This term is obsolete.

GO:0004790 JSON

thioether S-methyltransferase activity

Molecular Function

Definition (GO:0004790 GONUTS page)

Catalysis of the reaction: S-adenosyl-L-methionine(1+) + dimethyl sulfide = S-adenosyl-L-homocysteine + trimethylsulfonium.

annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
S-adenosyl-L-methionine:dimethyl-sulfide S-methyltransferase activity related
thioether methyltransferase activity related
S-adenosyl-L-methionine:thioether S-methyltransferase activity related

Ancestor Chart

Ancestor chart for GO:0004790
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Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating to catalytic activities using the IPI evidence code Link
Describing enzyme functions that catalyse multi-stage reactions Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein Q9VNA3 7227 Q9VNA3_DROME GO:0016740 Requested by Helen Attrill. https://github.com/geneontology/go-annotation/issues/3377PMID:28597544: 'SDF2 and SDF2L1 associate with ERdj3 and act as components in the BiP chaperone cycle to prevent the aggregation of misfolded proteins.'They are not enzymes and are ER resident proteins, not membrane or extracellular proteins. IPR016093|IPR036300
NOT-qualified manual protein A0A8I5YBY9 10116 A0A8I5YBY9_RAT GO:0008757 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AGH5 10116 A0A8I6AGH5_RAT GO:0008168 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A2VDP2 9913 PCMD1_BOVIN GO:0008757 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein A6JFH4 10116 A6JFH4_RAT GO:0008757 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JFH5 10116 A6JFH5_RAT GO:0008757 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A7XRZ1 227321 TDIE_EMENI GO:0008757 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17704773
NOT-qualified manual protein D3Z930 10116 D3Z930_RAT GO:0008168 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D4A629 10116 D4A629_RAT GO:0008757 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P02521 9031 ARLY1_CHICK GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884

Cross-references

Database ID Description
EC 2.1.1.96
KEGG_REACTION R02572
MetaCyc THIOETHER-S-METHYLTRANSFERASE-RXN
RHEA 19613

Cross-Ontology Relations

Relation Other Ontology ID Term
has_participant CHEBI CHEBI:57856 S-adenosyl-L-homocysteine zwitterion
has_participant CHEBI CHEBI:59789 S-adenosyl-L-methionine zwitterion
has_participant CHEBI CHEBI:17434 trimethylsulfonium
has_participant CHEBI CHEBI:17437 dimethyl sulfide

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0004790 based on ALL annotations
The top 12 of 12 co-occurring terms
Co-occurring Term PR S% #Together #Compared
GO:0004790
5,828,084.50 100.00 34 34
GO:0030748
1,329,898.40 22.82 34 149
GO:0098615
5,828,084.50 2.94 1 1
GO:0009308
4,450.12 0.08 17 22,264
GO:0008170
837.30 0.01 33 229,698
GO:0009636
326.94 0.01 4 71,305
GO:0008757
210.74 0.00 22 608,428
GO:0005515
139.32 0.00 1 41,833
GO:0032259
54.40 0.00 34 3,642,626
GO:0008168
52.27 0.00 34 3,790,987
Totals 252 47900491
No co-occurrence statistics for GO:0004790 based on MANUAL annotations
The top 7 of 7 co-occurring terms
Co-occurring Term PR S% #Together #Compared
GO:0004790
470,511.00 100.00 3 3
GO:0098615
470,511.03 33.33 1 1
GO:0030748
117,627.75 25.00 3 12
GO:0008170
4,459.82 0.94 2 211
GO:0009308
3,835.69 0.82 3 368
GO:0032259
583.04 0.12 3 2,421
GO:0005829
15.76 0.00 3 89,580
Totals 18 92596

Change Log

Timestamp Action Category Detail
2020-10-08 Deleted SYNONYM thioether methyltransferase activity
2020-10-08 Deleted SYNONYM S-adenosyl-L-methionine:dimethyl-sulfide S-methyltransferase activity
2020-10-08 Added SYNONYM thioether methyltransferase activity
2020-10-08 Added SYNONYM S-adenosyl-L-methionine:thioether S-methyltransferase activity
2020-10-08 Added SYNONYM S-adenosyl-L-methionine:dimethyl-sulfide S-methyltransferase activity
2020-10-08 Deleted SYNONYM S-adenosyl-L-methionine:thioether S-methyltransferase activity
2019-06-20 Added XREF KEGG_REACTION:R02572
2019-06-20 Deleted XREF KEGG:R02572
2018-07-13 Added XREF RHEA:19613
2018-07-13 Deleted XREF RHEA:19616
Timestamp Action Category Detail
2003-03-19 Updated TERM thioether S-methyltransferase activity
2002-02-06 Updated TERM thioether S-methyltransferase
2001-04-03 Updated TERM thioether S-methyltransferase
2001-03-30 Added TERM thioether S-methyltransferase
Timestamp Action Category Detail
2020-10-08 Deleted SYNONYM thioether methyltransferase activity
2020-10-08 Deleted SYNONYM S-adenosyl-L-methionine:dimethyl-sulfide S-methyltransferase activity
2020-10-08 Added SYNONYM thioether methyltransferase activity
2020-10-08 Added SYNONYM S-adenosyl-L-methionine:thioether S-methyltransferase activity
2020-10-08 Added SYNONYM S-adenosyl-L-methionine:dimethyl-sulfide S-methyltransferase activity
2020-10-08 Deleted SYNONYM S-adenosyl-L-methionine:thioether S-methyltransferase activity
2010-10-11 Deleted DEFINITION Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl sulfide = S-adenosyl-L-homocysteine + trimethylsulfonium.
2010-10-11 Added DEFINITION Catalysis of the reaction: S-adenosyl-L-methionine(1+) + dimethyl sulfide = S-adenosyl-L-homocysteine + trimethylsulfonium.
2008-05-13 Added DEFINITION Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl sulfide = S-adenosyl-L-homocysteine + trimethylsulfonium.
2008-05-12 Deleted DEFINITION Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl sulfide = S-adenosyl-L-homocysteine + trimethylsulfonium.
2007-11-08 Added SYNONYM S-adenosyl-L-methionine:thioether S-methyltransferase activity
2007-11-08 Added SYNONYM S-adenosyl-L-methionine:dimethyl-sulfide S-methyltransferase activity
2007-11-08 Added SYNONYM thioether methyltransferase activity
2002-11-27 Added DEFINITION Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl sulfide = S-adenosyl-L-homocysteine + trimethylsulfonium.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0008172 (S-methyltransferase activity)
2008-04-01 Updated RELATION is a GO:0008757 (S-adenosylmethionine-dependent methyltransferase activity)
Timestamp Action Category Detail
2019-06-20 Added XREF KEGG_REACTION:R02572
2019-06-20 Deleted XREF KEGG:R02572
2018-07-13 Added XREF RHEA:19613
2018-07-13 Deleted XREF RHEA:19616
2010-10-11 Added XREF KEGG:R02572
2010-10-11 Added XREF RHEA:19616
2003-10-27 Added XREF MetaCyc:THIOETHER-S-METHYLTRANSFERASE-RXN
2001-03-30 Added XREF EC:2.1.1.96
Timestamp Action Category Detail
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