GO:0045893
JSON
positive regulation of DNA-templated transcription
Biological Process
Definition (GO:0045893 GONUTS page)
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
Secondary IDs
GO:0043193, GO:0045941, GO:0061020
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
up-regulation of gene-specific transcription | related |
positive regulation of transcription, DNA-dependent | exact |
transcription activator activity | related |
up regulation of gene-specific transcription | related |
positive regulation of cellular transcription, DNA-dependent | exact |
positive regulation of transcription, DNA-templated | exact |
up regulation of transcription, DNA-dependent | exact |
upregulation of gene-specific transcription | related |
positive regulation of gene-specific transcription | related |
upregulation of transcription, DNA-dependent | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0045893
Child Term | Relationship to GO:0045893 |
---|---|
transcription coactivator activity
|
part_of |
RNA-binding transcription regulator activity
|
part_of |
positive regulation of transcription by transcription factor localization
|
is_a |
positive regulation of transcription by RNA polymerase I
|
is_a |
positive regulation of DNA-templated transcription, elongation
|
is_a |
positive regulation of termination of DNA-templated transcription
|
is_a |
positive regulation of piRNA transcription
|
is_a |
positive regulation of transcription by RNA polymerase II
|
is_a |
positive regulation of transcription by RNA polymerase III
|
is_a |
positive regulation of mitochondrial transcription
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to transcription processes | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5ZJD4 | 10116 | A0A8I5ZJD4_RAT | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A9CSE6 | 8410 | A9CSE6_GLARU | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000247 from this reference: PMID:16219985 | |
NOT-qualified manual | protein | A9CSE8 | 8410 | A9CSE8_GLARU | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000247 from this reference: PMID:16219985 | |
NOT-qualified manual | protein | F1M349 | 10116 | F1M349_RAT | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | G0X3E3 | 3635 | G0X3E3_GOSHI | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:21733855 | |
NOT-qualified manual | protein | O42223 | 34903 | O42223_TRASC | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000247 from this reference: PMID:16219985 | |
NOT-qualified manual | protein | O64722 | 3702 | ZHD3_ARATH | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17233795 | |
NOT-qualified manual | protein | P19544-1 | 9606 | WT1_HUMAN | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9815658 | |
NOT-qualified manual | protein | P19544-3 | 9606 | WT1_HUMAN | GO:0045893 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9815658 | |
NOT-qualified manual | protein | P26801 | 10116 | CEBPG_RAT | GO:0006355 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR001550 | Transcription antiterminator, conserved site |
InterPro | IPR004120 | HTLV Tax |
InterPro | IPR004186 | Epstein Barr virus nuclear antigen-1, DNA-binding |
InterPro | IPR004956 | Foamy virus BEL 1/2 protein |
InterPro | IPR005205 | Herpesvirus ICP4-like protein, C-terminal |
InterPro | IPR005206 | Herpesvirus ICP4-like protein, N-terminal |
InterPro | IPR006897 | Hepatocyte nuclear factor 1, beta isoform, C-terminal |
InterPro | IPR006898 | Hepatocyte nuclear factor 1, alpha isoform C-terminal |
InterPro | IPR006899 | Hepatocyte nuclear factor 1, N-terminal |
InterPro | IPR007532 | Poxvirus early transcription factor, large subunit |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0071733 | obsolete transcriptional activation by promoter-enhancer looping | consider GO:0045893 |
GO:0090203 | obsolete transcriptional activation by promoter-terminator looping | consider GO:0045893 |
GO:0007072 | obsolete positive regulation of transcription involved in exit from mitosis | replaced_by GO:0045893 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0045893 based on ALL annotations
The top 100 of 8,618 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
positive regulation of DNA-templated transcription
|
423.73 | 100.00 | 467,639 | 467,639 |
transcription coactivator activity
|
223.52 | 16.83 | 92,658 | 175,653 |
anti-sigma factor antagonist activity
|
423.73 | 13.48 | 63,035 | 63,035 |
DNA-binding transcription activator activity
|
419.29 | 7.01 | 32,797 | 33,145 |
