This term is obsolete.

GO:0045893 JSON

positive regulation of DNA-templated transcription

Biological Process

Definition (GO:0045893 GONUTS page)

Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.

Secondary IDs

GO:0043193, GO:0045941, GO:0061020

1,688,492 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
up-regulation of gene-specific transcription related
positive regulation of transcription, DNA-dependent exact
transcription activator activity related
up regulation of gene-specific transcription related
positive regulation of cellular transcription, DNA-dependent exact
positive regulation of transcription, DNA-templated exact
up regulation of transcription, DNA-dependent exact
upregulation of gene-specific transcription related
positive regulation of gene-specific transcription related
upregulation of transcription, DNA-dependent exact

Ancestor Chart

Ancestor chart for GO:0045893
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0045893

Child Term Relationship to
GO:0045893
transcription coactivator activity
part_of
RNA-binding transcription regulator activity
part_of
positive regulation of transcription by transcription factor localization
is_a
positive regulation of transcription by RNA polymerase I
is_a
positive regulation of DNA-templated transcription, elongation
is_a
positive regulation of termination of DNA-templated transcription
is_a
positive regulation of piRNA transcription
is_a
positive regulation of transcription by RNA polymerase II
is_a
positive regulation of transcription by RNA polymerase III
is_a
positive regulation of mitochondrial transcription
is_a

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating to transcription processes Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I5ZJD4 10116 A0A8I5ZJD4_RAT GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A9CSE6 8410 A9CSE6_GLARU GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000247 from this reference: PMID:16219985
NOT-qualified manual protein A9CSE8 8410 A9CSE8_GLARU GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000247 from this reference: PMID:16219985
NOT-qualified manual protein F1M349 10116 F1M349_RAT GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein G0X3E3 3635 G0X3E3_GOSHI GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:21733855
NOT-qualified manual protein O42223 34903 O42223_TRASC GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000247 from this reference: PMID:16219985
NOT-qualified manual protein O64722 3702 ZHD3_ARATH GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17233795
NOT-qualified manual protein P19544-1 9606 WT1_HUMAN GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9815658
NOT-qualified manual protein P19544-3 9606 WT1_HUMAN GO:0045893 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9815658
NOT-qualified manual protein P26801 10116 CEBPG_RAT GO:0006355 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Cross-references

Database ID Description
InterPro IPR001550 Transcription antiterminator, conserved site
InterPro IPR004120 HTLV Tax
InterPro IPR004186 Epstein Barr virus nuclear antigen-1, DNA-binding
InterPro IPR004956 Foamy virus BEL 1/2 protein
InterPro IPR005205 Herpesvirus ICP4-like protein, C-terminal
InterPro IPR005206 Herpesvirus ICP4-like protein, N-terminal
InterPro IPR006897 Hepatocyte nuclear factor 1, beta isoform, C-terminal
InterPro IPR006898 Hepatocyte nuclear factor 1, alpha isoform C-terminal
InterPro IPR006899 Hepatocyte nuclear factor 1, N-terminal
InterPro IPR007532 Poxvirus early transcription factor, large subunit

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0071733 obsolete transcriptional activation by promoter-enhancer looping consider GO:0045893
GO:0090203 obsolete transcriptional activation by promoter-terminator looping consider GO:0045893
GO:0007072 obsolete positive regulation of transcription involved in exit from mitosis replaced_by GO:0045893

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0045893 based on ALL annotations
The top 100 of 8,618 co-occurring terms
Co-occurring Term PR S% #Together #Compared
positive regulation of DNA-templated transcription
423.73 100.00 467,639 467,639
transcription coactivator activity
223.52 16.83 92,658 175,653
anti-sigma factor antagonist activity
423.73 13.48 63,035 63,035
DNA-binding transcription activator activity
419.29 7.01 32,797 33,145
SAGA complex
192.95 5.15 25,661 56,355
RNA polymerase II cis-regulatory region sequence-specific DNA binding
27.44 4.75 70,786 1,093,198
regulation of transcription by RNA polymerase II
22.48 4.62 122,779 2,314,777
DNA-binding transcription factor activity, RNA polymerase II-specific
23.37 4.39 83,177 1,508,451
nucleoplasm
30.75 4.30 44,601 614,589
cell fate specification
283.79 4.28 20,440 30,520
Totals 2820654 68521109
No co-occurrence statistics for GO:0045893 based on MANUAL annotations
The top 100 of 7,204 co-occurring terms
Co-occurring Term PR S% #Together #Compared
positive regulation of DNA-templated transcription
160.11 100.00 8,816 8,816
sequence-specific DNA binding
25.14 9.60 1,746 11,122
transcription cis-regulatory region binding
24.22 9.40 1,752 11,582
DNA-binding transcription factor activity
17.04 8.09 2,227 20,929
DNA binding
19.25 7.70 1,554 12,927
positive regulation of transcription by RNA polymerase II
17.52 7.45 1,672 15,284
negative regulation of DNA-templated transcription
25.24 6.79 940 5,962
DNA-binding transcription activator activity, RNA polymerase II-specific
30.61 6.04 715 3,740
transcription coactivator activity
21.95 5.44 729 5,317
negative regulation of transcription by RNA polymerase II
14.01 4.68 805 9,201
Totals 52194 703126

