Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
GO:0000793
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condensed chromosome
Cellular Component
Definition (GO:0000793 GONUTS page)
A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.
Comments
Note that this term can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes an 'open mitosis' in which the nuclear envelope breaks down during mitosis.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
cytoplasmic mitotic chromosome | related |
mitotic chromosome | related |
metaphase chromosome | related |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0000793
Child Term | Relationship to GO:0000793 |
---|---|
condensed nuclear chromosome
|
is_a |
condensed chromosome, centromeric region
|
part_of |
Smc5-Smc6 complex
|
part_of |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0000793 | condensed chromosome | Only in Taxon | 131567 | cellular organisms |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5Y5Z6 | 10116 | A0A8I5Y5Z6_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y7L4 | 10116 | A0A8I5Y7L4_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A2T0 | 10116 | A0A8I6A2T0_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6I4N6 | 10116 | A6I4N6_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6ILF7 | 10116 | A6ILF7_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A8QWW8 | 10116 | A8QWW8_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | D3ZS29 | 10116 | D3ZS29_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F7EEB9 | 10116 | F7EEB9_RAT | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q13426 | 9606 | XRCC4_HUMAN | GO:0000793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12589063 | |
NOT-qualified manual | protein | Q14TE9 | 10116 | Q14TE9_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0000231 | obsolete cytoplasmic mitotic chromosome | consider GO:0000793 |
GO:0005695 | obsolete chromatid | consider GO:0000793 |
GO:0005708 | obsolete mitotic chromosome | consider GO:0000793 |
GO:0005710 | obsolete metaphase chromosome | consider GO:0000793 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0000793 based on ALL annotations
The top 100 of 1,448 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
condensed chromosome
|
8,381.94 | 100.00 | 23,257 | 23,257 |
mitotic DNA integrity checkpoint signaling
|
8,261.99 | 26.26 | 6,130 | 6,219 |
DNA topoisomerase binding
|
8,080.66 | 26.15 | 6,142 | 6,371 |
DNA double-strand break processing
|
6,759.81 | 24.79 | 6,130 | 7,601 |
condensin complex
|
2,581.68 | 21.72 | 9,866 | 32,032 |
histone H3K36 methyltransferase activity
|
4,150.68 | 20.78 | 6,130 | 12,379 |
mitotic chromosome condensation
|
2,535.73 | 20.46 | 9,004 | 29,763 |
histone H3K4 methyltransferase activity
|
1,919.00 | 13.96 | 6,130 | 26,775 |
single-stranded DNA endodeoxyribonuclease activity
|
1,594.75 | 12.42 | 6,130 | 32,219 |
double-strand break repair involved in meiotic recombination
|
3,403.81 | 10.82 | 2,988 | 7,358 |
Totals | 177549 | 5734297 |
No co-occurrence statistics for GO:0000793 based on MANUAL annotations
The top 100 of 1,073 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
condensed chromosome
|
2,083.55 | 100.00 | 620 | 620 |
mitotic chromosome condensation
|
752.62 | 24.70 | 272 | 753 |
condensin complex
|
529.77 | 15.63 | 179 | 704 |
double-strand break repair involved in meiotic recombination
|
767.08 | 9.91 | 74 | 201 |
homologous chromosome pairing at meiosis
|
345.82 | 7.83 | 80 | 482 |
DNA polymerase binding
|
372.06 | 7.77 | 75 | 420 |
chromosome organization
|
370.89 | 7.28 | 68 | 382 |
mitotic intra-S DNA damage checkpoint signaling
|
236.53 | 5.91 | 68 | 599 |
interstrand cross-link repair
|
169.90 | 5.15 | 76 | 932 |
condensed nuclear chromosome
|
181.42 | 4.96 | 64 | 735 |
Totals | 3232 | 61261 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2008-05-13 | Added | DEFINITION | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
2008-05-12 | Deleted | DEFINITION | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
2008-04-01 | Updated | RELATION | is a GO:0005694 (chromosome) |
2007-10-04 | Deleted | SYNONYM | chromatid |
2007-08-09 | Added | SYNONYM | mitotic chromosome |
2007-08-09 | Added | SYNONYM | metaphase chromosome |
2007-08-09 | Deleted | SYNONYM | metaphase chromosome |
2007-08-09 | Deleted | SYNONYM | cytoplasmic mitotic chromosome |
2007-08-09 | Deleted | SYNONYM | chromatid |
Timestamp | Action | Category | Detail |
---|---|---|---|
2003-04-03 | Added | TERM | condensed chromosome |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
2008-05-12 | Deleted | DEFINITION | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
2007-10-04 | Deleted | SYNONYM | chromatid |
2007-08-09 | Added | SYNONYM | mitotic chromosome |
2007-08-09 | Added | SYNONYM | metaphase chromosome |
2007-08-09 | Deleted | SYNONYM | metaphase chromosome |
2007-08-09 | Deleted | SYNONYM | cytoplasmic mitotic chromosome |
2007-08-09 | Deleted | SYNONYM | chromatid |
2007-08-09 | Added | SYNONYM | chromatid |
2007-08-09 | Added | SYNONYM | cytoplasmic mitotic chromosome |
2007-08-09 | Deleted | SYNONYM | mitotic chromosome |
2005-08-10 | Added | SYNONYM | mitotic chromosome |
2005-08-10 | Added | SYNONYM | cytoplasmic mitotic chromosome |
2005-08-10 | Added | SYNONYM | chromatid |
2005-08-10 | Added | SYNONYM | metaphase chromosome |
2003-04-03 | Added | DEFINITION | A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0005694 (chromosome) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
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