This term is obsolete.

GO:0000245 JSON

spliceosomal complex assembly

Biological Process

Definition (GO:0000245 GONUTS page)

The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions. PMID:9476892

130,187 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
spliceosome assembly broad

Ancestor Chart

Ancestor chart for GO:0000245
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000245

Child Term Relationship to
GO:0000245
mRNA branch site recognition
part_of
U2-type prespliceosome assembly
is_a
cis assembly of pre-catalytic spliceosome
part_of
trans assembly of SL-containing precatalytic spliceosome
part_of
mRNA splice site recognition
part_of

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0000245 spliceosomal complex assembly Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A6KEH4 10116 A6KEH4_RAT GO:0000398 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F1R777 7955 MTA70_DANRE GO:0000398 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein F7FFC6 10116 F7FFC6_RAT GO:0000398 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q4V8G6 10116 Q4V8G6_RAT GO:0000398 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q86U44 9606 MTA70_HUMAN GO:0000398 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q8C3P7 10090 MTA70_MOUSE GO:0000398 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:28637692

Cross-references

Database ID Description
InterPro IPR009422 Gem-associated protein 6
InterPro IPR017364 Gem-associated protein 2
InterPro IPR033809 USP39
InterPro IPR038737 Splicing factor 3B subunit 1-like

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0000245 based on ALL annotations
The top 100 of 731 co-occurring terms
Co-occurring Term PR S% #Together #Compared
spliceosomal complex assembly
4,601.74 100.00 42,362 42,362
regulation of mRNA processing
3,047.94 36.67 19,108 28,849
U2-type catalytic step 2 spliceosome
965.14 8.10 4,939 23,549
post-mRNA release spliceosomal complex
711.58 7.20 5,029 32,522
Prp19 complex
565.81 6.37 4,949 40,250
U2-type prespliceosome
519.98 5.91 4,666 41,293
spliceosomal complex
289.25 5.71 16,232 258,238
SMN complex
955.03 5.19 2,743 13,217
U2 snRNP
327.87 4.50 4,617 64,800
precatalytic spliceosome
294.37 4.25 4,759 74,394
Totals 289219 46709846
No co-occurrence statistics for GO:0000245 based on MANUAL annotations
The top 100 of 326 co-occurring terms
Co-occurring Term PR S% #Together #Compared
spliceosomal complex assembly
1,216.38 100.00 1,062 1,062
poly-pyrimidine tract binding
1,101.63 22.08 240 265
regulation of mRNA processing
722.89 21.73 271 456
U2-type prespliceosome
328.15 20.21 474 1,757
pre-mRNA 3'-splice site binding
560.18 18.16 245 532
U2AF complex
560.18 18.16 245 532
commitment complex
452.06 16.79 249 670
U2-type catalytic step 2 spliceosome
245.70 8.75 142 703
U2 snRNP
136.10 8.09 240 2,145
post-mRNA release spliceosomal complex
188.73 7.58 137 883
Totals 5525 168846

Change Log

Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2012-03-17 Added DEFINITION The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2012-03-17 Added SYNONYM spliceosome assembly
2012-03-17 Updated TERM spliceosomal complex assembly
2012-03-17 Deleted DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2008-05-13 Added DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2008-05-12 Deleted DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2008-04-01 Updated RELATION part of GO:0000398 (mRNA splicing, via spliceosome)
2008-04-01 Updated RELATION is a GO:0022618 (protein-RNA complex assembly)
2007-12-27 Updated DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
Timestamp Action Category Detail
2012-03-17 Updated TERM spliceosomal complex assembly
2002-02-06 Updated TERM spliceosome assembly
2001-04-03 Updated TERM spliceosome assembly
2001-03-30 Added TERM spliceosome assembly
Timestamp Action Category Detail
2012-03-17 Added DEFINITION The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2012-03-17 Added SYNONYM spliceosome assembly
2012-03-17 Deleted DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2008-05-13 Added DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2008-05-12 Deleted DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2007-12-27 Updated DEFINITION The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2005-08-04 Updated DEFINITION The aggregation and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2003-08-21 Updated DEFINITION Formation of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
2001-08-06 Added DEFINITION Formation of the spliceosome, the ribonucleoprotein apparatus that catalyzes mRNA splicing.
Timestamp Action Category Detail
2008-04-01 Updated RELATION part of GO:0000398 (mRNA splicing, via spliceosome)
2008-04-01 Updated RELATION is a GO:0022618 (protein-RNA complex assembly)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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