This term is obsolete.
Note that this term can be used in place of the obsolete cellular component term 'centromere ; GO:0005698'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.

GO:0000779 JSON

condensed chromosome, centromeric region

Cellular Component

Definition (GO:0000779 GONUTS page)

The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.

Comments

Note that this term can be used in place of the obsolete cellular component term 'centromere ; GO:0005698'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.

Secondary IDs

GO:0000780

216,045 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
condensed chromosome, centric region exact
condensed nuclear chromosome, centromeric region narrow
condensed chromosome, pericentric region related
condensed chromosome, centromere related

Ancestor Chart

Ancestor chart for GO:0000779
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000779

Child Term Relationship to
GO:0000779
kinetochore
part_of

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0000779 condensed chromosome, centromeric region Only in Taxon 131567 cellular organisms

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I5Y5Z6 10116 A0A8I5Y5Z6_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y7L4 10116 A0A8I5Y7L4_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2T0 10116 A0A8I6A2T0_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6I4N6 10116 A6I4N6_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6ILF7 10116 A6ILF7_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A8QWW8 10116 A8QWW8_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D3ZS29 10116 D3ZS29_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7EEB9 10116 F7EEB9_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q13426 9606 XRCC4_HUMAN GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12589063
NOT-qualified manual protein Q14TE9 10116 Q14TE9_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0000779 based on ALL annotations
The top 100 of 765 co-occurring terms
Co-occurring Term PR S% #Together #Compared
condensed chromosome, centromeric region
13,382.22 100.00 14,567 14,567
meiotic chromosome condensation
9,803.69 42.68 7,364 10,052
centromeric DNA binding
11,987.25 23.69 3,549 3,962
spindle attachment to meiosis I kinetochore
12,420.00 21.69 3,214 3,463
mitotic chromosome condensation
3,386.58 20.47 7,532 29,763
condensin complex
3,142.93 19.25 7,523 32,032
kinetochore assembly
2,837.06 13.11 3,727 17,580
attachment of mitotic spindle microtubules to kinetochore
2,372.06 11.04 3,298 18,606
meiotic chromosome segregation
2,967.94 6.75 1,289 5,812
lateral element
4,039.84 6.06 1,027 3,402
Totals 103032 3746294
No co-occurrence statistics for GO:0000779 based on MANUAL annotations
The top 100 of 529 co-occurring terms
Co-occurring Term PR S% #Together #Compared
condensed chromosome, centromeric region
3,867.66 100.00 334 334
meiotic chromosome condensation
2,338.29 40.66 185 306
condensin complex
1,043.83 22.41 190 704
mitotic chromosome condensation
965.63 20.91 188 753
chromosome, centromeric region
355.13 6.26 55 599
lateral element
889.90 6.18 26 113
synaptonemal complex assembly
489.79 5.43 29 229
pericentric heterochromatin
290.07 4.63 36 480
kinetochore assembly
383.81 4.56 26 262
spindle attachment to meiosis I kinetochore
650.31 4.44 19 113
Totals 1995 28579

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2020-10-23 Added SECONDARY GO:0000780 (condensed nuclear chromosome, centromeric region)
2020-10-23 Added SYNONYM condensed nuclear chromosome, centromeric region
2008-06-14 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Added DEFINITION The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Added SYNONYM condensed chromosome, pericentric region
2008-06-14 Updated TERM condensed chromosome, centromeric region
2008-06-14 Added SYNONYM condensed chromosome, centric region
2008-05-13 Added DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-05-12 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
Timestamp Action Category Detail
2008-06-14 Updated TERM condensed chromosome, centromeric region
2003-04-03 Added TERM condensed chromosome, pericentric region
Timestamp Action Category Detail
2020-10-23 Added SYNONYM condensed nuclear chromosome, centromeric region
2008-06-14 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Added DEFINITION The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-06-14 Added SYNONYM condensed chromosome, pericentric region
2008-06-14 Added SYNONYM condensed chromosome, centric region
2008-05-13 Added DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-05-12 Deleted DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2008-01-27 Updated DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
2007-08-09 Deleted SYNONYM condensed chromosome, centromere
2007-08-09 Added SYNONYM condensed chromosome, centromere
2003-04-03 Added SYNONYM condensed chromosome, centromere
2003-04-03 Added DEFINITION The central region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore.
Timestamp Action Category Detail
2008-04-01 Updated RELATION part of GO:0000793 (condensed chromosome)
2008-04-01 Updated RELATION is a GO:0000775 (chromosome, centromeric region)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2020-10-23 Added SECONDARY GO:0000780 (condensed nuclear chromosome, centromeric region)
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