This term is obsolete.

GO:0001139 JSON

RNA polymerase II complex recruiting activity

Molecular Function

Definition (GO:0001139 GONUTS page)

Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase. PMID:16858867

3,094 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
core RNA polymerase II recruiting transcription factor activity exact
transcription factor activity, core RNA polymerase II recruiting related

Ancestor Chart

Ancestor chart for GO:0001139
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Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P21333-1 9606 FLNA_HUMAN GO:0005515 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684
NOT-qualified manual protein P63026 9913 VAMP2_BOVIN GO:0005515 2 NOT-qualified manual annotations exist with evidence code ECO:0000353 from this reference: PMID:20702699
NOT-qualified manual protein Q61387 10090 CO72L_MOUSE GO:0030674 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:27775717
NOT-qualified manual protein Q86V48 9606 LUZP1_HUMAN GO:0005515 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684
NOT-qualified manual protein Q96327 3702 EBP1_ARATH GO:0006351 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15689342

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0001139 based on ALL annotations
The top 76 of 76 co-occurring terms
Co-occurring Term PR S% #Together #Compared
RNA polymerase II complex recruiting activity
63,066.57 100.00 3,091 3,091
regulation of mRNA 3'-end processing
49,063.14 73.60 2,880 3,702
transcription elongation by RNA polymerase I
9,366.81 14.69 2,880 19,391
RNA polymerase II preinitiation complex assembly
4,953.47 7.85 3,091 39,354
transcription open complex formation at RNA polymerase II promoter
27,088.07 5.82 195 454
transcriptional start site selection at RNA polymerase II promoter
7,305.58 4.27 196 1,692
transcription elongation by RNA polymerase II
2,192.85 3.47 2,880 82,829
positive regulation of RNA polymerase II transcription preinitiation complex assembly
5,252.69 3.20 153 1,837
maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
2,242.43 2.11 153 4,303
transcription antitermination
1,236.41 1.96 2,880 146,902
Totals 38790 216621248
No co-occurrence statistics for GO:0001139 based on MANUAL annotations
The top 35 of 35 co-occurring terms
Co-occurring Term PR S% #Together #Compared
RNA polymerase II complex recruiting activity
322,949.75 100.00 4 4
transcription open complex formation at RNA polymerase II promoter
16,997.36 4.55 1 19
transcriptional start site selection at RNA polymerase II promoter
9,227.14 2.78 2 70
regulation of mRNA 3'-end processing
8,728.37 2.50 1 37
RNA polymerase II core promoter sequence-specific DNA binding
4,820.15 1.47 2 134
transcription antitermination
4,613.57 1.37 1 70
maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II
2,713.86 0.82 1 119
RNA polymerase II core complex assembly
2,503.49 0.76 1 129
positive regulation of RNA polymerase II transcription preinitiation complex assembly
1,699.74 0.52 1 190
transcription preinitiation complex
1,046.84 0.32 2 617
Totals 59 335186

Change Log

Timestamp Action Category Detail
2022-03-04 Added RELATION is a GO:0030674 (protein-macromolecule adaptor activity)
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
2021-05-24 Added DEFINITION Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
2018-07-12 Added RELATION is a GO:0000993 (RNA polymerase II complex binding)
2018-07-12 Deleted RELATION is a GO:0000991 (obsolete transcription factor activity, core RNA polymerase II binding)
2018-07-12 Updated TERM RNA polymerase II complex recruiting activity
2018-07-12 Added SYNONYM transcription factor activity, core RNA polymerase II recruiting
2015-07-25 Added SYNONYM core RNA polymerase II recruiting transcription factor activity
2015-07-25 Updated TERM transcription factor activity, core RNA polymerase II recruiting
2011-06-22 Deleted DEFINITION Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
Timestamp Action Category Detail
2018-07-12 Updated TERM RNA polymerase II complex recruiting activity
2015-07-25 Updated TERM transcription factor activity, core RNA polymerase II recruiting
2011-01-23 Added TERM core RNA polymerase II recruiting transcription factor activity
Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
2021-05-24 Added DEFINITION Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
2018-07-12 Added SYNONYM transcription factor activity, core RNA polymerase II recruiting
2015-07-25 Added SYNONYM core RNA polymerase II recruiting transcription factor activity
2011-06-22 Deleted DEFINITION Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
2011-06-22 Added DEFINITION Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
2011-01-23 Added DEFINITION Interacting selectively and non-covalently with an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.
Timestamp Action Category Detail
2022-03-04 Added RELATION is a GO:0030674 (protein-macromolecule adaptor activity)
2018-07-12 Added RELATION is a GO:0000993 (RNA polymerase II complex binding)
2018-07-12 Deleted RELATION is a GO:0000991 (obsolete transcription factor activity, core RNA polymerase II binding)
2011-01-23 Added RELATION part of GO:0051123 (RNA polymerase II preinitiation complex assembly)
2011-01-23 Added RELATION is a GO:0000991 (obsolete transcription factor activity, core RNA polymerase II binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
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