GO:0018057
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peptidyl-lysine oxidation
Biological Process
Definition (GO:0018057 GONUTS page)
The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens.
Restrictions
This term should not be used for direct annotation.
Ancestor Chart
Ancestor chart for GO:0018057
Cross-references
Database | ID | Description |
---|---|---|
RESID | AA0121 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0018057 based on ALL annotations
The top 84 of 84 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
peptidyl-lysine oxidation
|
9,435,946.00 | 100.00 | 21 | 21 |
regulation of receptor binding
|
9,435,946.00 | 4.76 | 1 | 1 |
negative regulation of stem cell population maintenance
|
331,085.80 | 3.38 | 10 | 285 |
ascending aorta development
|
288,855.50 | 2.59 | 3 | 98 |
regulation of platelet-derived growth factor receptor-beta signaling pathway
|
288,855.50 | 2.59 | 3 | 98 |
descending aorta development
|
283,078.38 | 2.54 | 3 | 100 |
protein oxidation
|
449,330.75 | 2.44 | 1 | 21 |
fibronectin fibril organization
|
150,975.14 | 1.50 | 4 | 250 |
peptide cross-linking
|
196,582.20 | 1.47 | 1 | 48 |
negative regulation of T-helper 17 cell lineage commitment
|
80,305.93 | 0.82 | 4 | 470 |
Totals | 583 | 159511934 |
No co-occurrence statistics for GO:0018057 based on MANUAL annotations
The top 77 of 77 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
peptidyl-lysine oxidation
|
67,215.86 | 100.00 | 21 | 21 |
negative regulation of stem cell population maintenance
|
11,202.64 | 14.08 | 10 | 60 |
protein-lysine 6-oxidase activity
|
8,673.01 | 12.82 | 20 | 155 |
fibronectin fibril organization
|
17,924.23 | 12.50 | 4 | 15 |
negative regulation of T-helper 17 cell lineage commitment
|
10,754.54 | 9.52 | 4 | 25 |
ascending aorta development
|
67,215.86 | 9.52 | 2 | 2 |
regulation of platelet-derived growth factor receptor-beta signaling pathway
|
67,215.86 | 9.52 | 2 | 2 |
platelet-derived growth factor receptor-beta signaling pathway
|
8,401.98 | 8.93 | 5 | 40 |
descending aorta development
|
33,607.93 | 8.70 | 2 | 4 |
positive regulation of chondrocyte differentiation
|
4,942.34 | 6.80 | 10 | 136 |
Totals | 430 | 759653 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-07-26 | Added | SUBSET | gocheck_obsoletion_candidate |
2024-07-26 | Deleted | SUBSET | gocheck_do_not_annotate |
2023-06-13 | Added | SUBSET | gocheck_do_not_annotate |
2008-05-13 | Added | DEFINITION | The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens. |
2008-05-12 | Deleted | DEFINITION | The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens. |
2008-04-01 | Updated | RELATION | is a GO:0018205 (peptidyl-lysine modification) |
2008-04-01 | Updated | RELATION | is a GO:0018158 (protein oxidation) |
2005-02-24 | Added | XREF | RESID:AA0121 |
2002-11-27 | Added | DEFINITION | The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens. |
2001-10-01 | Added | TERM | peptidyl-lysine oxidation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2001-10-01 | Added | TERM | peptidyl-lysine oxidation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens. |
2008-05-12 | Deleted | DEFINITION | The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens. |
2002-11-27 | Added | DEFINITION | The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0018205 (peptidyl-lysine modification) |
2008-04-01 | Updated | RELATION | is a GO:0018158 (protein oxidation) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-02-24 | Added | XREF | RESID:AA0121 |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-07-26 | Added | SUBSET | gocheck_obsoletion_candidate |
2024-07-26 | Deleted | SUBSET | gocheck_do_not_annotate |
2023-06-13 | Added | SUBSET | gocheck_do_not_annotate |
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