GO:0017000
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antibiotic biosynthetic process
Biological Process
Definition (GO:0017000 GONUTS page)
The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
| Synonym | Type |
|---|---|
| antibiotic anabolism | exact |
| antibiotic biosynthesis | exact |
| antibiotic formation | exact |
| antibiotic synthesis | exact |
Ancestor Chart
Ancestor chart for GO:0017000
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0017000
| Child Term | Relationship to GO:0017000 |
|---|---|
|
phenazine biosynthetic process
|
is_a |
|
novobiocin biosynthetic process
|
is_a |
|
tetracycline biosynthetic process
|
is_a |
|
aminoglycoside antibiotic biosynthetic process
|
is_a |
|
macrolide biosynthetic process
|
is_a |
|
mycophenolic acid biosynthetic process
|
is_a |
|
beta-lactam antibiotic biosynthetic process
|
is_a |
|
puromycin biosynthetic process
|
is_a |
|
enniatin biosynthetic process
|
is_a |
|
peptide antibiotic biosynthetic process
|
is_a |
Cross-references
| Database | ID | Description |
|---|---|---|
| InterPro | IPR002692 | Penicillin/GL-7-ACA/AHL/aculeacin-A acylase |
| InterPro | IPR004964 | Phenazine biosynthesis protein A/B |
| InterPro | IPR017657 | L-lysine 6-transaminase |
| InterPro | IPR034386 | 2-Deoxy-scyllo-inosamine dehydrogenase (BtrN-like) |
| InterPro | IPR034529 | Cytidylyl-2-hydroxyethylphosphonate methyltransferase fom3-like |
| InterPro | IPR035872 | 2-epi-5-epi-valiolone synthase-like |
| InterPro | IPR035873 | Phosphonoacetaldehyde reductase |
| InterPro | IPR041013 | Allene oxide cyclase barrel-like domain |
| UniProtKB-KW | KW-0045 | Antibiotic biosynthesis |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0017000 based on ALL annotations
The top 100 of 1,047 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
antibiotic biosynthetic process
|
1,275.23 | 100.00 | 155,388 | 155,388 |
|
phosphopantetheine binding
|
244.10 | 12.62 | 41,972 | 219,273 |
|
monocarboxylic acid biosynthetic process
|
1,275.14 | 9.31 | 14,474 | 14,475 |
|
fatty acid synthase activity
|
235.19 | 8.65 | 21,773 | 118,055 |
|
secondary metabolite biosynthetic process
|
151.81 | 8.33 | 33,718 | 283,245 |
|
amino acid activation for nonribosomal peptide biosynthetic process
|
194.38 | 7.43 | 19,678 | 129,097 |
|
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
|
109.20 | 6.13 | 27,550 | 321,721 |
|
UDP-glycosyltransferase activity
|
138.05 | 5.49 | 15,567 | 143,801 |
|
3-oxoacyl-[acyl-carrier-protein] synthase activity
|
97.58 | 5.04 | 20,012 | 261,537 |
|
macrolide biosynthetic process
|
1,262.84 | 4.39 | 6,832 | 6,899 |
| Totals | 735617 | 129976166 | ||
No co-occurrence statistics for GO:0017000 based on MANUAL annotations
The top 72 of 72 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
antibiotic biosynthetic process
|
12,381.87 | 100.00 | 114 | 114 |
|
scyllo-inositol dehydrogenase (NADP+) activity
|
11,693.99 | 14.78 | 17 | 18 |
|
daunorubicin biosynthetic process
|
4,952.75 | 6.35 | 8 | 20 |
|
lactone biosynthetic process
|
8,254.58 | 5.13 | 6 | 9 |
|
intramolecular lyase activity
|
10,318.22 | 4.35 | 5 | 6 |
|
doxorubicin metabolic process
|
1,179.23 | 4.21 | 8 | 84 |
|
pyridoxal binding
|
4,127.29 | 2.50 | 3 | 9 |
|
intramolecular oxidoreductase activity, transposing C=C bonds
|
2,476.37 | 2.38 | 3 | 15 |
|
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
|
371.46 | 1.95 | 6 | 200 |
|
amidine-lyase activity
|
12,381.87 | 1.75 | 2 | 2 |
| Totals | 322 | 232764 | ||
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
| GO slim name | Total Number of Terms in Slim |
|---|---|
| goslim_metagenomics | 111 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2023-01-08 | Added | RELATION | is a GO:0009058 (biosynthetic process) |
| 2023-01-08 | Deleted | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| 2018-02-11 | Deleted | RELATION | is a GO:0009403 (toxin biosynthetic process) |
| 2018-02-11 | Added | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| 2017-11-29 | Deleted | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| 2017-11-29 | Added | RELATION | is a GO:0009403 (toxin biosynthetic process) |
| 2016-07-23 | Added | SUBSET | goslim_metagenomics |
| 2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| 2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| 2008-04-01 | Updated | RELATION | is a GO:0016999 (antibiotic metabolic process) |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2007-01-15 | Updated | TERM | antibiotic biosynthetic process |
| 2001-04-03 | Added | TERM | antibiotic biosynthesis |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| 2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| 2007-08-09 | Deleted | SYNONYM | antibiotic synthesis |
| 2007-08-09 | Deleted | SYNONYM | antibiotic formation |
| 2007-08-09 | Deleted | SYNONYM | antibiotic anabolism |
| 2007-08-09 | Added | SYNONYM | antibiotic synthesis |
| 2007-08-09 | Deleted | SYNONYM | antibiotic biosynthesis |
| 2007-08-09 | Added | SYNONYM | antibiotic formation |
| 2007-08-09 | Added | SYNONYM | antibiotic biosynthesis |
| 2007-08-09 | Added | SYNONYM | antibiotic anabolism |
| 2007-01-15 | Added | SYNONYM | antibiotic biosynthesis |
| 2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| 2006-04-29 | Updated | DEFINITION | The formation from simpler components of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| 2005-08-10 | Added | SYNONYM | antibiotic anabolism |
| 2005-08-10 | Added | SYNONYM | antibiotic formation |
| 2005-08-10 | Added | SYNONYM | antibiotic synthesis |
| 2002-11-27 | Added | DEFINITION | The formation from simpler components of antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms. |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2023-01-08 | Added | RELATION | is a GO:0009058 (biosynthetic process) |
| 2023-01-08 | Deleted | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| 2018-02-11 | Deleted | RELATION | is a GO:0009403 (toxin biosynthetic process) |
| 2018-02-11 | Added | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| 2017-11-29 | Deleted | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| 2017-11-29 | Added | RELATION | is a GO:0009403 (toxin biosynthetic process) |
| 2008-04-01 | Updated | RELATION | is a GO:0016999 (antibiotic metabolic process) |
| 2008-04-01 | Updated | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
| Timestamp | Action | Category | Detail |
|---|
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2016-07-23 | Added | SUBSET | goslim_metagenomics |
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