This term is obsolete.
Note that this term can be used in place of the obsolete cellular component term 'centromere ; GO:0005698'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.

GO:0000779 JSON

condensed chromosome, centromeric region

Cellular Component

Definition (GO:0000779 GONUTS page)

The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.

Comments

Note that this term can be used in place of the obsolete cellular component term 'centromere ; GO:0005698'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.

Secondary IDs

GO:0000780

220,798 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
condensed chromosome, centric region exact
condensed nuclear chromosome, centromeric region narrow
condensed chromosome, pericentric region related
condensed chromosome, centromere related

Ancestor Chart

Ancestor chart for GO:0000779
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000779

Child Term Relationship to
GO:0000779
kinetochore
part_of

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0000779 condensed chromosome, centromeric region Only in Taxon 131567 cellular organisms

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I5Y5Z6 10116 A0A8I5Y5Z6_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y7L4 10116 A0A8I5Y7L4_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2T0 10116 A0A8I6A2T0_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6I4N6 10116 A6I4N6_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6ILF7 10116 A6ILF7_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A8QWW8 10116 A8QWW8_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D3ZS29 10116 D3ZS29_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7EEB9 10116 F7EEB9_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q13426 9606 XRCC4_HUMAN GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12589063
NOT-qualified manual protein Q14TE9 10116 Q14TE9_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0000779 based on ALL annotations
The top 100 of 747 co-occurring terms
Co-occurring Term PR S% #Together #Compared
condensed chromosome, centromeric region
13,299.88 100.00 14,899 14,899
meiotic chromosome condensation
9,718.41 43.24 7,663 10,487
centromeric DNA binding
12,038.40 23.92 3,655 4,038
spindle attachment to meiosis I kinetochore
12,459.49 21.96 3,321 3,545
mitotic chromosome condensation
3,373.99 20.64 7,829 30,861
condensin complex
3,120.18 19.35 7,820 33,333
kinetochore assembly
2,829.78 13.18 3,833 18,015
attachment of mitotic spindle microtubules to kinetochore
2,370.38 11.13 3,405 19,105
meiotic chromosome segregation
2,893.91 6.60 1,289 5,924
lateral element
4,105.75 6.23 1,078 3,492
Totals 105850 3795781
No co-occurrence statistics for GO:0000779 based on MANUAL annotations
The top 100 of 521 co-occurring terms
Co-occurring Term PR S% #Together #Compared
condensed chromosome, centromeric region
3,920.92 100.00 360 360
meiotic chromosome condensation
2,392.83 41.31 202 331
condensin complex
997.09 21.41 207 814
mitotic chromosome condensation
927.09 20.06 205 867
lateral element
1,055.63 7.69 35 130
chromosome, centromeric region
338.01 5.83 55 638
pericentric heterochromatin
277.31 4.32 36 509
kinetochore assembly
345.57 4.13 26 295
spindle attachment to meiosis I kinetochore
605.67 4.09 19 123
histone binding
133.94 3.33 208 6,089
Totals 2054 31292

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2020-10-23 Added SYNONYM condensed nuclear chromosome, centromeric region
2020-10-23 Added SECONDARY GO:0000780 (condensed nuclear chromosome, centromeric region)
2008-06-14 Added SYNONYM condensed chromosome, centric region
2008-06-14 Added DEFINITION The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Updated TERM condensed chromosome, centromeric region
2008-06-14 Added SYNONYM condensed chromosome, pericentric region
2008-05-13 Added DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-05-12 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
Timestamp Action Category Detail
2008-06-14 Updated TERM condensed chromosome, centromeric region
2003-04-03 Added TERM condensed chromosome, pericentric region
Timestamp Action Category Detail
2020-10-23 Added SYNONYM condensed nuclear chromosome, centromeric region
2008-06-14 Added SYNONYM condensed chromosome, centric region
2008-06-14 Added DEFINITION The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Added SYNONYM condensed chromosome, pericentric region
2008-05-13 Added DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-05-12 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-01-27 Updated DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2007-08-09 Deleted SYNONYM condensed chromosome, centromere
2007-08-09 Added SYNONYM condensed chromosome, centromere
2003-04-03 Added SYNONYM condensed chromosome, centromere
2003-04-03 Added DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0000775 (chromosome, centromeric region)
2008-04-01 Updated RELATION part of GO:0000793 (condensed chromosome)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2020-10-23 Added SECONDARY GO:0000780 (condensed nuclear chromosome, centromeric region)
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