GO:0001139
JSON
RNA polymerase II complex recruiting activity
Molecular Function
Definition (GO:0001139 GONUTS page)
Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. PMID:16858867
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
core RNA polymerase II recruiting transcription factor activity | exact |
transcription factor activity, core RNA polymerase II recruiting | related |
Ancestor Chart
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P21333-1 | 9606 | FLNA_HUMAN | GO:0005515 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684 | |
NOT-qualified manual | protein | P63026 | 9913 | VAMP2_BOVIN | GO:0005515 | 2 NOT-qualified manual annotations exist with evidence code ECO:0000353 from this reference: PMID:20702699 | |
NOT-qualified manual | protein | Q61387 | 10090 | CO72L_MOUSE | GO:0030674 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:27775717 | |
NOT-qualified manual | protein | Q86V48 | 9606 | LUZP1_HUMAN | GO:0005515 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684 | |
NOT-qualified manual | protein | Q96327 | 3702 | EBP1_ARATH | GO:0006351 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15689342 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0001139 based on ALL annotations
The top 76 of 76 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
RNA polymerase II complex recruiting activity
|
63,066.57 | 100.00 | 3,091 | 3,091 |
regulation of mRNA 3'-end processing
|
49,063.14 | 73.60 | 2,880 | 3,702 |
transcription elongation by RNA polymerase I
|
9,366.81 | 14.69 | 2,880 | 19,391 |
RNA polymerase II preinitiation complex assembly
|
4,953.47 | 7.85 | 3,091 | 39,354 |
transcription open complex formation at RNA polymerase II promoter
|
27,088.07 | 5.82 | 195 | 454 |
transcriptional start site selection at RNA polymerase II promoter
|
7,305.58 | 4.27 | 196 | 1,692 |
transcription elongation by RNA polymerase II
|
2,192.85 | 3.47 | 2,880 | 82,829 |
positive regulation of RNA polymerase II transcription preinitiation complex assembly
|
5,252.69 | 3.20 | 153 | 1,837 |
maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
|
2,242.43 | 2.11 | 153 | 4,303 |
transcription antitermination
|
1,236.41 | 1.96 | 2,880 | 146,902 |
Totals | 38790 | 216621248 |
No co-occurrence statistics for GO:0001139 based on MANUAL annotations
The top 35 of 35 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
RNA polymerase II complex recruiting activity
|
322,949.75 | 100.00 | 4 | 4 |
transcription open complex formation at RNA polymerase II promoter
|
16,997.36 | 4.55 | 1 | 19 |
transcriptional start site selection at RNA polymerase II promoter
|
9,227.14 | 2.78 | 2 | 70 |
regulation of mRNA 3'-end processing
|
8,728.37 | 2.50 | 1 | 37 |
RNA polymerase II core promoter sequence-specific DNA binding
|
4,820.15 | 1.47 | 2 | 134 |
transcription antitermination
|
4,613.57 | 1.37 | 1 | 70 |
maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
|
2,713.86 | 0.82 | 1 | 119 |
RNA polymerase II core complex assembly
|
2,503.49 | 0.76 | 1 | 129 |
positive regulation of RNA polymerase II transcription preinitiation complex assembly
|
1,699.74 | 0.52 | 1 | 190 |
transcription preinitiation complex
|
1,046.84 | 0.32 | 2 | 617 |
Totals | 59 | 335186 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2022-03-04 | Added | RELATION | is a GO:0030674 (protein-macromolecule adaptor activity) |
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
2021-05-24 | Added | DEFINITION | Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
2018-07-12 | Added | RELATION | is a GO:0000993 (RNA polymerase II complex binding) |
2018-07-12 | Deleted | RELATION | is a GO:0000991 (obsolete transcription factor activity, core RNA polymerase II binding) |
2018-07-12 | Updated | TERM | RNA polymerase II complex recruiting activity |
2018-07-12 | Added | SYNONYM | transcription factor activity, core RNA polymerase II recruiting |
2015-07-25 | Added | SYNONYM | core RNA polymerase II recruiting transcription factor activity |
2015-07-25 | Updated | TERM | transcription factor activity, core RNA polymerase II recruiting |
2011-06-22 | Deleted | DEFINITION | Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-07-12 | Updated | TERM | RNA polymerase II complex recruiting activity |
2015-07-25 | Updated | TERM | transcription factor activity, core RNA polymerase II recruiting |
2011-01-23 | Added | TERM | core RNA polymerase II recruiting transcription factor activity |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
2021-05-24 | Added | DEFINITION | Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
2018-07-12 | Added | SYNONYM | transcription factor activity, core RNA polymerase II recruiting |
2015-07-25 | Added | SYNONYM | core RNA polymerase II recruiting transcription factor activity |
2011-06-22 | Deleted | DEFINITION | Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
2011-06-22 | Added | DEFINITION | Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
2011-01-23 | Added | DEFINITION | Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-03-04 | Added | RELATION | is a GO:0030674 (protein-macromolecule adaptor activity) |
2018-07-12 | Added | RELATION | is a GO:0000993 (RNA polymerase II complex binding) |
2018-07-12 | Deleted | RELATION | is a GO:0000991 (obsolete transcription factor activity, core RNA polymerase II binding) |
2011-01-23 | Added | RELATION | part of GO:0051123 (RNA polymerase II preinitiation complex assembly) |
2011-01-23 | Added | RELATION | is a GO:0000991 (obsolete transcription factor activity, core RNA polymerase II binding) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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