GO:0006935
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chemotaxis
Biological Process
Definition (GO:0006935 GONUTS page)
The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
taxis in response to chemical stimulus | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006935
Child Term | Relationship to GO:0006935 |
---|---|
negative regulation of chemotaxis
|
negatively_regulates |
chemotaxis to folate
|
is_a |
cell chemotaxis
|
is_a |
chemotaxis to cAMP
|
is_a |
chemotaxis to arachidonate
|
is_a |
regulation of chemotaxis
|
regulates |
aerotaxis
|
is_a |
redox taxis
|
is_a |
positive regulation of chemotaxis
|
positively_regulates |
chemotaxis to oxidizable substrate
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0006935 | chemotaxis | Never in Taxon | 451864 | Dikarya |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q94901 | 7227 | LARK_DROME | GO:0040011 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:12626480 | |
NOT-qualified manual | protein | Q9NFU0 | 7227 | FMR1_DROME | GO:0006935 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:12086644 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR000057 | CXC chemokine receptor 2 |
InterPro | IPR000090 | Flagellar motor switch protein FliG |
InterPro | IPR000174 | CXC chemokine receptor 1/2 |
InterPro | IPR000355 | Chemokine receptor family |
InterPro | IPR000673 | Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase |
InterPro | IPR001053 | CXC chemokine receptor 5 |
InterPro | IPR001172 | Flagellar motor switch FliN/Type III secretion HrcQb |
InterPro | IPR001355 | CXC chemokine receptor 1 |
InterPro | IPR001416 | Atypical chemokine receptor 3 |
InterPro | IPR001644 | C3a anaphylatoxin chemotactic receptor |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006935 based on ALL annotations
The top 100 of 3,261 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
chemotaxis
|
340.24 | 100.00 | 572,937 | 572,937 |
transmembrane signaling receptor activity
|
186.71 | 23.16 | 163,936 | 298,744 |
archaeal or bacterial-type flagellum-dependent cell motility
|
228.85 | 16.63 | 103,699 | 154,176 |
bacterial-type flagellum-dependent cell motility
|
99.25 | 11.80 | 94,745 | 324,800 |
signal transduction
|
40.47 | 10.59 | 281,725 | 2,368,833 |
bacterial-type flagellum basal body
|
90.59 | 10.06 | 79,753 | 299,533 |
bacterial-type flagellum-dependent swarming motility
|
140.83 | 9.51 | 62,997 | 152,200 |
bacterial-type flagellum
|
60.53 | 8.04 | 73,228 | 411,600 |
protein-glutamate methylesterase activity
|
333.21 | 7.74 | 44,429 | 45,367 |
cytoskeletal motor activity
|
61.52 | 7.50 | 65,031 | 359,662 |
Totals | 2991531 | 163716083 |
No co-occurrence statistics for GO:0006935 based on MANUAL annotations
The top 100 of 1,871 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
chemotaxis
|
1,877.61 | 100.00 | 688 | 688 |
chemokine activity
|
237.26 | 6.49 | 81 | 641 |
rough endoplasmic reticulum membrane
|
1,202.85 | 5.77 | 41 | 64 |
neuronal signal transduction
|
1,132.09 | 5.73 | 41 | 68 |
C-C chemokine receptor activity
|
224.58 | 5.36 | 61 | 510 |
chemokine-mediated signaling pathway
|
194.45 | 5.15 | 64 | 618 |
eosinophil chemotaxis
|
312.94 | 4.93 | 45 | 270 |
C-C chemokine binding
|
223.63 | 4.91 | 53 | 445 |
cell chemotaxis
|
142.07 | 4.65 | 74 | 978 |
positive regulation of cytosolic calcium ion concentration
|
121.56 | 4.40 | 83 | 1,282 |
Totals | 3474 | 51010 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:451864 (Dikarya) |
2020-02-28 | Deleted | XREF | MIPS_funcat:34.11.03.03 |
2019-05-04 | Added | XREF | MIPS_funcat:34.11.03.03 |
2016-07-23 | Deleted | SUBSET | goslim_metagenomics |
2014-12-20 | Deleted | RELATION | is a GO:0042221 (response to chemical) |
2014-12-20 | Added | RELATION | part of GO:0042221 (response to chemical) |
2013-04-18 | Updated | SUBSET | goslim_metagenomics |
2012-02-17 | Added | SUBSET | goslim_metagenomics |
2009-03-02 | Added | XREF | Wikipedia:Chemotaxis |
2008-05-13 | Added | DEFINITION | The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
Timestamp | Action | Category | Detail |
---|---|---|---|
2002-02-06 | Updated | TERM | chemotaxis |
2001-04-03 | Updated | TERM | chemotaxis |
2001-03-30 | Added | TERM | chemotaxis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
2008-05-12 | Deleted | DEFINITION | The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
2007-08-09 | Deleted | SYNONYM | taxis in response to chemical stimulus |
2007-08-09 | Added | SYNONYM | taxis in response to chemical stimulus |
2007-01-09 | Updated | DEFINITION | The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
2005-12-26 | Added | SYNONYM | taxis in response to chemical stimulus |
2003-03-26 | Updated | DEFINITION | The directed movement of a motile cell or organism in response to a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
2002-11-27 | Added | DEFINITION | Directed movement of a motile cell or organism in response to a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-12-20 | Deleted | RELATION | is a GO:0042221 (response to chemical) |
2014-12-20 | Added | RELATION | part of GO:0042221 (response to chemical) |
2008-04-01 | Updated | RELATION | is a GO:0042330 (taxis) |
2008-04-01 | Updated | RELATION | is a GO:0042221 (response to chemical) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-02-28 | Deleted | XREF | MIPS_funcat:34.11.03.03 |
2019-05-04 | Added | XREF | MIPS_funcat:34.11.03.03 |
2009-03-02 | Added | XREF | Wikipedia:Chemotaxis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:451864 (Dikarya) |
2016-07-23 | Deleted | SUBSET | goslim_metagenomics |
2013-04-18 | Updated | SUBSET | goslim_metagenomics |
2012-02-17 | Added | SUBSET | goslim_metagenomics |
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