GO:0043622
JSON
cortical microtubule organization
Biological Process
Definition (GO:0043622 GONUTS page)
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
| Synonym | Type |
|---|---|
| cortical microtubule cytoskeleton organization | exact |
| cortical microtubule organisation | exact |
| cortical microtubule organization and biogenesis | related |
Ancestor Chart
Ancestor chart for GO:0043622
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
| Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
|---|---|---|---|---|---|---|---|
| NOT-qualified manual | protein | A0A0G2JTD8 | 10116 | A0A0G2JTD8_RAT | GO:0000226 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | A0A8I6A623 | 10116 | A0A8I6A623_RAT | GO:0000226 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | A6J8N3 | 10116 | A6J8N3_RAT | GO:0000226 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | D4A6T9 | 10116 | D4A6T9_RAT | GO:0000226 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | O13310 | 284812 | ORB6_SCHPO | GO:0000226 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19646873 | |
| NOT-qualified manual | protein | P31232 | 10116 | TAGL_RAT | GO:0007010 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | P37804 | 10090 | TAGL_MOUSE | GO:0007010 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:11158319 | |
| NOT-qualified manual | protein | Q383E4 | 185431 | Q383E4_TRYB2 | GO:0043622 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:26224545 | |
| NOT-qualified manual | protein | Q389Z9 | 185431 | Q389Z9_TRYB2 | GO:0043622 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:26224545 | |
| NOT-qualified manual | protein | Q4Q0X5 | 5664 | Q4Q0X5_LEIMA | GO:0043622 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000024 |
Cross-references
| Database | ID | Description |
|---|---|---|
| InterPro | IPR035010 | Dual specificity protein phosphatase PHS1 |
| InterPro | IPR039613 | Protein SPIRAL1-like |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0043622 based on ALL annotations
The top 100 of 825 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
cortical microtubule organization
|
27,540.64 | 100.00 | 7,195 | 7,195 |
|
cortical microtubule
|
10,102.50 | 24.61 | 3,078 | 8,391 |
|
cortical microtubule, transverse to long axis
|
18,363.99 | 21.30 | 1,715 | 2,572 |
|
response to abscisic acid
|
2,094.78 | 5.29 | 1,066 | 14,015 |
|
astral microtubule organization
|
5,910.69 | 2.35 | 185 | 862 |
|
negative regulation of p38MAPK cascade
|
2,824.29 | 2.10 | 185 | 1,804 |
|
protein-containing complex localization
|
2,370.88 | 2.02 | 185 | 2,149 |
|
anisotropic cell growth
|
2,122.01 | 1.58 | 140 | 1,817 |
|
immunological synapse
|
965.15 | 1.51 | 185 | 5,279 |
|
negative regulation of lamellipodium morphogenesis
|
16,733.55 | 1.32 | 96 | 158 |
| Totals | 22384 | 230681 | ||
No co-occurrence statistics for GO:0043622 based on MANUAL annotations
The top 100 of 626 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
cortical microtubule organization
|
2,400.57 | 100.00 | 588 | 588 |
|
cortical microtubule, transverse to long axis
|
1,785.79 | 28.11 | 183 | 246 |
|
cortical microtubule
|
871.48 | 25.59 | 273 | 752 |
|
regulation of actin polymerization or depolymerization
|
562.42 | 5.68 | 41 | 175 |
|
regulation of Rho protein signal transduction
|
175.56 | 3.93 | 46 | 629 |
|
ankyrin repeat binding
|
713.68 | 1.79 | 11 | 37 |
|
regulation of axon guidance
|
550.13 | 1.76 | 11 | 48 |
|
regulation of microtubule polymerization
|
480.11 | 1.74 | 11 | 55 |
|
regulation of microtubule depolymerization
|
300.07 | 1.65 | 11 | 88 |
|
axonal growth cone
|
93.83 | 1.36 | 12 | 307 |
| Totals | 1789 | 65058 | ||
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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- Cross-references
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| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2009-06-16 | Deleted | SYNONYM | cortical microtubule cytoskeleton organization and biogenesis |
| 2009-06-16 | Added | SYNONYM | cortical microtubule organization and biogenesis |
| 2009-06-16 | Added | SYNONYM | cortical microtubule cytoskeleton organization |
| 2009-06-16 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2009-06-16 | Added | SYNONYM | cortical microtubule organisation |
| 2009-06-16 | Added | DEFINITION | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2009-06-16 | Deleted | SYNONYM | cortical microtubule organization and biogenesis |
| 2009-06-16 | Deleted | SYNONYM | cortical microtubule organisation and biogenesis |
| 2008-10-02 | Added | SYNONYM | cortical microtubule organization and biogenesis |
| 2008-10-02 | Updated | TERM | cortical microtubule organization |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2008-10-02 | Updated | TERM | cortical microtubule organization |
| 2006-02-09 | Added | TERM | cortical microtubule organization and biogenesis |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2009-06-16 | Deleted | SYNONYM | cortical microtubule cytoskeleton organization and biogenesis |
| 2009-06-16 | Added | SYNONYM | cortical microtubule organization and biogenesis |
| 2009-06-16 | Added | SYNONYM | cortical microtubule cytoskeleton organization |
| 2009-06-16 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2009-06-16 | Added | SYNONYM | cortical microtubule organisation |
| 2009-06-16 | Added | DEFINITION | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2009-06-16 | Deleted | SYNONYM | cortical microtubule organization and biogenesis |
| 2009-06-16 | Deleted | SYNONYM | cortical microtubule organisation and biogenesis |
| 2008-10-02 | Added | SYNONYM | cortical microtubule organization and biogenesis |
| 2008-05-13 | Added | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2008-05-12 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2007-08-09 | Added | SYNONYM | cortical microtubule cytoskeleton organization and biogenesis |
| 2007-08-09 | Deleted | SYNONYM | cortical microtubule organisation and biogenesis |
| 2007-08-09 | Deleted | SYNONYM | cortical microtubule cytoskeleton organization and biogenesis |
| 2007-08-09 | Added | SYNONYM | cortical microtubule organisation and biogenesis |
| 2007-04-27 | Updated | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2006-02-10 | Added | DEFINITION | The assembly and arrangement of structures formed of microtubules and associated proteins in the cell cortex, i.e. just beneath the plasma membrane of a cell. |
| 2006-02-09 | Added | SYNONYM | cortical microtubule organisation and biogenesis |
| 2006-02-09 | Added | SYNONYM | cortical microtubule cytoskeleton organization and biogenesis |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2008-04-01 | Updated | RELATION | is a GO:0030865 (cortical cytoskeleton organization) |
| 2008-04-01 | Updated | RELATION | is a GO:0031122 (cytoplasmic microtubule organization) |
| Timestamp | Action | Category | Detail |
|---|
| Timestamp | Action | Category | Detail |
|---|
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