism | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006520
Child Term | Relationship to GO:0006520 |
---|---|
proteinogenic amino acid metabolic process
|
is_a |
amino acid biosynthetic process
|
is_a |
chiral amino acid racemization
|
is_a |
negative regulation of amino acid metabolic process
|
negatively_regulates |
nicotianamine metabolic process
|
is_a |
regulation of amino acid metabolic process
|
regulates |
amino acid activation
|
is_a |
diaminopimelate metabolic process
|
is_a |
carnosine metabolic process
|
is_a |
alpha-amino acid metabolic process
|
is_a |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR000319 | Aspartate-semialdehyde dehydrogenase, conserved site |
InterPro | IPR000634 | Serine/threonine dehydratase, pyridoxal-phosphate-binding site |
InterPro | IPR000796 | Aspartate/other aminotransferase |
InterPro | IPR001342 | Homoserine dehydrogenase, catalytic |
InterPro | IPR001597 | Aromatic amino acid beta-eliminating lyase/threonine aldolase |
InterPro | IPR005958 | Tyrosine/nicotianamine aminotransferase |
InterPro | IPR006033 | Type I L-asparaginase family |
InterPro | IPR006095 | Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase |
InterPro | IPR006096 | Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal |
InterPro | IPR006097 | Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_input_or_output | CHEBI | CHEBI:35238 | amino acid zwitterion |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0018367 | obsolete free L-amino acid racemization | consider GO:0006520 |
GO:0019794 | obsolete nonprotein amino acid metabolic process | replaced_by GO:0006520 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006520 based on ALL annotations
The top 100 of 2,004 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
amino acid metabolic process
|
361.10 | 100.00 | 539,854 | 539,854 |
pyridoxal phosphate binding
|
47.85 | 11.23 | 228,984 | 1,728,166 |
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
|
241.82 | 10.89 | 62,110 | 92,744 |
amino acid binding
|
186.86 | 10.22 | 60,990 | 117,858 |
transaminase activity
|
44.02 | 9.20 | 147,272 | 1,208,015 |
threonine biosynthetic process
|
89.93 | 7.79 | 54,983 | 220,772 |
threonine catabolic process
|
118.75 | 7.69 | 49,226 | 149,688 |
aspartate carbamoyltransferase activity
|
219.33 | 7.57 | 42,953 | 70,716 |
glutamate dehydrogenase [NAD(P)+] activity
|
360.87 | 7.22 | 38,955 | 38,979 |
biosynthetic process
|
32.26 | 7.06 | 136,196 | 1,524,289 |
Totals | 3117890 | 64111316 |
No co-occurrence statistics for GO:0006520 based on MANUAL annotations
The top 100 of 347 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
amino acid metabolic process
|
1,268.96 | 100.00 | 1,018 | 1,018 |
transaminase activity
|
972.46 | 57.85 | 715 | 933 |
amine-lyase activity
|
1,259.89 | 13.64 | 139 | 140 |
pyridoxine biosynthetic process
|
979.92 | 13.13 | 139 | 180 |
pyridoxal phosphate biosynthetic process
|
570.83 | 11.70 | 139 | 309 |
aromatic-amino-acid transaminase activity
|
888.27 | 5.37 | 56 | 80 |
L-aspartate:2-oxoglutarate aminotransferase activity
|
193.46 | 4.38 | 59 | 387 |
1-aminocyclopropane-1-carboxylate synthase activity
|
832.75 | 4.04 | 42 | 64 |
amide biosynthetic process
|
1,268.96 | 3.83 | 39 | 39 |
amide catabolic process
|
380.69 | 3.52 | 39 | 130 |
Totals | 2710 | 35361 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_pir | 439 |
goslim_generic | 141 |
goslim_pombe | 61 |
goslim_yeast | 163 |
goslim_prokaryote | 97 |
goslim_chembl | 296 |
goslim_drosophila | 173 |
goslim_prokaryote_ribbon | 49 |
Change Log
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- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
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- Cross-references
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-05-30 | Deleted | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2024-02-24 | Added | SUBSET | goslim_prokaryote_ribbon |
2023-12-26 | Added | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:0019752 (carboxylic acid metabolic process) |
2023-12-15 | Added | SUBSET | goslim_prokaryote |
2022-08-26 | Deleted | SYNONYM | cellular amino acid and derivative metabolic process |
2022-08-26 | Deleted | SYNONYM | amino acid and derivative metabolism |
2022-08-26 | Deleted | SYNONYM | amino acid metabolic process |
2022-08-26 | Added | SYNONYM | cellular amino acid and derivative metabolic process |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-08-26 | Updated | TERM | amino acid metabolic process |
2009-06-16 | Updated | TERM | cellular amino acid metabolic process |
2007-01-15 | Updated | TERM | amino acid metabolic process |
