This term is obsolete.

GO:0000462 JSON

maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Biological Process

Definition (GO:0000462 GONUTS page)

Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.

Secondary IDs

GO:1990041

142,327 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
maturation of 18S rRNA narrow

Ancestor Chart

Ancestor chart for GO:0000462
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000462

Child Term Relationship to
GO:0000462
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
part_of

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein Q6MG08 10116 ABCF1_RAT GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q6P542 10090 ABCF1_MOUSE GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q767L0 9823 ABCF1_PIG GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q7YR37 9598 ABCF1_PANTR GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q8NE71-2 9606 ABCF1_HUMAN GO:0042254 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978

Cross-references

Database ID Description
InterPro IPR013949 U3 small nucleolar RNA-associated protein 6
InterPro IPR028160 Ribosome biogenesis protein Slx9-like
InterPro IPR046351 U3 small nucleolar RNA-associated protein 4

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0000462 based on ALL annotations
The top 100 of 836 co-occurring terms
Co-occurring Term PR S% #Together #Compared
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
2,193.99 100.00 90,317 90,317
90S preribosome
1,006.65 24.30 30,764 67,050
small-subunit processome
621.67 22.58 47,571 167,887
U3 snoRNA binding
1,369.23 16.70 16,774 26,878
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
1,561.80 11.89 11,280 15,846
t-UTP complex
2,172.10 10.31 9,324 9,418
preribosome, small subunit precursor
618.22 10.18 12,423 44,088
Pwp2p-containing subcomplex of 90S preribosome
898.73 9.27 9,669 23,604
nucleolus
170.11 7.59 70,242 905,948
snoRNA binding
406.10 7.58 10,267 55,469
Totals 538476 39118697
No co-occurrence statistics for GO:0000462 based on MANUAL annotations
The top 100 of 270 co-occurring terms
Co-occurring Term PR S% #Together #Compared
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
582.80 100.00 2,422 2,422
small-subunit processome
146.90 19.38 1,105 4,384
U3 snoRNA binding
408.78 13.61 350 499
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
367.07 8.92 228 362
90S preribosome
190.69 8.49 249 761
Pwp2p-containing subcomplex of 90S preribosome
227.35 7.73 213 546
t-UTP complex
556.60 7.00 170 178
snoRNA binding
98.51 6.18 215 1,272
nucleolus
37.36 5.99 1,149 17,922
cytosolic small ribosomal subunit
41.96 5.53 466 6,473
Totals 9066 240269

Change Log

Timestamp Action Category Detail
2013-03-11 Deleted RELATION is a GO:0006364 (rRNA processing)
2013-02-23 Added SECONDARY GO:1990041 (maturation of 18S rRNA)
2013-02-23 Added RELATION is a GO:0006364 (rRNA processing)
2013-02-23 Added SYNONYM maturation of 18S rRNA
2008-05-13 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2008-05-12 Deleted DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2008-04-01 Updated RELATION is a GO:0030490 (maturation of SSU-rRNA)
2007-07-29 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Timestamp Action Category Detail
2007-07-29 Added TERM maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Timestamp Action Category Detail
2013-02-23 Added SYNONYM maturation of 18S rRNA
2008-05-13 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2008-05-12 Deleted DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
2007-07-29 Added DEFINITION Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
Timestamp Action Category Detail
2013-03-11 Deleted RELATION is a GO:0006364 (rRNA processing)
2013-02-23 Added RELATION is a GO:0006364 (rRNA processing)
2008-04-01 Updated RELATION is a GO:0030490 (maturation of SSU-rRNA)
Timestamp Action Category Detail
Timestamp Action Category Detail
2013-02-23 Added SECONDARY GO:1990041 (maturation of 18S rRNA)
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