This term is obsolete.

GO:0000462 JSON

maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Biological Process

Definition (GO:0000462 GONUTS page)

Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

Secondary IDs

GO:1990041

138,909 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
maturation of 18S rRNA narrow

Ancestor Chart

Ancestor chart for GO:0000462
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000462

Child Term Relationship to
GO:0000462
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein Q6MG08 10116 ABCF1_RAT GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q6P542 10090 ABCF1_MOUSE GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q767L0 9823 ABCF1_PIG GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q7YR37 9598 ABCF1_PANTR GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q8NE71-2 9606 ABCF1_HUMAN GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978

Cross-references

Database ID Description
InterPro IPR013949 U3 small nucleolar RNA-associated protein 6
InterPro IPR028160 Ribosome biogenesis protein Slx9-like
InterPro IPR046351 U3 small nucleolar RNA-associated protein 4

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0000462 based on ALL annotations
The top 100 of 1,343 co-occurring terms
Co-occurring Term PR S% #Together #Compared
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2,223.60 100.00 87,668 87,668
90S preribosome
1,022.42 24.28 29,780 64,767
small-subunit processome
630.24 22.55 45,966 162,176
U3 snoRNA binding
1,386.18 16.66 16,240 26,051
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
1,585.12 11.86 10,921 15,320
t-UTP complex
2,200.75 10.32 9,054 9,148
preribosome, small subunit precursor
628.65 10.20 12,065 42,675
Pwp2p-containing subcomplex of 90S preribosome
912.06 9.24 9,345 22,783
snoRNA binding
411.62 7.57 9,958 53,794
nucleolus
170.41 7.50 68,018 887,530
Totals 511992 39826880
No co-occurrence statistics for GO:0000462 based on MANUAL annotations
The top 100 of 615 co-occurring terms
Co-occurring Term PR S% #Together #Compared
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
516.51 100.00 2,501 2,501
small-subunit processome
130.89 18.68 1,039 4,100
U3 snoRNA binding
360.13 12.37 327 469
90S preribosome
173.12 8.12 242 722
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
323.58 8.11 213 340
Pwp2p-containing subcomplex of 90S preribosome
201.94 7.08 199 509
nucleolus
36.94 6.66 1,223 17,099
t-UTP complex
491.92 6.38 160 168
snoRNA binding
89.56 5.91 206 1,188
cytosolic small ribosomal subunit
38.82 5.50 425 5,655
Totals 9400 295744

Change Log

Timestamp Action Category Detail
2013-03-11 Deleted RELATION is a GO:0006364 (rRNA processing)
2013-02-23 Added SECONDARY GO:1990041 (maturation of 18S rRNA)
2013-02-23 Added RELATION is a GO:0006364 (rRNA processing)
2013-02-23 Added SYNONYM maturation of 18S rRNA
2008-05-13 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2008-05-12 Deleted DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2008-04-01 Updated RELATION is a GO:0030490 (maturation of SSU-rRNA)
2007-07-29 Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2007-07-29 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
Timestamp Action Category Detail
2007-07-29 Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Timestamp Action Category Detail
2013-02-23 Added SYNONYM maturation of 18S rRNA
2008-05-13 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2008-05-12 Deleted DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
Timestamp Action Category Detail
2013-03-11 Deleted RELATION is a GO:0006364 (rRNA processing)
2013-02-23 Added RELATION is a GO:0006364 (rRNA processing)
2008-04-01 Updated RELATION is a GO:0030490 (maturation of SSU-rRNA)
Timestamp Action Category Detail
Timestamp Action Category Detail
2013-02-23 Added SECONDARY GO:1990041 (maturation of 18S rRNA)
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