GO:0001958
JSON
endochondral ossification
Biological Process
Definition (GO:0001958 GONUTS page)
Replacement ossification wherein bone tissue replaces cartilage.
Ancestor Chart
Ancestor chart for GO:0001958
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0001958 | endochondral ossification | Only in Taxon | 7742 | Vertebrata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
IEA Review | protein | Q54VU2 | 44689 | Q54VU2_DICDI | GO:0001503 | To remove over-annotation from InterPro. "..it has been raised by the Dicty database as the protein are found matching InterPro entries to which the GO terms have been assigned, but are invertebrates." | IPR002038 |
NOT-qualified manual | protein | O35217 | 10116 | MINP1_RAT | GO:0001503 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q9Z2L6 | 10090 | MINP1_MOUSE | GO:0001503 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10938126 |
Cross-references
Database | ID | Description |
---|---|---|
Wikipedia | Endochondral_ossification |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0001958 based on ALL annotations
The top 100 of 1,313 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
endochondral ossification
|
69,620.99 | 100.00 | 2,800 | 2,800 |
cartilage development involved in endochondral bone morphogenesis
|
35,610.25 | 13.20 | 423 | 827 |
bone growth
|
33,552.29 | 9.03 | 280 | 581 |
chondrocyte proliferation
|
12,260.88 | 8.58 | 401 | 2,277 |
intramembranous ossification
|
29,788.66 | 8.29 | 261 | 610 |
growth plate cartilage development
|
19,665.00 | 8.09 | 285 | 1,009 |
regulation of cartilage development
|
18,028.77 | 7.18 | 253 | 977 |
cellular response to BMP stimulus
|
8,105.02 | 7.12 | 434 | 3,728 |
bone morphogenesis
|
8,527.70 | 6.97 | 390 | 3,184 |
chondrocyte development
|
9,398.02 | 6.92 | 348 | 2,578 |
Totals | 24522 | 226615 |
No co-occurrence statistics for GO:0001958 based on MANUAL annotations
The top 100 of 1,175 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
endochondral ossification
|
8,728.37 | 100.00 | 148 | 148 |
cartilage development involved in endochondral bone morphogenesis
|
4,246.24 | 10.78 | 18 | 37 |
tissue homeostasis
|
1,572.19 | 10.36 | 29 | 161 |
deltoid tuberosity development
|
7,273.64 | 9.93 | 15 | 18 |
tendon cell differentiation
|
6,890.82 | 9.87 | 15 | 19 |
cellular response to BMP stimulus
|
1,745.67 | 9.84 | 24 | 120 |
chondrocyte differentiation
|
994.63 | 9.26 | 49 | 430 |
epithelium development
|
1,545.65 | 7.49 | 17 | 96 |
secondary heart field specification
|
2,063.07 | 6.84 | 13 | 55 |
glial cell fate specification
|
3,556.00 | 6.71 | 11 | 27 |
Totals | 1394 | 10701 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2011-12-21 | Added | DEFINITION | Replacement ossification wherein bone tissue replaces cartilage. |
2011-12-21 | Added | RELATION | is a GO:0036075 (replacement ossification) |
2011-12-21 | Deleted | RELATION | is a GO:0001503 (ossification) |
2011-12-21 | Deleted | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
2009-03-02 | Added | XREF | Wikipedia:Endochondral_ossification |
2008-11-03 | Added | RELATION | part of GO:0060350 (endochondral bone morphogenesis) |
2008-05-13 | Added | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
2008-05-12 | Deleted | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
2008-04-01 | Updated | RELATION | is a GO:0001503 (ossification) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-08-15 | Added | TERM | endochondral ossification |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-12-21 | Added | DEFINITION | Replacement ossification wherein bone tissue replaces cartilage. |
2011-12-21 | Deleted | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
2008-05-13 | Added | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
2008-05-12 | Deleted | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
2005-08-16 | Added | DEFINITION | The formation of bone by the replacement of cartilage tissue with mineralized bone. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-12-21 | Added | RELATION | is a GO:0036075 (replacement ossification) |
2011-12-21 | Deleted | RELATION | is a GO:0001503 (ossification) |
2008-11-03 | Added | RELATION | part of GO:0060350 (endochondral bone morphogenesis) |
2008-04-01 | Updated | RELATION | is a GO:0001503 (ossification) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-03-02 | Added | XREF | Wikipedia:Endochondral_ossification |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
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