This term is obsolete.

GO:0005673 JSON

transcription factor TFIIE complex

Cellular Component

Definition (GO:0005673 GONUTS page)

A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH. PMID:16547462

10,274 annotations

Ancestor Chart

Ancestor chart for GO:0005673
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0005673 transcription factor TFIIE complex Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2JW23 10116 A0A0G2JW23_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K8T1 10116 A0A0G2K8T1_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1B0GR71 10090 A0A1B0GR71_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1B0GRK6 10090 A0A1B0GRK6_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1D8PHF8 237561 A0A1D8PHF8_CANAL GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y8H4 10116 A0A8I5Y8H4_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A0E5 10116 A0A8I6A0E5_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Cross-references

Database ID Description
InterPro IPR016656 Transcription initiation factor TFIIE, beta subunit

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0005673 based on ALL annotations
The top 100 of 107 co-occurring terms
Co-occurring Term PR S% #Together #Compared
transcription factor TFIIE complex
19,609.59 100.00 10,105 10,105
TFIIH-class transcription factor complex binding
18,839.84 48.43 4,993 5,197
transcription initiation at RNA polymerase II promoter
2,037.37 10.39 10,105 97,260
RNA polymerase II general transcription initiation factor activity
96.69 0.43 324 65,708
transcription open complex formation at RNA polymerase II promoter
1,644.95 0.36 38 453
transcription factor TFIID complex
54.64 0.24 182 65,322
transcription preinitiation complex
50.63 0.19 76 29,434
mRNA transcription by RNA polymerase II
142.26 0.19 26 3,584
translation initiation factor activity
35.85 0.18 816 446,359
RNA polymerase II complex binding
39.83 0.17 89 43,817
Totals 36128 210282607
No co-occurrence statistics for GO:0005673 based on MANUAL annotations
The top 21 of 21 co-occurring terms
Co-occurring Term PR S% #Together #Compared
transcription factor TFIIE complex
5,346.72 100.00 264 264
TFIIH-class transcription factor complex binding
4,832.61 50.54 141 156
transcription initiation at RNA polymerase II promoter
730.23 13.66 264 1,933
mRNA transcription by RNA polymerase II
54.19 0.54 3 296
transcription open complex formation at RNA polymerase II promoter
281.41 0.35 1 19
RNA polymerase II general transcription initiation factor activity
18.88 0.32 8 2,266
transcription factor TFIID complex
17.84 0.29 6 1,798
transcription by RNA polymerase II
16.60 0.28 8 2,577
RNA polymerase II complex binding
15.48 0.24 4 1,382
transcription preinitiation complex
15.87 0.21 2 674
Totals 735 613079

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2019-09-12 Deleted RELATION is a GO:0044451 (obsolete nucleoplasm part)
2014-05-11 Added RELATION is a GO:0090575 (RNA polymerase II transcription regulator complex)
2014-05-11 Deleted RELATION is a GO:0044798 (nuclear transcription factor complex)
2013-09-05 Added RELATION is a GO:0044451 (obsolete nucleoplasm part)
2013-08-31 Added RELATION is a GO:0044798 (nuclear transcription factor complex)
2013-08-31 Deleted RELATION is a GO:0005667 (transcription regulator complex)
2008-05-13 Added DEFINITION A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.
2008-05-12 Deleted DEFINITION A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.
2008-04-01 Updated RELATION is a GO:0005667 (transcription regulator complex)
Timestamp Action Category Detail
2002-12-14 Updated TERM transcription factor TFIIE complex
2002-02-06 Updated TERM transcription factor TFIIE
2001-04-03 Updated TERM transcription factor TFIIE
2001-03-30 Added TERM transcription factor TFIIE
Timestamp Action Category Detail
2008-05-13 Added DEFINITION A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.
2008-05-12 Deleted DEFINITION A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.
2005-03-25 Updated DEFINITION A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH.
2003-03-26 Added DEFINITION A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA Pol II and TFIIH.
Timestamp Action Category Detail
2019-09-12 Deleted RELATION is a GO:0044451 (obsolete nucleoplasm part)
2014-05-11 Added RELATION is a GO:0090575 (RNA polymerase II transcription regulator complex)
2014-05-11 Deleted RELATION is a GO:0044798 (nuclear transcription factor complex)
2013-09-05 Added RELATION is a GO:0044451 (obsolete nucleoplasm part)
2013-08-31 Added RELATION is a GO:0044798 (nuclear transcription factor complex)
2013-08-31 Deleted RELATION is a GO:0005667 (transcription regulator complex)
2008-04-01 Updated RELATION is a GO:0005667 (transcription regulator complex)
2008-04-01 Updated RELATION part of GO:0016591 (RNA polymerase II, holoenzyme)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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