GO:0000440
JSON
core TFIIH complex portion of NEF3 complex
Cellular Component
Definition (GO:0000440 GONUTS page)
The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). PMID:14500720 PMID:22308316 PMID:22572993 PMID:7813015
Secondary IDs
GO:0000442
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
SSL2-core TFIIH complex portion of NEF3 complex | exact |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0000440 | core TFIIH complex portion of NEF3 complex | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JW23 | 10116 | A0A0G2JW23_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K8T1 | 10116 | A0A0G2K8T1_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1B0GR71 | 10090 | A0A1B0GR71_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1B0GRK6 | 10090 | A0A1B0GRK6_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1D8PHF8 | 237561 | A0A1D8PHF8_CANAL | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y8H4 | 10116 | A0A8I5Y8H4_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A0E5 | 10116 | A0A8I6A0E5_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000440 based on ALL annotations
The top 0 of 0 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Totals | 0 | 0 |
No co-occurrence statistics for GO:0000440 based on MANUAL annotations
The top 0 of 0 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Totals | 0 | 0 |
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2015-06-25 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2015-04-24 | Added | RELATION | part of GO:0000112 (nucleotide-excision repair factor 3 complex) |
2014-06-05 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2014-05-16 | Added | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). |
2014-05-16 | Deleted | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. In humans, it is composed of ERCC2, p62, p55, p44, p34. |
2014-05-16 | Added | SECONDARY | GO:0000442 (SSL2-core TFIIH complex portion of NEF3 complex) |
2014-05-16 | Added | SYNONYM | SSL2-core TFIIH complex portion of NEF3 complex |
2014-05-16 | Deleted | RELATION | part of GO:0000442 (SSL2-core TFIIH complex portion of NEF3 complex) |
2014-03-08 | Deleted | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of ERCC2, p62, p55, p44, p34. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-04-01 | Added | TERM | core TFIIH complex portion of NEF3 complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-05-16 | Added | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). |
2014-05-16 | Deleted | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. In humans, it is composed of ERCC2, p62, p55, p44, p34. |
2014-05-16 | Added | SYNONYM | SSL2-core TFIIH complex portion of NEF3 complex |
2014-03-08 | Deleted | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of ERCC2, p62, p55, p44, p34. |
2014-03-08 | Added | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, Tfb4p and Tfb5p. In humans, it is composed of ERCC2, p62, p55, p44, p34. |
2009-03-23 | Deleted | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of XPD, p62, p55, p44, p34. |
2009-03-23 | Added | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of ERCC2, p62, p55, p44, p34. |
2008-05-13 | Added | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of XPD, p62, p55, p44, p34. |
2008-05-12 | Deleted | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of XPD, p62, p55, p44, p34. |
2007-07-27 | Updated | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3p, Tfb1p, Tfb2p, Ssl1p, and Tfb4p. In humans, it is composed of XPD, p62, p55, p44, p34. |
2007-04-20 | Added | DEFINITION | The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3). In S. cerevisiae, it is composed of Rad3, Tfb1, Tfb2, Ssl1, Tfb4. In humans, it is composed of XPD, p62, p55, p44, p34. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-06-25 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2015-04-24 | Added | RELATION | part of GO:0000112 (nucleotide-excision repair factor 3 complex) |
2014-06-05 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2014-05-16 | Deleted | RELATION | part of GO:0000442 (SSL2-core TFIIH complex portion of NEF3 complex) |
2013-02-02 | Deleted | RELATION | part of GO:0000112 (nucleotide-excision repair factor 3 complex) |
2012-10-29 | Added | RELATION | part of GO:0000112 (nucleotide-excision repair factor 3 complex) |
2009-06-11 | Deleted | RELATION | is a GO:0044428 (obsolete nuclear part) |
2008-10-21 | Added | RELATION | is a GO:0044428 (obsolete nuclear part) |
2008-04-01 | Updated | RELATION | is a GO:0000439 (transcription factor TFIIH core complex) |
2008-04-01 | Updated | RELATION | part of GO:0000442 (SSL2-core TFIIH complex portion of NEF3 complex) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2014-05-16 | Added | SECONDARY | GO:0000442 (SSL2-core TFIIH complex portion of NEF3 complex) |
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