2002-02-06 | Updated | TERM | amino acid metabolism |
2001-04-03 | Updated | TERM | amino acid metabolism |
2001-03-30 | Added | TERM | amino acid metabolism |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-08-26 | Deleted | SYNONYM | cellular amino acid and derivative metabolic process |
2022-08-26 | Deleted | SYNONYM | amino acid and derivative metabolism |
2022-08-26 | Deleted | SYNONYM | amino acid metabolic process |
2022-08-26 | Added | SYNONYM | cellular amino acid and derivative metabolic process |
2022-08-26 | Added | SYNONYM | cellular amino acid metabolic process |
2022-08-26 | Deleted | DEFINITION | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. |
2022-08-26 | Added | DEFINITION | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups. |
2022-08-26 | Added | SYNONYM | amino acid and derivative metabolism |
2010-11-19 | Deleted | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2010-11-19 | Added | DEFINITION | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. |
2010-11-19 | Added | SYNONYM | cellular amino acid and derivative metabolic process |
2010-11-19 | Added | SYNONYM | amino acid and derivative metabolism |
2010-03-03 | Added | SYNONYM | amino acid metabolic process |
2009-06-16 | Deleted | SYNONYM | amino acid metabolism |
2009-06-16 | Added | SYNONYM | cellular amino acid metabolism |
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2007-10-06 | Deleted | SYNONYM | free L-amino acid racemization |
2007-08-09 | Deleted | SYNONYM | amino acid metabolism |
2007-08-09 | Deleted | SYNONYM | free L-amino acid racemization |
2007-08-09 | Added | SYNONYM | free L-amino acid racemization |
2007-08-09 | Added | SYNONYM | amino acid metabolism |
2007-01-29 | Added | SYNONYM | amino acid metabolism |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2005-08-10 | Added | SYNONYM | free L-amino acid racemization |
2005-01-21 | Updated | DEFINITION | The chemical reactions involving amino acids, organic acids containing one or more amino substituents. |
2002-11-27 | Added | DEFINITION | The chemical reactions and physical changes involving amino acids, organic acids containing one or more amino substituents. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-05-30 | Deleted | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2023-12-26 | Added | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:0019752 (carboxylic acid metabolic process) |
2012-11-05 | Deleted | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-11-05 | Added | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2012-11-02 | Added | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-07-22 | Deleted | RELATION | is a GO:0044106 (cellular amine metabolic process) |
2010-11-19 | Deleted | RELATION | is a GO:0006519 (cellular amino acid and derivative metabolic process) |
2010-11-19 | Added | RELATION | is a GO:0044238 (primary metabolic process) |
2009-07-23 | Deleted | RELATION | is a GO:0009308 (amine metabolic process) |
2009-07-23 | Added | RELATION | is a GO:0044106 (cellular amine metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0009308 (amine metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0019752 (carboxylic acid metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0006519 (cellular amino acid and derivative metabolic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-02-28 | Deleted | XREF | MIPS_funcat:01.01 |
2019-05-04 | Added | XREF | MIPS_funcat:01.01 |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-02-24 | Added | SUBSET | goslim_prokaryote_ribbon |
2023-12-15 | Added | SUBSET | goslim_prokaryote |
2022-04-08 | Deleted | SUBSET | goslim_aspergillus |
2019-11-09 | Added | SUBSET | goslim_drosophila |
2018-07-13 | Added | SUBSET | goslim_pir |
2016-07-23 | Deleted | SUBSET | goslim_metagenomics |
2015-05-19 | Added | SUBSET | goslim_chembl |
2015-05-19 | Deleted | SUBSET | goslim_ChEMBL |
2015-05-11 | Added | SUBSET | goslim_ChEMBL |
2013-04-18 | Updated | SUBSET | goslim_aspergillus |
2013-04-18 | Updated | SUBSET | goslim_yeast |
2013-04-18 | Updated | SUBSET | goslim_pombe |
2013-04-18 | Updated | SUBSET | goslim_generic |
2013-04-18 | Updated | SUBSET | goslim_metagenomics |
2012-02-17 | Added | SUBSET | goslim_metagenomics |
2011-11-05 | Added | SUBSET | goslim_aspergillus |
2011-08-14 | Added | SUBSET | goslim_yeast |
2010-12-05 | Added | SUBSET | goslim_generic |
2010-11-19 | Added | SECONDARY | GO:0006519 (cellular amino acid and derivative metabolic process) |
2009-05-11 | Added | SUBSET | goslim_pombe |
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