GO:0000027
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ribosomal large subunit assembly
Biological Process
Definition (GO:0000027 GONUTS page)
The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit. PMID:30467428
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
60S ribosomal subunit assembly | narrow |
50S ribosomal subunit assembly | narrow |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0000027
Child Term | Relationship to GO:0000027 |
---|---|
mitochondrial large ribosomal subunit assembly
|
is_a |
assembly of large subunit precursor of preribosome
|
part_of |
large ribosomal subunit pre-assembly complex
|
capable_of_part_of |
cytosolic large ribosomal subunit assembly
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0000027 | ribosomal large subunit assembly | Only in Taxon | 131567 | cellular organisms |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P08529 | 4577 | RK14_MAIZE | GO:0042255 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:2828044 | |
NOT-qualified manual | protein | Q6MG08 | 10116 | ABCF1_RAT | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q6P542 | 10090 | ABCF1_MOUSE | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q767L0 | 9823 | ABCF1_PIG | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q7YR37 | 9598 | ABCF1_PANTR | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q8NE71-2 | 9606 | ABCF1_HUMAN | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR012099 | Midasin |
InterPro | IPR028618 | ATP-dependent RNA helicase DeaD |
InterPro | IPR028619 | ATP-dependent RNA helicase DbpA |
InterPro | IPR028621 | ATP-dependent RNA helicase SrmB |
InterPro | IPR033867 | Ribosome assembly factor Mrt4 |
InterPro | IPR039770 | Ribosome biogenesis protein Rpf2 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000027 based on ALL annotations
The top 100 of 939 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
ribosomal large subunit assembly
|
1,219.92 | 100.00 | 159,797 | 159,797 |
preribosome, large subunit precursor
|
336.92 | 9.37 | 19,855 | 71,890 |
ribosome biogenesis
|
104.35 | 7.42 | 57,400 | 671,012 |
5S rRNA binding
|
175.00 | 5.74 | 13,937 | 97,155 |
guanosine tetraphosphate binding
|
202.64 | 5.30 | 11,552 | 69,545 |
ribosome binding
|
79.28 | 5.16 | 32,091 | 493,807 |
rRNA binding
|
60.63 | 4.83 | 101,214 | 2,036,482 |
cellular response to cold
|
984.23 | 4.64 | 7,492 | 9,286 |
cytoplasmic translation
|
101.13 | 4.56 | 14,738 | 177,789 |
RNA strand annealing activity
|
300.01 | 4.15 | 7,593 | 30,875 |
Totals | 1332991 | 155426370 |
No co-occurrence statistics for GO:0000027 based on MANUAL annotations
The top 100 of 321 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
ribosomal large subunit assembly
|
1,840.17 | 100.00 | 702 | 702 |
5S rRNA binding
|
608.07 | 23.11 | 305 | 923 |
ribosomal large subunit export from nucleus
|
251.29 | 7.33 | 96 | 703 |
preribosome, large subunit precursor
|
133.00 | 5.38 | 122 | 1,688 |
rRNA processing
|
81.55 | 3.70 | 129 | 2,911 |
regulation of signal transduction by p53 class mediator
|
408.93 | 2.35 | 18 | 81 |
cytosolic large ribosomal subunit
|
43.50 | 2.26 | 237 | 10,026 |
nucleolus
|
32.18 | 1.71 | 299 | 17,099 |
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
35.60 | 1.48 | 42 | 2,171 |
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
52.01 | 1.47 | 21 | 743 |
Totals | 2820 | 143877 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-05-18 | Deleted | SUBSET | gocheck_do_not_annotate |
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2023-11-08 | Added | SUBSET | gocheck_do_not_annotate |
2010-12-12 | Deleted | RELATION | is a GO:0042257 (ribosomal subunit assembly) |
2010-12-12 | Added | RELATION | is a GO:0022618 (protein-RNA complex assembly) |
2010-12-12 | Added | RELATION | part of GO:0042255 (ribosome assembly) |
2010-10-27 | Added | SYNONYM | 60S ribosomal subunit assembly |
2010-10-27 | Added | SYNONYM | 50S ribosomal subunit assembly |
2009-03-21 | Updated | TERM | ribosomal large subunit assembly |
2009-03-21 | Deleted | DEFINITION | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-03-21 | Updated | TERM | ribosomal large subunit assembly |
2002-02-06 | Updated | TERM | ribosomal large subunit assembly and maintenance |
2001-04-03 | Updated | TERM | ribosomal large subunit assembly and maintenance |
2001-03-30 | Added | TERM | ribosomal large subunit assembly and maintenance |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-10-27 | Added | SYNONYM | 60S ribosomal subunit assembly |
2010-10-27 | Added | SYNONYM | 50S ribosomal subunit assembly |
2009-03-21 | Deleted | DEFINITION | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit. |
2009-03-21 | Added | DEFINITION | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit. |
2008-05-13 | Added | DEFINITION | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit. |
2008-05-12 | Deleted | DEFINITION | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit. |
2007-12-27 | Updated | DEFINITION | The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit. |
2007-06-27 | Updated | DEFINITION | The aggregation and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit. |
2002-11-27 | Added | DEFINITION | The maintenance and assembly of the large ribosomal subunit from its constituent parts. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-12-12 | Deleted | RELATION | is a GO:0042257 (ribosomal subunit assembly) |
2010-12-12 | Added | RELATION | is a GO:0022618 (protein-RNA complex assembly) |
2010-12-12 | Added | RELATION | part of GO:0042255 (ribosome assembly) |
2008-04-01 | Updated | RELATION | part of GO:0042273 (ribosomal large subunit biogenesis) |
2008-04-01 | Updated | RELATION | is a GO:0042257 (ribosomal subunit assembly) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-05-18 | Deleted | SUBSET | gocheck_do_not_annotate |
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2023-11-08 | Added | SUBSET | gocheck_do_not_annotate |
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