This term is obsolete.

GO:0006520 JSON

amino acid metabolic process

Biological Process

Definition (GO:0006520 GONUTS page)

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.

Secondary IDs

GO:0006519

14,674,394 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
cellular amino acid metabolic process exact
cellular amino acid metabolism exact
cellular amino acid and derivative metabolic process related
amino acid and derivative metabolism related

Ancestor Chart

Ancestor chart for GO:0006520
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006520

Child Term Relationship to
GO:0006520
regulation of amino acid metabolic process
regulates
aromatic amino acid metabolic process
is_a
amino acid catabolic process
is_a
non-proteinogenic amino acid metabolic process
is_a
branched-chain amino acid metabolic process
is_a
negative regulation of amino acid metabolic process
negatively_regulates
amino acid biosynthetic process
is_a
diaminopimelate metabolic process
is_a
proteinogenic amino acid metabolic process
is_a
nicotianamine metabolic process
is_a

Cross-references

Database ID Description
InterPro IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site
InterPro IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site
InterPro IPR000796 Aspartate/other aminotransferase
InterPro IPR001342 Homoserine dehydrogenase, catalytic
InterPro IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase
InterPro IPR005958 Tyrosine/nicotianamine aminotransferase
InterPro IPR006033 Type I L-asparaginase family
InterPro IPR006095 Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase
InterPro IPR006096 Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal
InterPro IPR006097 Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_input_or_output CHEBI CHEBI:35238 amino-acid zwitterion

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0018367 obsolete free L-amino acid racemization consider GO:0006520
GO:0019794 obsolete nonprotein amino acid metabolic process replaced_by GO:0006520

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0006520 based on ALL annotations
The top 100 of 2,048 co-occurring terms
Co-occurring Term PR S% #Together #Compared
amino acid metabolic process
337.87 100.00 586,483 586,483
pyridoxal phosphate binding
44.83 11.05 233,643 1,760,728
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
225.70 10.24 63,291 94,746
amino acid binding
173.27 9.58 61,785 120,477
transaminase activity
42.32 9.19 150,490 1,201,488
threonine biosynthetic process
84.02 7.36 55,555 223,392
carboxylic acid metabolic process
54.20 7.33 69,753 434,793
threonine catabolic process
111.00 7.29 50,214 152,847
aspartate carbamoyltransferase activity
206.06 7.09 43,528 71,370
glutamate dehydrogenase [NAD(P)+] activity
337.66 6.73 39,485 39,509
Totals 3584705 66862858
No co-occurrence statistics for GO:0006520 based on MANUAL annotations
The top 100 of 345 co-occurring terms
Co-occurring Term PR S% #Together #Compared
amino acid metabolic process
1,279.72 100.00 1,103 1,103
transaminase activity
938.38 56.13 778 1,061
amine-lyase activity
1,271.36 13.77 152 153
pyridoxine biosynthetic process
1,007.86 13.29 152 193
pyridoxal phosphate biosynthetic process
587.67 11.86 152 331
aromatic-amino-acid transaminase activity
922.59 5.50 62 86
L-aspartate:2-oxoglutarate aminotransferase activity
197.58 4.46 65 421
1-aminocyclopropane-1-carboxylate synthase activity
846.59 3.82 43 65
amide biosynthetic process
1,279.72 3.81 42 42
amide catabolic process
404.12 3.52 42 133
Totals 2956 38168

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_pir 438
goslim_generic 141
goslim_pombe 61
goslim_yeast 163
goslim_prokaryote 97
goslim_chembl 296
goslim_drosophila 173
goslim_prokaryote_ribbon 49

