GO:0019354
JSON
siroheme biosynthetic process
Biological Process
Definition (GO:0019354 GONUTS page)
The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
siroheme formation | exact |
siroheme synthase activity | related |
siroheme anabolism | exact |
sirohaem biosynthetic process | exact |
siroheme biosynthesis | exact |
sirohaem biosynthesis | exact |
siroheme synthesis | exact |
Ancestor Chart
Ancestor chart for GO:0019354
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR006366 | Uroporphyrin-III C-methyltransferase |
InterPro | IPR006367 | Sirohaem synthase, N-terminal |
InterPro | IPR012066 | Uroporphyrin-III C-methyltransferase, fungi |
InterPro | IPR012409 | Sirohaem synthase |
InterPro | IPR028161 | Siroheme biosynthesis protein Met8-like |
MetaCyc | PWY-5194 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_output | CHEBI | CHEBI:60052 | siroheme(8-) |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0009006 | obsolete siroheme synthase activity | consider GO:0019354 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0019354 based on ALL annotations
The top 100 of 295 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
siroheme biosynthetic process
|
3,262.88 | 100.00 | 60,730 | 60,730 |
uroporphyrin-III C-methyltransferase activity
|
3,155.99 | 73.80 | 45,970 | 47,527 |
precorrin-2 dehydrogenase activity
|
3,260.12 | 44.65 | 27,125 | 27,148 |
sirohydrochlorin ferrochelatase activity
|
3,188.42 | 20.77 | 12,675 | 12,971 |
ferrochelatase activity
|
1,044.02 | 19.19 | 19,682 | 61,512 |
porphyrin-containing compound biosynthetic process
|
509.60 | 15.58 | 59,891 | 383,474 |
uroporphyrinogen-III synthase activity
|
624.79 | 9.51 | 9,646 | 50,375 |
cobalamin biosynthetic process
|
114.03 | 3.09 | 12,871 | 368,297 |
tetrapyrrole biosynthetic process
|
60.10 | 1.37 | 3,046 | 165,367 |
methylation
|
41.21 | 1.26 | 46,004 | 3,642,626 |
Totals | 403052 | 115373401 |
No co-occurrence statistics for GO:0019354 based on MANUAL annotations
The top 27 of 27 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
siroheme biosynthetic process
|
8,606.91 | 100.00 | 164 | 164 |
uroporphyrin-III C-methyltransferase activity
|
8,606.91 | 76.22 | 125 | 125 |
precorrin-2 dehydrogenase activity
|
8,606.91 | 22.56 | 37 | 37 |
sirohydrochlorin ferrochelatase activity
|
5,164.15 | 1.81 | 3 | 5 |
regulation of sulfate assimilation
|
8,606.91 | 0.61 | 1 | 1 |
regulation of nitrate assimilation
|
2,151.73 | 0.60 | 1 | 4 |
positive regulation of chlorophyll biosynthetic process
|
1,075.86 | 0.58 | 1 | 8 |
ferrochelatase activity
|
40.22 | 0.27 | 1 | 214 |
anaerobic respiration
|
32.36 | 0.23 | 1 | 266 |
sulfate assimilation
|
23.04 | 0.22 | 2 | 747 |
Totals | 363 | 718971 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-01-26 | Deleted | XREF | AraCyc:PWYQT-62 |
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. |
2008-04-01 | Updated | RELATION | is a GO:0046156 (siroheme metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0006783 (heme biosynthetic process) |
2007-08-09 | Deleted | SYNONYM | siroheme synthesis |
2007-08-09 | Added | SYNONYM | siroheme synthesis |
2007-08-09 | Added | SYNONYM | siroheme synthase activity |
2007-08-09 | Added | SYNONYM | siroheme formation |
2007-08-09 | Added | SYNONYM | siroheme biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-01-15 | Updated | TERM | siroheme biosynthetic process |
2001-10-04 | Added | TERM | siroheme biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. |
2007-08-09 | Deleted | SYNONYM | siroheme synthesis |
2007-08-09 | Added | SYNONYM | siroheme synthesis |
2007-08-09 | Added | SYNONYM | siroheme synthase activity |
2007-08-09 | Added | SYNONYM | siroheme formation |
2007-08-09 | Added | SYNONYM | siroheme biosynthesis |
2007-08-09 | Added | SYNONYM | siroheme anabolism |
2007-08-09 | Added | SYNONYM | sirohaem biosynthetic process |
2007-08-09 | Added | SYNONYM | sirohaem biosynthesis |
2007-08-09 | Deleted | SYNONYM | siroheme synthase activity |
2007-08-09 | Deleted | SYNONYM | siroheme formation |
2007-08-09 | Deleted | SYNONYM | siroheme anabolism |
2007-08-09 | Deleted | SYNONYM | sirohaem biosynthesis |
2007-08-09 | Deleted | SYNONYM | siroheme biosynthesis |
2007-08-09 | Deleted | SYNONYM | sirohaem biosynthetic process |
2007-01-15 | Added | SYNONYM | sirohaem biosynthetic process |
2007-01-15 | Added | SYNONYM | siroheme biosynthesis |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. |
2005-08-10 | Added | SYNONYM | siroheme formation |
2005-08-10 | Added | SYNONYM | siroheme anabolism |
2005-08-10 | Added | SYNONYM | siroheme synthesis |
2005-08-10 | Added | SYNONYM | siroheme synthase activity |
2004-04-19 | Added | SYNONYM | sirohaem biosynthesis |
2004-04-16 | Deleted | SYNONYM | sirohaem biosynthesis |
2003-11-13 | Added | SYNONYM | sirohaem biosynthesis |
2002-11-27 | Added | DEFINITION | The formation from simpler components of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0046156 (siroheme metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0006783 (heme biosynthetic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-01-26 | Deleted | XREF | AraCyc:PWYQT-62 |
2007-07-19 | Added | XREF | MetaCyc:PWY-5194 |
2007-07-19 | Deleted | XREF | MetaCyc:HEMESYN2-PWY |
2007-06-27 | Added | XREF | AraCyc:PWYQT-62 |
2003-10-27 | Added | XREF | MetaCyc:HEMESYN2-PWY |
Timestamp | Action | Category | Detail |
---|
Please Wait...
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link