This term is obsolete.
Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.

GO:0000793 JSON

condensed chromosome

Cellular Component

Definition (GO:0000793 GONUTS page)

A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.

Comments

Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.

316,377 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
cytoplasmic mitotic chromosome related
mitotic chromosome related
metaphase chromosome related

Ancestor Chart

Ancestor chart for GO:0000793
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0000793

Child Term Relationship to
GO:0000793
condensed nuclear chromosome
is_a
condensed chromosome, centromeric region
part_of
Smc5-Smc6 complex
part_of

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0000793 condensed chromosome Only in Taxon 131567 cellular organisms

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I5Y5Z6 10116 A0A8I5Y5Z6_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y7L4 10116 A0A8I5Y7L4_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A2T0 10116 A0A8I6A2T0_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6I4N6 10116 A6I4N6_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6ILF7 10116 A6ILF7_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A8QWW8 10116 A8QWW8_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D3ZS29 10116 D3ZS29_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7EEB9 10116 F7EEB9_RAT GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q13426 9606 XRCC4_HUMAN GO:0000793 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12589063
NOT-qualified manual protein Q14TE9 10116 Q14TE9_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0000231 obsolete cytoplasmic mitotic chromosome consider GO:0000793
GO:0005695 obsolete chromatid consider GO:0000793
GO:0005708 obsolete mitotic chromosome consider GO:0000793
GO:0005710 obsolete metaphase chromosome consider GO:0000793

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0000793 based on ALL annotations
The top 100 of 1,448 co-occurring terms
Co-occurring Term PR S% #Together #Compared
condensed chromosome
8,381.94 100.00 23,257 23,257
mitotic DNA integrity checkpoint signaling
8,261.99 26.26 6,130 6,219
DNA topoisomerase binding
8,080.66 26.15 6,142 6,371
DNA double-strand break processing
6,759.81 24.79 6,130 7,601
condensin complex
2,581.68 21.72 9,866 32,032
histone H3K36 methyltransferase activity
4,150.68 20.78 6,130 12,379
mitotic chromosome condensation
2,535.73 20.46 9,004 29,763
histone H3K4 methyltransferase activity
1,919.00 13.96 6,130 26,775
single-stranded DNA endodeoxyribonuclease activity
1,594.75 12.42 6,130 32,219
double-strand break repair involved in meiotic recombination
3,403.81 10.82 2,988 7,358
Totals 177549 5734297
No co-occurrence statistics for GO:0000793 based on MANUAL annotations
The top 100 of 1,073 co-occurring terms
Co-occurring Term PR S% #Together #Compared
condensed chromosome
2,083.55 100.00 620 620
mitotic chromosome condensation
752.62 24.70 272 753
condensin complex
529.77 15.63 179 704
double-strand break repair involved in meiotic recombination
767.08 9.91 74 201
homologous chromosome pairing at meiosis
345.82 7.83 80 482
DNA polymerase binding
372.06 7.77 75 420
chromosome organization
370.89 7.28 68 382
mitotic intra-S DNA damage checkpoint signaling
236.53 5.91 68 599
interstrand cross-link repair
169.90 5.15 76 932
condensed nuclear chromosome
181.42 4.96 64 735
Totals 3232 61261

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2008-05-13 Added DEFINITION A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
2008-05-12 Deleted DEFINITION A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
2008-04-01 Updated RELATION is a GO:0005694 (chromosome)
2007-10-04 Deleted SYNONYM chromatid
2007-08-09 Added SYNONYM mitotic chromosome
2007-08-09 Added SYNONYM metaphase chromosome
2007-08-09 Deleted SYNONYM metaphase chromosome
2007-08-09 Deleted SYNONYM cytoplasmic mitotic chromosome
2007-08-09 Deleted SYNONYM chromatid
Timestamp Action Category Detail
2003-04-03 Added TERM condensed chromosome
Timestamp Action Category Detail
2008-05-13 Added DEFINITION A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
2008-05-12 Deleted DEFINITION A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
2007-10-04 Deleted SYNONYM chromatid
2007-08-09 Added SYNONYM mitotic chromosome
2007-08-09 Added SYNONYM metaphase chromosome
2007-08-09 Deleted SYNONYM metaphase chromosome
2007-08-09 Deleted SYNONYM cytoplasmic mitotic chromosome
2007-08-09 Deleted SYNONYM chromatid
2007-08-09 Added SYNONYM chromatid
2007-08-09 Added SYNONYM cytoplasmic mitotic chromosome
2007-08-09 Deleted SYNONYM mitotic chromosome
2005-08-10 Added SYNONYM mitotic chromosome
2005-08-10 Added SYNONYM cytoplasmic mitotic chromosome
2005-08-10 Added SYNONYM chromatid
2005-08-10 Added SYNONYM metaphase chromosome
2003-04-03 Added DEFINITION A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0005694 (chromosome)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
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