Change Log

Timestamp Action Category Detail
2024-05-30 Deleted RELATION is a GO:0071704 (obsolete organic substance metabolic process)
2024-02-24 Added SUBSET goslim_prokaryote_ribbon
2023-12-26 Added RELATION is a GO:0071704 (obsolete organic substance metabolic process)
2023-12-26 Deleted RELATION is a GO:0019752 (carboxylic acid metabolic process)
2023-12-26 Deleted RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2023-12-15 Added SUBSET goslim_prokaryote
2022-08-26 Added SYNONYM cellular amino acid metabolic process
2022-08-26 Added SYNONYM cellular amino acid and derivative metabolic process
2022-08-26 Added SYNONYM amino acid and derivative metabolism
2022-08-26 Deleted DEFINITION The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
Timestamp Action Category Detail
2022-08-26 Updated TERM amino acid metabolic process
2009-06-16 Updated TERM cellular amino acid metabolic process
2007-01-15 Updated TERM amino acid metabolic process
2002-02-06 Updated TERM amino acid metabolism
2001-04-03 Updated TERM amino acid metabolism
2001-03-30 Added TERM amino acid metabolism
Timestamp Action Category Detail
2022-08-26 Added SYNONYM cellular amino acid metabolic process
2022-08-26 Added SYNONYM cellular amino acid and derivative metabolic process
2022-08-26 Added SYNONYM amino acid and derivative metabolism
2022-08-26 Deleted DEFINITION The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
2022-08-26 Deleted SYNONYM amino acid metabolic process
2022-08-26 Deleted SYNONYM cellular amino acid and derivative metabolic process
2022-08-26 Deleted SYNONYM amino acid and derivative metabolism
2022-08-26 Added DEFINITION The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
2010-11-19 Deleted DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.
2010-11-19 Added DEFINITION The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
2010-11-19 Added SYNONYM cellular amino acid and derivative metabolic process
2010-11-19 Added SYNONYM amino acid and derivative metabolism
2010-03-03 Added SYNONYM amino acid metabolic process
2009-06-16 Deleted SYNONYM amino acid metabolism
2009-06-16 Added SYNONYM cellular amino acid metabolism
2008-05-13 Added DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.
2007-10-06 Deleted SYNONYM free L-amino acid racemization
2007-08-09 Added SYNONYM amino acid metabolism
2007-08-09 Added SYNONYM free L-amino acid racemization
2007-08-09 Deleted SYNONYM amino acid metabolism
2007-08-09 Deleted SYNONYM free L-amino acid racemization
2007-01-29 Added SYNONYM amino acid metabolism
2006-05-04 Updated DEFINITION The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.
2005-08-10 Added SYNONYM free L-amino acid racemization
2005-01-21 Updated DEFINITION The chemical reactions involving amino acids, organic acids containing one or more amino substituents.
2002-11-27 Added DEFINITION The chemical reactions and physical changes involving amino acids, organic acids containing one or more amino substituents.
Timestamp Action Category Detail
2024-05-30 Deleted RELATION is a GO:0071704 (obsolete organic substance metabolic process)
2023-12-26 Added RELATION is a GO:0071704 (obsolete organic substance metabolic process)
2023-12-26 Deleted RELATION is a GO:0019752 (carboxylic acid metabolic process)
2023-12-26 Deleted RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2012-11-05 Added RELATION is a GO:1901564 (obsolete organonitrogen compound metabolic process)
2012-11-05 Deleted RELATION is a GO:0006807 (obsolete nitrogen compound metabolic process)
2012-11-02 Added RELATION is a GO:0006807 (obsolete nitrogen compound metabolic process)
2012-07-22 Deleted RELATION is a GO:0044106 (cellular amine metabolic process)
2010-11-19 Added RELATION is a GO:0044238 (primary metabolic process)
2010-11-19 Deleted RELATION is a GO:0006519 (cellular amino acid and derivative metabolic process)
2009-07-23 Deleted RELATION is a GO:0009308 (amine metabolic process)
2009-07-23 Added RELATION is a GO:0044106 (cellular amine metabolic process)
2008-04-01 Updated RELATION is a GO:0009308 (amine metabolic process)
2008-04-01 Updated RELATION is a GO:0019752 (carboxylic acid metabolic process)
2008-04-01 Updated RELATION is a GO:0006519 (cellular amino acid and derivative metabolic process)
Timestamp Action Category Detail
2020-02-28 Deleted XREF MIPS_funcat:01.01
2019-05-04 Added XREF MIPS_funcat:01.01
Timestamp Action Category Detail
2024-02-24 Added SUBSET goslim_prokaryote_ribbon
2023-12-15 Added SUBSET goslim_prokaryote
2022-04-08 Deleted SUBSET goslim_aspergillus
2019-11-09 Added SUBSET goslim_drosophila
2018-07-13 Added SUBSET goslim_pir
2016-07-23 Deleted SUBSET goslim_metagenomics
2015-05-19 Added SUBSET goslim_chembl
2015-05-19 Deleted SUBSET goslim_ChEMBL
2015-05-11 Added SUBSET goslim_ChEMBL
2013-04-18 Updated SUBSET goslim_pombe
2013-04-18 Updated SUBSET goslim_aspergillus
2013-04-18 Updated SUBSET goslim_generic
2013-04-18 Updated SUBSET goslim_yeast
2013-04-18 Updated SUBSET goslim_metagenomics
2012-02-17 Added SUBSET goslim_metagenomics
2011-11-05 Added SUBSET goslim_aspergillus
2011-08-14 Added SUBSET goslim_yeast
2010-12-05 Added SUBSET goslim_generic
2010-11-19 Added SECONDARY GO:0006519 (cellular amino acid and derivative metabolic process)
2009-05-11 Added SUBSET goslim_pombe
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