GO:0000462
JSON
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process
Definition (GO:0000462 GONUTS page)
Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.
Secondary IDs
GO:1990041
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
maturation of 18S rRNA | narrow |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0000462
Child Term | Relationship to GO:0000462 |
---|---|
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
part_of |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q6MG08 | 10116 | ABCF1_RAT | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q6P542 | 10090 | ABCF1_MOUSE | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q767L0 | 9823 | ABCF1_PIG | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q7YR37 | 9598 | ABCF1_PANTR | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q8NE71-2 | 9606 | ABCF1_HUMAN | GO:0042254 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:19570978 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR013949 | U3 small nucleolar RNA-associated protein 6 |
InterPro | IPR028160 | Ribosome biogenesis protein Slx9-like |
InterPro | IPR046351 | U3 small nucleolar RNA-associated protein 4 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000462 based on ALL annotations
The top 100 of 1,343 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
2,223.60 | 100.00 | 87,668 | 87,668 |
90S preribosome
|
1,022.42 | 24.28 | 29,780 | 64,767 |
small-subunit processome
|
630.24 | 22.55 | 45,966 | 162,176 |
U3 snoRNA binding
|
1,386.18 | 16.66 | 16,240 | 26,051 |
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
1,585.12 | 11.86 | 10,921 | 15,320 |
t-UTP complex
|
2,200.75 | 10.32 | 9,054 | 9,148 |
preribosome, small subunit precursor
|
628.65 | 10.20 | 12,065 | 42,675 |
Pwp2p-containing subcomplex of 90S preribosome
|
912.06 | 9.24 | 9,345 | 22,783 |
snoRNA binding
|
411.62 | 7.57 | 9,958 | 53,794 |
nucleolus
|
170.41 | 7.50 | 68,018 | 887,530 |
Totals | 511992 | 39826880 |
No co-occurrence statistics for GO:0000462 based on MANUAL annotations
The top 100 of 615 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
516.51 | 100.00 | 2,501 | 2,501 |
small-subunit processome
|
130.89 | 18.68 | 1,039 | 4,100 |
U3 snoRNA binding
|
360.13 | 12.37 | 327 | 469 |
90S preribosome
|
173.12 | 8.12 | 242 | 722 |
endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
|
323.58 | 8.11 | 213 | 340 |
Pwp2p-containing subcomplex of 90S preribosome
|
201.94 | 7.08 | 199 | 509 |
nucleolus
|
36.94 | 6.66 | 1,223 | 17,099 |
t-UTP complex
|
491.92 | 6.38 | 160 | 168 |
snoRNA binding
|
89.56 | 5.91 | 206 | 1,188 |
cytosolic small ribosomal subunit
|
38.82 | 5.50 | 425 | 5,655 |
Totals | 9400 | 295744 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-03-11 | Deleted | RELATION | is a GO:0006364 (rRNA processing) |
2013-02-23 | Added | SECONDARY | GO:1990041 (maturation of 18S rRNA) |
2013-02-23 | Added | RELATION | is a GO:0006364 (rRNA processing) |
2013-02-23 | Added | SYNONYM | maturation of 18S rRNA |
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-04-01 | Updated | RELATION | is a GO:0030490 (maturation of SSU-rRNA) |
2007-07-29 | Added | TERM | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-07-29 | Added | TERM | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-02-23 | Added | SYNONYM | maturation of 18S rRNA |
2008-05-13 | Added | DEFINITION | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2008-05-12 | Deleted | DEFINITION | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
2007-07-29 | Added | DEFINITION | Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-03-11 | Deleted | RELATION | is a GO:0006364 (rRNA processing) |
2013-02-23 | Added | RELATION | is a GO:0006364 (rRNA processing) |
2008-04-01 | Updated | RELATION | is a GO:0030490 (maturation of SSU-rRNA) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-02-23 | Added | SECONDARY | GO:1990041 (maturation of 18S rRNA) |
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link