This term is obsolete.

GO:0009536 JSON

plastid

Cellular Component

Definition (GO:0009536 GONUTS page)

Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

3,472,879 annotations

Ancestor Chart

Ancestor chart for GO:0009536
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0009536

Child Term Relationship to
GO:0009536
plastid nucleoid
part_of
plastid ribosome
part_of
amyloplast
is_a
chloroplast
is_a
plastid chromosome packaging
occurs_in
plastid ADPG pyrophosphorylase complex
part_of
plastid envelope
part_of
plastid outer membrane
part_of
chromoplast
is_a
plastid chromosome
part_of

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0009536 plastid Never in Taxon 2 Bacteria
GO:0009536 plastid Never in Taxon 2157 Archaea
GO:0009536 plastid Never in Taxon 28009 Choanoflagellata
GO:0009536 plastid Never in Taxon 33208 Metazoa
GO:0009536 plastid Never in Taxon 4751 Fungi
GO:0009536 plastid Never in Taxon 554915 Amoebozoa
GO:0009536 plastid Only in Taxon 131567 cellular organisms

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0D1E8X3 5270 A0A0D1E8X3_MYCMD GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A0G2JZ79 10116 SIR1_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1L8G9S0 8355 A0A1L8G9S0_XENLA GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A1S4L3K3 6945 A0A1S4L3K3_IXOSC GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A2K5ATM2 6239 A0A2K5ATM2_CAEEL GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2K5ATM9 6239 A0A2K5ATM9_CAEEL GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2K5ATP6 6239 A0A2K5ATP6_CAEEL GO:0005737 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033

Cross-references

Database ID Description
InterPro IPR034563 Protein PALE CRESS
UniProtKB-KW KW-0934 Plastid
UniProtKB-SubCell SL-0209 Plastid
Wikipedia Plastid

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0044435 obsolete plastid part consider GO:0009536

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0009536 based on ALL annotations
The top 100 of 2,939 co-occurring terms
Co-occurring Term PR S% #Together #Compared
519.32 100.00 381,567 381,567
97.42 14.22 141,316 753,300
91.07 12.65 119,223 679,866
177.46 11.09 53,842 157,562
125.72 10.25 57,621 238,025
111.53 10.04 60,571 282,029
63.39 8.88 93,774 768,223
49.58 8.52 168,418 1,763,901
161.85 7.92 36,605 117,454
307.62 7.68 30,950 52,250
Totals 2937340 96090048
No co-occurrence statistics for GO:0009536 based on MANUAL annotations
The top 100 of 1,149 co-occurring terms
Co-occurring Term PR S% #Together #Compared
864.91 100.00 1,632 1,632
135.73 7.12 188 1,198
248.43 4.42 81 282
46.58 3.46 144 2,674
67.27 3.36 91 1,170
80.39 3.29 79 850
192.56 3.21 59 265
691.93 3.16 52 65
167.82 2.81 52 268
26.25 2.72 342 11,269
Totals 4579 349382

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_pir 438
goslim_plant 97
goslim_generic 141
goslim_chembl 296
goslim_plant_ribbon 62

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2024-03-21 Added SUBSET goslim_plant_ribbon
2020-02-28 Deleted XREF MIPS_funcat:70.26
2019-09-12 Added RELATION part of GO:0005737 (cytoplasm)
2019-09-12 Deleted RELATION is a GO:0044444 (obsolete cytoplasmic part)
2019-05-04 Added XREF MIPS_funcat:70.26
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:28009 (Choanoflagellata)
Timestamp Action Category Detail
2002-02-06 Updated TERM plastid
2001-04-03 Updated TERM plastid
2001-03-30 Added TERM plastid
Timestamp Action Category Detail
2008-05-13 Added DEFINITION Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
2008-05-12 Deleted DEFINITION Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
2003-04-17 Updated DEFINITION Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
2002-11-27 Updated DEFINITION Any member of a family of organelles found in the cytoplasm of eukaryotic plants, all of which contain DNA, are bounded by a double membrane and develop from a common type, the proplastid.
2001-08-06 Added DEFINITION Any member of a family of oranelles found in the cytoplasm of eukaryotic plants, all of which contain DNA, are bounded by a double membrane and develop from a common type, the proplastid.
Timestamp Action Category Detail
2019-09-12 Added RELATION part of GO:0005737 (cytoplasm)
2019-09-12 Deleted RELATION is a GO:0044444 (obsolete cytoplasmic part)
2015-11-15 Added RELATION has part GO:0097693 (ocelloid)
2008-04-01 Updated RELATION is a GO:0044444 (obsolete cytoplasmic part)
2008-04-01 Updated RELATION is a GO:0043231 (intracellular membrane-bounded organelle)
Timestamp Action Category Detail
2020-02-28 Deleted XREF MIPS_funcat:70.26
2019-05-04 Added XREF MIPS_funcat:70.26
2009-02-08 Added XREF Wikipedia:Plastid
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2024-03-21 Added SUBSET goslim_plant_ribbon
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
2018-02-01 Updated CONSTRAINT never_in_taxon NCBITaxon:28009 (Choanoflagellata)
2015-12-09 Added CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
2015-12-09 Added CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
2015-12-09 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2015-12-09 Added CONSTRAINT never_in_taxon NCBITaxon:28009 (Choanoflagellata)
2015-12-09 Added CONSTRAINT never_in_taxon NCBITaxon:2157 (Archaea)
2015-12-09 Added CONSTRAINT never_in_taxon NCBITaxon:2 (Bacteria)
2015-05-19 Deleted SUBSET goslim_ChEMBL
2015-05-19 Added SUBSET goslim_chembl
2015-05-11 Added SUBSET goslim_ChEMBL
2013-04-18 Updated SUBSET goslim_plant
2013-04-18 Updated SUBSET goslim_pir
2013-04-18 Updated SUBSET goslim_generic
2008-06-09 Added SUBSET goslim_generic
2008-06-09 Added SUBSET goslim_pir
2008-06-09 Added SUBSET goslim_plant
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