SAGA complex
|
192.95 | 5.15 | 25,661 | 56,355 |
RNA polymerase II cis-regulatory region sequence-specific DNA binding
|
27.44 | 4.75 | 70,786 | 1,093,198 |
regulation of transcription by RNA polymerase II
|
22.48 | 4.62 | 122,779 | 2,314,777 |
DNA-binding transcription factor activity, RNA polymerase II-specific
|
23.37 | 4.39 | 83,177 | 1,508,451 |
nucleoplasm
|
30.75 | 4.30 | 44,601 | 614,589 |
cell fate specification
|
283.79 | 4.28 | 20,440 | 30,520 |
Totals | 2820654 | 68521109 |
No co-occurrence statistics for GO:0045893 based on MANUAL annotations
The top 100 of 7,204 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
positive regulation of DNA-templated transcription
|
160.11 | 100.00 | 8,816 | 8,816 |
sequence-specific DNA binding
|
25.14 | 9.60 | 1,746 | 11,122 |
transcription cis-regulatory region binding
|
24.22 | 9.40 | 1,752 | 11,582 |
DNA-binding transcription factor activity
|
17.04 | 8.09 | 2,227 | 20,929 |
DNA binding
|
19.25 | 7.70 | 1,554 | 12,927 |
positive regulation of transcription by RNA polymerase II
|
17.52 | 7.45 | 1,672 | 15,284 |
negative regulation of DNA-templated transcription
|
25.24 | 6.79 | 940 | 5,962 |
DNA-binding transcription activator activity, RNA polymerase II-specific
|
30.61 | 6.04 | 715 | 3,740 |
transcription coactivator activity
|
21.95 | 5.44 | 729 | 5,317 |
negative regulation of transcription by RNA polymerase II
|
14.01 | 4.68 | 805 | 9,201 |
Totals | 52194 | 703126 |
Change Log
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- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2023-07-02 | Deleted | RELATION | is a GO:0010628 (positive regulation of gene expression) |
2023-06-18 | Added | RELATION | is a GO:0010628 (positive regulation of gene expression) |
2023-06-13 | Deleted | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2023-06-13 | Added | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2023-05-20 | Added | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2023-05-20 | Deleted | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2023-04-24 | Deleted | RELATION | is a GO:1903508 (obsolete positive regulation of nucleic acid-templated transcription) |
2023-04-24 | Added | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2022-06-12 | Updated | TERM | positive regulation of DNA-templated transcription |
2022-06-12 | Added | SYNONYM | positive regulation of transcription, DNA-templated |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-12 | Updated | TERM | positive regulation of DNA-templated transcription |
2013-12-14 | Updated | TERM | positive regulation of transcription, DNA-templated |
2010-02-27 | Updated | TERM | positive regulation of transcription, DNA-dependent |
2010-02-10 | Updated | TERM | positive regulation of cellular transcription, DNA-dependent |
2002-08-20 | Added | TERM | positive regulation of transcription, DNA-dependent |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-12 | Added | SYNONYM | positive regulation of transcription, DNA-templated |
2013-12-14 | Added | DEFINITION | Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
2013-12-14 | Added | SYNONYM | positive regulation of transcription, DNA-dependent |
2013-12-14 | Deleted | DEFINITION | Any process that activates or increases the frequency, rate or extent of cellular DNA-dependent transcription. |
2011-11-17 | Added | SYNONYM | transcription activator activity |
2011-05-15 | Added | SYNONYM | up-regulation of gene-specific transcription |
2011-05-15 | Added | SYNONYM | activation of gene-specific transcription |
2011-05-15 | Added | SYNONYM | up regulation of gene-specific transcription |
2011-05-15 | Added | SYNONYM | upregulation of gene-specific transcription |
2011-05-15 | Added | SYNONYM | positive regulation of gene-specific transcription |
2011-05-15 | Added | SYNONYM | stimulation of gene-specific transcription |
2010-02-27 | Added | SYNONYM | positive regulation of cellular transcription, DNA-dependent |
2010-02-10 | Added | DEFINITION | Any process that activates or increases the frequency, rate or extent of cellular DNA-dependent transcription. |
2010-02-10 | Deleted | DEFINITION | Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription. |
2008-05-13 | Added | DEFINITION | Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription. |
2008-05-12 | Deleted | DEFINITION | Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription. |
2007-08-09 | Deleted | SYNONYM | up-regulation of transcription, DNA-dependent |