Change Log

Timestamp Action Category Detail
2023-07-02 Deleted RELATION is a GO:0010628 (positive regulation of gene expression)
2023-06-18 Added RELATION is a GO:0010628 (positive regulation of gene expression)
2023-06-13 Deleted RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2023-06-13 Added RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2023-05-20 Added RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2023-05-20 Deleted RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2023-04-24 Deleted RELATION is a GO:1903508 (obsolete positive regulation of nucleic acid-templated transcription)
2023-04-24 Added RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2022-06-12 Updated TERM positive regulation of DNA-templated transcription
2022-06-12 Added SYNONYM positive regulation of transcription, DNA-templated
Timestamp Action Category Detail
2022-06-12 Updated TERM positive regulation of DNA-templated transcription
2013-12-14 Updated TERM positive regulation of transcription, DNA-templated
2010-02-27 Updated TERM positive regulation of transcription, DNA-dependent
2010-02-10 Updated TERM positive regulation of cellular transcription, DNA-dependent
2002-08-20 Added TERM positive regulation of transcription, DNA-dependent
Timestamp Action Category Detail
2022-06-12 Added SYNONYM positive regulation of transcription, DNA-templated
2013-12-14 Added DEFINITION Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
2013-12-14 Added SYNONYM positive regulation of transcription, DNA-dependent
2013-12-14 Deleted DEFINITION Any process that activates or increases the frequency, rate or extent of cellular DNA-dependent transcription.
2011-11-17 Added SYNONYM transcription activator activity
2011-05-15 Added SYNONYM up-regulation of gene-specific transcription
2011-05-15 Added SYNONYM activation of gene-specific transcription
2011-05-15 Added SYNONYM up regulation of gene-specific transcription
2011-05-15 Added SYNONYM upregulation of gene-specific transcription
2011-05-15 Added SYNONYM positive regulation of gene-specific transcription
2011-05-15 Added SYNONYM stimulation of gene-specific transcription
2010-02-27 Added SYNONYM positive regulation of cellular transcription, DNA-dependent
2010-02-10 Added DEFINITION Any process that activates or increases the frequency, rate or extent of cellular DNA-dependent transcription.
2010-02-10 Deleted DEFINITION Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription.
2008-05-13 Added DEFINITION Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription.
2008-05-12 Deleted DEFINITION Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription.
2007-08-09 Deleted SYNONYM up-regulation of transcription, DNA-dependent
2007-08-09 Deleted SYNONYM upregulation of transcription, DNA-dependent
2007-08-09 Deleted SYNONYM up regulation of transcription, DNA-dependent
2007-08-09 Deleted SYNONYM stimulation of transcription, DNA-dependent
2007-08-09 Deleted SYNONYM activation of transcription, DNA-dependent
2007-08-09 Added SYNONYM activation of transcription, DNA-dependent
2007-08-09 Added SYNONYM up regulation of transcription, DNA-dependent
2007-08-09 Added SYNONYM upregulation of transcription, DNA-dependent
2007-08-09 Added SYNONYM stimulation of transcription, DNA-dependent
2007-08-09 Added SYNONYM up-regulation of transcription, DNA-dependent
2007-02-23 Added SYNONYM up regulation of transcription, DNA-dependent
2007-02-23 Added SYNONYM up-regulation of transcription, DNA-dependent
2007-02-23 Added SYNONYM upregulation of transcription, DNA-dependent
2007-02-23 Added SYNONYM stimulation of transcription, DNA-dependent
2007-02-23 Added SYNONYM activation of transcription, DNA-dependent
2006-05-04 Updated DEFINITION Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription.
2005-10-21 Updated DEFINITION Any process that activates or increases the rate, frequency or extent of DNA-dependent transcription.
2002-11-27 Added DEFINITION Any process that activates or increases the rate of DNA-dependent transcription.
Timestamp Action Category Detail
2023-07-02 Deleted RELATION is a GO:0010628 (positive regulation of gene expression)
2023-06-18 Added RELATION is a GO:0010628 (positive regulation of gene expression)
2023-06-13 Deleted RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2023-06-13 Added RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2023-05-20 Added RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2023-05-20 Deleted RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2023-04-24 Deleted RELATION is a GO:1903508 (obsolete positive regulation of nucleic acid-templated transcription)
2023-04-24 Added RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2021-01-30 Deleted RELATION is a GO:0010628 (positive regulation of gene expression)
2014-10-05 Added RELATION is a GO:1903508 (obsolete positive regulation of nucleic acid-templated transcription)
2014-10-05 Deleted RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2014-10-05 Deleted RELATION is a GO:0051254 (positive regulation of RNA metabolic process)
2014-10-05 Deleted RELATION is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process)
2014-10-05 Deleted RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2014-06-05 Added RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2014-06-05 Added RELATION is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process)
2014-06-05 Added RELATION is a GO:0051254 (positive regulation of RNA metabolic process)
2014-02-17 Deleted RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2014-02-17 Deleted RELATION is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process)
2014-02-17 Added RELATION is a GO:1902680 (positive regulation of RNA biosynthetic process)
2014-02-17 Deleted RELATION is a GO:0051254 (positive regulation of RNA metabolic process)
2011-03-18 Added RELATION is a GO:0010628 (positive regulation of gene expression)
2011-03-18 Added RELATION is a GO:0031328 (obsolete positive regulation of cellular biosynthetic process)
2011-03-18 Added RELATION is a GO:0010557 (positive regulation of macromolecule biosynthetic process)
2011-03-18 Deleted RELATION is a GO:0045941 (positive regulation of transcription)
2008-04-01 Added RELATION positively regulates GO:0006351 (DNA-templated transcription)
2008-04-01 Updated RELATION is a GO:0006355 (regulation of DNA-templated transcription)
2008-04-01 Updated RELATION is a GO:0045941 (positive regulation of transcription)
2008-04-01 Updated RELATION is a GO:0051254 (positive regulation of RNA metabolic process)
Timestamp Action Category Detail
Timestamp Action Category Detail
2011-05-15 Added SECONDARY GO:0043193 (positive regulation of gene-specific transcription)
2011-03-18 Added SECONDARY GO:0061020 (positive regulation of transcription)
2011-03-18 Added SECONDARY GO:0045941 (positive regulation of transcription)
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