GO:0006520
JSON
amino acid metabolic process
Biological Process
Definition (GO:0006520 GONUTS page)
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.
Secondary IDs
GO:0006519
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
cellular amino acid metabolic process | exact |
cellular amino acid metabolism | exact |
cellular amino acid and derivative metabolic process | related |
amino acid and derivative metabolism | related |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006520
Child Term | Relationship to GO:0006520 |
---|---|
regulation of amino acid metabolic process
|
regulates |
diaminopimelate metabolic process
|
is_a |
negative regulation of amino acid metabolic process
|
negatively_regulates |
amino acid catabolic process
|
is_a |
non-proteinogenic amino acid metabolic process
|
is_a |
aromatic amino acid metabolic process
|
is_a |
branched-chain amino acid metabolic process
|
is_a |
amino acid activation
|
is_a |
proteinogenic amino acid metabolic process
|
is_a |
amino acid biosynthetic process
|
is_a |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR000319 | Aspartate-semialdehyde dehydrogenase, conserved site |
InterPro | IPR000634 | Serine/threonine dehydratase, pyridoxal-phosphate-binding site |
InterPro | IPR000796 | Aspartate/other aminotransferase |
InterPro | IPR001342 | Homoserine dehydrogenase, catalytic |
InterPro | IPR001597 | Aromatic amino acid beta-eliminating lyase/threonine aldolase |
InterPro | IPR005958 | Tyrosine/nicotianamine aminotransferase |
InterPro | IPR006033 | Type I L-asparaginase family |
InterPro | IPR006095 | Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase |
InterPro | IPR006096 | Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal |
InterPro | IPR006097 | Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_input_or_output | CHEBI | CHEBI:35238 | amino-acid zwitterion |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0018367 | obsolete free L-amino acid racemization | consider GO:0006520 |
GO:0019794 | obsolete nonprotein amino acid metabolic process | replaced_by GO:0006520 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006520 based on ALL annotations
The top 100 of 2,048 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
|
337.87 | 100.00 | 586,483 | 586,483 |
|
44.83 | 11.05 | 233,643 | 1,760,728 |
|
225.70 | 10.24 | 63,291 | 94,746 |
|
173.27 | 9.58 | 61,785 | 120,477 |
|
42.32 | 9.19 | 150,490 | 1,201,488 |
|
84.02 | 7.36 | 55,555 | 223,392 |
|
54.20 | 7.33 | 69,753 | 434,793 |
|
111.00 | 7.29 | 50,214 | 152,847 |
|
206.06 | 7.09 | 43,528 | 71,370 |
|
337.66 | 6.73 | 39,485 | 39,509 |
Totals | 3584705 | 66862858 |
No co-occurrence statistics for GO:0006520 based on MANUAL annotations
The top 100 of 345 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
|
1,279.72 | 100.00 | 1,103 | 1,103 |
|
938.38 | 56.13 | 778 | 1,061 |
|
1,271.36 | 13.77 | 152 | 153 |
|
1,007.86 | 13.29 | 152 | 193 |
|
587.67 | 11.86 | 152 | 331 |
|
922.59 | 5.50 | 62 | 86 |
|
197.58 | 4.46 | 65 | 421 |
|
846.59 | 3.82 | 43 | 65 |
|
1,279.72 | 3.81 | 42 | 42 |
|
404.12 | 3.52 | 42 | 133 |
Totals | 2956 | 38168 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_pir | 438 |
goslim_generic | 141 |
goslim_pombe | 61 |
goslim_yeast | 163 |
goslim_prokaryote | |
goslim_chembl | 296 |
goslim_drosophila | 173 |
goslim_prokaryote_ribbon | 49 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-05-30 | Deleted | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2024-02-24 | Added | SUBSET | goslim_prokaryote_ribbon |
2023-12-26 | Added | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:0019752 (carboxylic acid metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2023-12-15 | Added | SUBSET | goslim_prokaryote |
2022-08-26 | Deleted | SYNONYM | cellular amino acid and derivative metabolic process |
2022-08-26 | Deleted | SYNONYM | amino acid and derivative metabolism |
2022-08-26 | Deleted | SYNONYM | amino acid metabolic process |
2022-08-26 | Added | SYNONYM | cellular amino acid and derivative metabolic process |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-08-26 | Updated | TERM | amino acid metabolic process |
2009-06-16 | Updated | TERM | cellular amino acid metabolic process |
2007-01-15 | Updated | TERM | amino acid metabolic process |
2002-02-06 | Updated | TERM | amino acid metabolism |
2001-04-03 | Updated | TERM | amino acid metabolism |
2001-03-30 | Added | TERM | amino acid metabolism |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-08-26 | Deleted | SYNONYM | cellular amino acid and derivative metabolic process |
