GO:0071256
JSON
translocon complex
Cellular Component
Definition (GO:0071256 GONUTS page)
A protein complex that constitutes a specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. The complex contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins. PMID:10611978 PMID:18166647 PMID:8612571
Secondary IDs
GO:0031206
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
| Synonym | Type |
|---|---|
| Sec complex-associated translocon complex | narrow |
Ancestor Chart
Ancestor chart for GO:0071256
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0071256
| Child Term | Relationship to GO:0071256 |
|---|---|
|
Ssh1 translocon complex
|
is_a |
|
Sec61 translocon complex
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
| Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
|---|---|---|---|---|---|
| GO:0071256 | translocon complex | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
| Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
|---|---|---|---|---|---|---|---|
| IEA Review | protein | O63264 | 4957 | ZBI1_ZYGBI | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
| IEA Review | protein | P03879 | 559292 | MBI4_YEAST | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
| IEA Review | protein | P03880 | 162425 | ANI1_EMEND | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
| IEA Review | protein | P03882 | 559292 | SCE1_YEAST | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
| IEA Review | protein | Q0H8X2 | 5270 | BI1_MYCMD | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
| IEA Review | protein | Q35127 | 367110 | MBI1_NEUCR | GO:0016020 | Proteins appear to be intron-encoded endonucleases that hit InterPro cytochrome b/b6 (IPR016175) and Di-haem cytochrome (IPR016174) entries. Communicated by InterPro 29-05-2012. | |
| NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
| NOT-qualified manual | protein | A0A0D1E8X3 | 5270 | A0A0D1E8X3_MYCMD | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
| NOT-qualified manual | protein | A0A0G2JZ79 | 10116 | SIR1_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0071256 based on ALL annotations
The top 48 of 48 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
translocon complex
|
442,425.40 | 100.00 | 450 | 450 |
|
misfolded protein transport
|
256,964.27 | 37.34 | 230 | 396 |
|
Ssh1 translocon complex
|
143,301.31 | 15.49 | 103 | 318 |
|
cytosol to endoplasmic reticulum transport
|
72,727.46 | 5.69 | 36 | 219 |
|
post-translational protein targeting to membrane, translocation
|
25,156.87 | 5.69 | 450 | 7,914 |
|
Sec61 translocon complex
|
25,540.39 | 5.67 | 341 | 5,907 |
|
signal sequence binding
|
18,411.05 | 4.00 | 230 | 5,527 |
|
SRP-dependent cotranslational protein targeting to membrane, translocation
|
14,350.52 | 3.21 | 341 | 10,513 |
|
establishment of protein localization
|
11,379.43 | 2.49 | 199 | 7,737 |
|
Sec62/Sec63 complex
|
6,725.85 | 1.45 | 109 | 7,170 |
| Totals | 6465 | 158671535 | ||
No co-occurrence statistics for GO:0071256 based on MANUAL annotations
The top 29 of 29 co-occurring terms
| Co-occurring Term | PR | S% | #Together | #Compared |
|---|---|---|---|---|
|
translocon complex
|
201,544.42 | 100.00 | 7 | 7 |
|
rough endoplasmic reticulum membrane
|
23,128.05 | 11.48 | 7 | 61 |
|
misfolded protein transport
|
67,181.48 | 11.11 | 1 | 3 |
|
cytosol to endoplasmic reticulum transport
|
33,590.74 | 8.33 | 1 | 6 |
|
protein-transporting ATPase activity
|
17,275.24 | 7.69 | 3 | 35 |
|
Sec62/Sec63 complex
|
5,269.14 | 2.56 | 4 | 153 |
|
Sec61 translocon complex
|
1,837.79 | 0.90 | 3 | 329 |
|
post-translational protein targeting to membrane, translocation
|
1,703.88 | 0.85 | 7 | 828 |
|
Ssh1 translocon complex
|
1,132.27 | 0.54 | 1 | 178 |
|
SRP-dependent cotranslational protein targeting to membrane
|
815.97 | 0.40 | 2 | 494 |
| Totals | 78 | 315666 | ||
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
| GO slim name | Total Number of Terms in Slim |
|---|---|
| goslim_pir | 437 |
Change Log
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| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
| 2020-11-03 | Added | RELATION | is a GO:0140534 (endoplasmic reticulum protein-containing complex) |
| 2019-09-12 | Deleted | RELATION | is a GO:0044432 (obsolete endoplasmic reticulum part) |
| 2018-07-13 | Added | SUBSET | goslim_pir |
| 2015-06-25 | Deleted | RELATION | is a GO:0043234 (protein complex) |
| 2015-06-25 | Deleted | RELATION | is a GO:0044425 (obsolete membrane part) |
| 2015-05-11 | Added | RELATION | is a GO:0098796 (membrane protein complex) |
| 2009-12-10 | Added | RELATION | is a GO:0044432 (obsolete endoplasmic reticulum part) |
| 2009-12-10 | Added | RELATION | is a GO:0044425 (obsolete membrane part) |
| 2009-12-10 | Added | RELATION | is a GO:0043234 (protein complex) |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2009-12-10 | Added | TERM | translocon complex |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2009-12-10 | Added | SYNONYM | Sec complex-associated translocon complex |
| 2009-12-10 | Added | DEFINITION | A protein complex that constitutes a specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. The complex contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins. |
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2020-11-03 | Added | RELATION | is a GO:0140534 (endoplasmic reticulum protein-containing complex) |
| 2019-09-12 | Deleted | RELATION | is a GO:0044432 (obsolete endoplasmic reticulum part) |
| 2015-06-25 | Deleted | RELATION | is a GO:0043234 (protein complex) |
| 2015-06-25 | Deleted | RELATION | is a GO:0044425 (obsolete membrane part) |
| 2015-05-11 | Added | RELATION | is a GO:0098796 (membrane protein complex) |
| 2009-12-10 | Added | RELATION | is a GO:0044432 (obsolete endoplasmic reticulum part) |
| 2009-12-10 | Added | RELATION | is a GO:0044425 (obsolete membrane part) |
| 2009-12-10 | Added | RELATION | is a GO:0043234 (protein complex) |
| 2009-12-10 | Added | RELATION | part of GO:0030867 (rough endoplasmic reticulum membrane) |
| Timestamp | Action | Category | Detail |
|---|
| Timestamp | Action | Category | Detail |
|---|---|---|---|
| 2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
| 2018-07-13 | Added | SUBSET | goslim_pir |
| 2009-12-10 | Added | SECONDARY | GO:0031206 (Sec complex-associated translocon complex) |
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