This term is obsolete.

GO:0019354 JSON

siroheme biosynthetic process

Biological Process

Definition (GO:0019354 GONUTS page)

The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.

60,888 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
siroheme formation exact
siroheme synthase activity related
siroheme anabolism exact
sirohaem biosynthetic process exact
siroheme biosynthesis exact
sirohaem biosynthesis exact
siroheme synthesis exact

Ancestor Chart

Ancestor chart for GO:0019354
Chart options
Ancestor chart

Cross-references

Database ID Description
InterPro IPR006366 Uroporphyrin-III C-methyltransferase
InterPro IPR006367 Sirohaem synthase, N-terminal
InterPro IPR012066 Uroporphyrin-III C-methyltransferase, fungi
InterPro IPR012409 Sirohaem synthase
InterPro IPR028161 Siroheme biosynthesis protein Met8-like
MetaCyc PWY-5194

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_output CHEBI CHEBI:60052 siroheme(8-)

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0009006 obsolete siroheme synthase activity consider GO:0019354

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0019354 based on ALL annotations
The top 100 of 295 co-occurring terms
Co-occurring Term PR S% #Together #Compared
siroheme biosynthetic process
3,262.88 100.00 60,730 60,730
uroporphyrin-III C-methyltransferase activity
3,155.99 73.80 45,970 47,527
precorrin-2 dehydrogenase activity
3,260.12 44.65 27,125 27,148
sirohydrochlorin ferrochelatase activity
3,188.42 20.77 12,675 12,971
ferrochelatase activity
1,044.02 19.19 19,682 61,512
porphyrin-containing compound biosynthetic process
509.60 15.58 59,891 383,474
uroporphyrinogen-III synthase activity
624.79 9.51 9,646 50,375
cobalamin biosynthetic process
114.03 3.09 12,871 368,297
tetrapyrrole biosynthetic process
60.10 1.37 3,046 165,367
methylation
41.21 1.26 46,004 3,642,626
Totals 403052 115373401
No co-occurrence statistics for GO:0019354 based on MANUAL annotations
The top 27 of 27 co-occurring terms
Co-occurring Term PR S% #Together #Compared
siroheme biosynthetic process
8,606.91 100.00 164 164
uroporphyrin-III C-methyltransferase activity
8,606.91 76.22 125 125
precorrin-2 dehydrogenase activity
8,606.91 22.56 37 37
sirohydrochlorin ferrochelatase activity
5,164.15 1.81 3 5
regulation of sulfate assimilation
8,606.91 0.61 1 1
regulation of nitrate assimilation
2,151.73 0.60 1 4
positive regulation of chlorophyll biosynthetic process
1,075.86 0.58 1 8
ferrochelatase activity
40.22 0.27 1 214
anaerobic respiration
32.36 0.23 1 266
sulfate assimilation
23.04 0.22 2 747
Totals 363 718971

Change Log

Timestamp Action Category Detail
2020-01-26 Deleted XREF AraCyc:PWYQT-62
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
2008-04-01 Updated RELATION is a GO:0046156 (siroheme metabolic process)
2008-04-01 Updated RELATION is a GO:0006783 (heme biosynthetic process)
2007-08-09 Deleted SYNONYM siroheme synthesis
2007-08-09 Added SYNONYM siroheme synthesis
2007-08-09 Added SYNONYM siroheme synthase activity
2007-08-09 Added SYNONYM siroheme formation
2007-08-09 Added SYNONYM siroheme biosynthesis
Timestamp Action Category Detail
2007-01-15 Updated TERM siroheme biosynthetic process
2001-10-04 Added TERM siroheme biosynthesis
Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
2007-08-09 Deleted SYNONYM siroheme synthesis
2007-08-09 Added SYNONYM siroheme synthesis
2007-08-09 Added SYNONYM siroheme synthase activity
2007-08-09 Added SYNONYM siroheme formation
2007-08-09 Added SYNONYM siroheme biosynthesis
2007-08-09 Added SYNONYM siroheme anabolism
2007-08-09 Added SYNONYM sirohaem biosynthetic process
2007-08-09 Added SYNONYM sirohaem biosynthesis
2007-08-09 Deleted SYNONYM siroheme synthase activity
2007-08-09 Deleted SYNONYM siroheme formation
2007-08-09 Deleted SYNONYM siroheme anabolism
2007-08-09 Deleted SYNONYM sirohaem biosynthesis
2007-08-09 Deleted SYNONYM siroheme biosynthesis
2007-08-09 Deleted SYNONYM sirohaem biosynthetic process
2007-01-15 Added SYNONYM sirohaem biosynthetic process
2007-01-15 Added SYNONYM siroheme biosynthesis
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the formation of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
2005-08-10 Added SYNONYM siroheme formation
2005-08-10 Added SYNONYM siroheme anabolism
2005-08-10 Added SYNONYM siroheme synthesis
2005-08-10 Added SYNONYM siroheme synthase activity
2004-04-19 Added SYNONYM sirohaem biosynthesis
2004-04-16 Deleted SYNONYM sirohaem biosynthesis
2003-11-13 Added SYNONYM sirohaem biosynthesis
2002-11-27 Added DEFINITION The formation from simpler components of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0046156 (siroheme metabolic process)
2008-04-01 Updated RELATION is a GO:0006783 (heme biosynthetic process)
Timestamp Action Category Detail
2020-01-26 Deleted XREF AraCyc:PWYQT-62
2007-07-19 Added XREF MetaCyc:PWY-5194
2007-07-19 Deleted XREF MetaCyc:HEMESYN2-PWY
2007-06-27 Added XREF AraCyc:PWYQT-62
2003-10-27 Added XREF MetaCyc:HEMESYN2-PWY
Timestamp Action Category Detail
Please Wait...

Not found :(

Sorry, but the Term you were trying to view does not exist.

Reported error:

It looks like this may have been caused by:

  • a mistyped URL
  • an out-of-date link
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice and Terms of Use.