2022-08-26 | Deleted | SYNONYM | amino acid and derivative metabolism |
2022-08-26 | Deleted | SYNONYM | amino acid metabolic process |
2022-08-26 | Added | SYNONYM | cellular amino acid and derivative metabolic process |
2022-08-26 | Added | SYNONYM | cellular amino acid metabolic process |
2022-08-26 | Added | DEFINITION | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups. |
2022-08-26 | Deleted | DEFINITION | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. |
2022-08-26 | Added | SYNONYM | amino acid and derivative metabolism |
2010-11-19 | Deleted | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2010-11-19 | Added | DEFINITION | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. |
2010-11-19 | Added | SYNONYM | amino acid and derivative metabolism |
2010-11-19 | Added | SYNONYM | cellular amino acid and derivative metabolic process |
2010-03-03 | Added | SYNONYM | amino acid metabolic process |
2009-06-16 | Deleted | SYNONYM | amino acid metabolism |
2009-06-16 | Added | SYNONYM | cellular amino acid metabolism |
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2007-10-06 | Deleted | SYNONYM | free L-amino acid racemization |
2007-08-09 | Deleted | SYNONYM | amino acid metabolism |
2007-08-09 | Deleted | SYNONYM | free L-amino acid racemization |
2007-08-09 | Added | SYNONYM | amino acid metabolism |
2007-08-09 | Added | SYNONYM | free L-amino acid racemization |
2007-01-29 | Added | SYNONYM | amino acid metabolism |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents. |
2005-08-10 | Added | SYNONYM | free L-amino acid racemization |
2005-01-21 | Updated | DEFINITION | The chemical reactions involving amino acids, organic acids containing one or more amino substituents. |
2002-11-27 | Added | DEFINITION | The chemical reactions and physical changes involving amino acids, organic acids containing one or more amino substituents. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-05-30 | Deleted | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2023-12-26 | Added | RELATION | is a GO:0071704 (obsolete organic substance metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:0019752 (carboxylic acid metabolic process) |
2023-12-26 | Deleted | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2012-11-05 | Deleted | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-11-05 | Added | RELATION | is a GO:1901564 (obsolete organonitrogen compound metabolic process) |
2012-11-02 | Added | RELATION | is a GO:0006807 (obsolete nitrogen compound metabolic process) |
2012-07-22 | Deleted | RELATION | is a GO:0044106 (cellular amine metabolic process) |
2010-11-19 | Added | RELATION | is a GO:0044238 (primary metabolic process) |
2010-11-19 | Deleted | RELATION | is a GO:0006519 (cellular amino acid and derivative metabolic process) |
2009-07-23 | Added | RELATION | is a GO:0044106 (cellular amine metabolic process) |
2009-07-23 | Deleted | RELATION | is a GO:0009308 (amine metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0019752 (carboxylic acid metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0009308 (amine metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0006519 (cellular amino acid and derivative metabolic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-02-28 | Deleted | XREF | MIPS_funcat:01.01 |
2019-05-04 | Added | XREF | MIPS_funcat:01.01 |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-02-24 | Added | SUBSET | goslim_prokaryote_ribbon |
2023-12-15 | Added | SUBSET | goslim_prokaryote |
2022-04-08 | Deleted | SUBSET | goslim_aspergillus |
2019-11-09 | Added | SUBSET | goslim_drosophila |
2018-07-13 | Added | SUBSET | goslim_pir |
2016-07-23 | Deleted | SUBSET | goslim_metagenomics |
2015-05-19 | Added | SUBSET | goslim_chembl |
2015-05-19 | Deleted | SUBSET | goslim_ChEMBL |
2015-05-11 | Added | SUBSET | goslim_ChEMBL |
2013-04-18 | Updated | SUBSET | goslim_aspergillus |
2013-04-18 | Updated | SUBSET | goslim_yeast |
2013-04-18 | Updated | SUBSET | goslim_pombe |
2013-04-18 | Updated | SUBSET | goslim_generic |
2013-04-18 | Updated | SUBSET | goslim_metagenomics |
2012-02-17 | Added | SUBSET | goslim_metagenomics |
2011-11-05 | Added | SUBSET | goslim_aspergillus |
2011-08-14 | Added | SUBSET | goslim_yeast |
2010-12-05 | Added | SUBSET | goslim_generic |
2010-11-19 | Added | SECONDARY | GO:0006519 (cellular amino acid and derivative metabolic process) |
2009-05-11 | Added | SUBSET | goslim_pombe |
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