An instance of intramembranous ossification may also be classified as metaplastic; the former classifies based on tissue type location, and the latter based on mechanism/cell division.
GO:0001957
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intramembranous ossification
Biological Process
Definition (GO:0001957 GONUTS page)
Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.
Comments
An instance of intramembranous ossification may also be classified as metaplastic; the former classifies based on tissue type location, and the latter based on mechanism/cell division.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
dermal ossification | narrow |
intramembranous bone ossification | related |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0001957
Child Term | Relationship to GO:0001957 |
---|---|
perichondral ossification
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0001957 | intramembranous ossification | Only in Taxon | 7742 | Vertebrata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
IEA Review | protein | Q54VU2 | 44689 | Q54VU2_DICDI | GO:0001503 | To remove over-annotation from InterPro. "..it has been raised by the Dicty database as the protein are found matching InterPro entries to which the GO terms have been assigned, but are invertebrates." | IPR002038 |
NOT-qualified manual | protein | O35217 | 10116 | MINP1_RAT | GO:0001503 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q9Z2L6 | 10090 | MINP1_MOUSE | GO:0001503 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10938126 |
Cross-references
Database | ID | Description |
---|---|---|
Wikipedia | Intramembranous_ossification |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0001957 based on ALL annotations
The top 100 of 337 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
intramembranous ossification
|
319,571.78 | 100.00 | 610 | 610 |
bone trabecula formation
|
78,077.20 | 15.06 | 172 | 704 |
regulation of mismatch repair
|
284,063.78 | 12.90 | 80 | 90 |
positive regulation of endothelial cell chemotaxis to fibroblast growth factor
|
103,772.38 | 11.10 | 88 | 271 |
type 1 fibroblast growth factor receptor binding
|
84,705.77 | 10.30 | 88 | 332 |
negative regulation of osteoblast proliferation
|
47,078.38 | 10.18 | 151 | 1,025 |
type 2 fibroblast growth factor receptor binding
|
77,259.11 | 9.93 | 88 | 364 |
tooth mineralization
|
99,775.81 | 9.06 | 69 | 221 |
motor learning
|
60,170.42 | 9.02 | 90 | 478 |
collagen type I trimer
|
83,669.70 | 8.86 | 72 | 275 |
Totals | 8934 | 500132 |
No co-occurrence statistics for GO:0001957 based on MANUAL annotations
The top 100 of 288 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
intramembranous ossification
|
58,718.13 | 100.00 | 22 | 22 |
chondrocyte activation
|
58,718.14 | 9.09 | 2 | 2 |
regulation of extracellular matrix assembly
|
11,743.63 | 8.82 | 3 | 15 |
lamellipodium organization
|
11,009.65 | 8.57 | 3 | 16 |
bone trabecula formation
|
7,829.09 | 8.33 | 4 | 30 |
regulation of chondrocyte development
|
29,359.07 | 8.33 | 2 | 4 |
semicircular canal development
|
9,033.56 | 6.06 | 2 | 13 |
negative regulation of inflammatory response to wounding
|
5,338.01 | 5.77 | 3 | 33 |
endochondral ossification
|
3,570.70 | 5.59 | 9 | 148 |
negative regulation of osteoblast proliferation
|
4,296.45 | 5.00 | 3 | 41 |
Totals | 211 | 7859 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2014-05-08 | Added | SYNONYM | intramembranous bone ossification |
2011-12-21 | Added | RELATION | is a GO:0036072 (direct ossification) |
2011-12-21 | Deleted | RELATION | is a GO:0001503 (ossification) |
2011-12-21 | Added | DEFINITION | Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells. |
2011-12-21 | Deleted | DEFINITION | The formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2011-12-21 | Added | SYNONYM | dermal ossification |
2009-03-02 | Added | XREF | Wikipedia:Intramembranous_ossification |
2009-01-12 | Deleted | DEFINITION | The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2009-01-12 | Added | DEFINITION | The formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-08-15 | Added | TERM | intramembranous ossification |
Timestamp | Action | Category | Detail |
---|---|---|---|
2014-05-08 | Added | SYNONYM | intramembranous bone ossification |
2011-12-21 | Added | DEFINITION | Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells. |
2011-12-21 | Deleted | DEFINITION | The formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2011-12-21 | Added | SYNONYM | dermal ossification |
2009-01-12 | Deleted | DEFINITION | The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2009-01-12 | Added | DEFINITION | The formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2008-05-13 | Added | DEFINITION | The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2008-05-12 | Deleted | DEFINITION | The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
2005-08-16 | Added | DEFINITION | The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-12-21 | Added | RELATION | is a GO:0036072 (direct ossification) |
2011-12-21 | Deleted | RELATION | is a GO:0001503 (ossification) |
2008-04-01 | Updated | RELATION | is a GO:0001503 (ossification) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-03-02 | Added | XREF | Wikipedia:Intramembranous_ossification |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
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