2007-08-09 | Deleted | SYNONYM | upregulation of transcription, DNA-dependent |
2007-08-09 | Deleted | SYNONYM | up regulation of transcription, DNA-dependent |
2007-08-09 | Deleted | SYNONYM | stimulation of transcription, DNA-dependent |
2007-08-09 | Deleted | SYNONYM | activation of transcription, DNA-dependent |
2007-08-09 | Added | SYNONYM | activation of transcription, DNA-dependent |
2007-08-09 | Added | SYNONYM | up regulation of transcription, DNA-dependent |
2007-08-09 | Added | SYNONYM | upregulation of transcription, DNA-dependent |
2007-08-09 | Added | SYNONYM | stimulation of transcription, DNA-dependent |
2007-08-09 | Added | SYNONYM | up-regulation of transcription, DNA-dependent |
2007-02-23 | Added | SYNONYM | up regulation of transcription, DNA-dependent |
2007-02-23 | Added | SYNONYM | up-regulation of transcription, DNA-dependent |
2007-02-23 | Added | SYNONYM | upregulation of transcription, DNA-dependent |
2007-02-23 | Added | SYNONYM | stimulation of transcription, DNA-dependent |
2007-02-23 | Added | SYNONYM | activation of transcription, DNA-dependent |
2006-05-04 | Updated | DEFINITION | Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription. |
2005-10-21 | Updated | DEFINITION | Any process that activates or increases the rate, frequency or extent of DNA-dependent transcription. |
2002-11-27 | Added | DEFINITION | Any process that activates or increases the rate of DNA-dependent transcription. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2023-07-02 | Deleted | RELATION | is a GO:0010628 (positive regulation of gene expression) |
2023-06-18 | Added | RELATION | is a GO:0010628 (positive regulation of gene expression) |
2023-06-13 | Deleted | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2023-06-13 | Added | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2023-05-20 | Added | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2023-05-20 | Deleted | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2023-04-24 | Deleted | RELATION | is a GO:1903508 (obsolete positive regulation of nucleic acid-templated transcription) |
2023-04-24 | Added | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2021-01-30 | Deleted | RELATION | is a GO:0010628 (positive regulation of gene expression) |
2014-10-05 | Added | RELATION | is a GO:1903508 (obsolete positive regulation of nucleic acid-templated transcription) |
2014-10-05 | Deleted | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2014-10-05 | Deleted | RELATION | is a GO:0051254 (positive regulation of RNA metabolic process) |
2014-10-05 | Deleted | RELATION | is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process) |
2014-10-05 | Deleted | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2014-06-05 | Added | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2014-06-05 | Added | RELATION | is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process) |
2014-06-05 | Added | RELATION | is a GO:0051254 (positive regulation of RNA metabolic process) |
2014-02-17 | Deleted | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2014-02-17 | Deleted | RELATION | is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process) |
2014-02-17 | Added | RELATION | is a GO:1902680 (positive regulation of RNA biosynthetic process) |
2014-02-17 | Deleted | RELATION | is a GO:0051254 (positive regulation of RNA metabolic process) |
2011-03-18 | Added | RELATION | is a GO:0010628 (positive regulation of gene expression) |
2011-03-18 | Added | RELATION | is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process) |
2011-03-18 | Added | RELATION | is a GO:0010557 (positive regulation of macromolecule biosynthetic process) |
2011-03-18 | Deleted | RELATION | is a GO:0045941 (positive regulation of transcription) |
2008-04-01 | Added | RELATION | positively regulates GO:0006351 (DNA-templated transcription) |
2008-04-01 | Updated | RELATION | is a GO:0006355 (regulation of DNA-templated transcription) |
2008-04-01 | Updated | RELATION | is a GO:0045941 (positive regulation of transcription) |
2008-04-01 | Updated | RELATION | is a GO:0051254 (positive regulation of RNA metabolic process) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-05-15 | Added | SECONDARY | GO:0043193 (positive regulation of gene-specific transcription) |
2011-03-18 | Added | SECONDARY | GO:0061020 (positive regulation of transcription) |
2011-03-18 | Added | SECONDARY | GO:0045941 (positive regulation of transcription) |
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