This term is obsolete.

GO:0005683 JSON

U7 snRNP

Cellular Component

Definition (GO:0005683 GONUTS page)

A ribonucleoprotein complex that contains the U7 snRNA and is required for the 3'-end processing of replication-dependent histone pre-mRNAs. PMID:12872004

1,848 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
snRNP U7 exact

Ancestor Chart

Ancestor chart for GO:0005683
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0005683 U7 snRNP Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2JW23 10116 A0A0G2JW23_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K8T1 10116 A0A0G2K8T1_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1B0GR71 10090 A0A1B0GR71_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1B0GRK6 10090 A0A1B0GRK6_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1D8PHF8 237561 A0A1D8PHF8_CANAL GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y8H4 10116 A0A8I5Y8H4_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A0E5 10116 A0A8I6A0E5_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0005683 based on ALL annotations
The top 75 of 75 co-occurring terms
Co-occurring Term PR S% #Together #Compared
U7 snRNP
107,522.77 100.00 1,813 1,813
U7 snRNA binding
62,302.54 52.99 1,561 2,694
mRNA 3'-end processing by stem-loop binding and cleavage
10,603.90 9.64 1,465 14,855
histone pre-mRNA DCP binding
17,974.44 7.61 222 1,328
methylosome
8,977.89 6.13 339 4,060
U2-type precatalytic spliceosome
7,252.33 5.22 339 5,026
SMN-Sm protein complex
5,783.91 4.36 339 6,302
positive regulation of G1/S transition of mitotic cell cycle
6,273.04 3.80 178 3,051
cytoplasmic U snRNP body
8,172.75 3.22 96 1,263
histone pre-mRNA 3'end processing complex
5,171.64 3.16 153 3,181
Totals 14499 204991105
No co-occurrence statistics for GO:0005683 based on MANUAL annotations
The top 56 of 56 co-occurring terms
Co-occurring Term PR S% #Together #Compared
U7 snRNP
16,997.36 100.00 76 76
U7 snRNA binding
10,441.23 41.75 43 70
methylosome
5,473.72 24.36 38 118
histone pre-mRNA DCP binding
5,534.02 13.33 14 43
mRNA 3'-end processing by stem-loop binding and cleavage
2,278.63 11.75 37 276
U2-type precatalytic spliceosome
1,969.21 10.38 38 328
U1 snRNP binding
1,768.51 7.79 18 173
SMN-Sm protein complex
1,284.09 7.02 38 503
cytoplasmic U snRNP body
2,683.79 5.56 6 38
histone pre-mRNA 3'end processing complex
1,599.75 5.23 8 85
Totals 1040 679085

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2009-08-03 Added SYNONYM snRNP U7
2009-08-03 Added DEFINITION A ribonucleoprotein complex that contains the U7 snRNA and is required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2009-08-03 Deleted DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2009-08-03 Updated TERM U7 snRNP
2008-05-13 Added DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2008-05-12 Deleted DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2008-04-01 Updated RELATION is a GO:0030532 (small nuclear ribonucleoprotein complex)
2006-08-04 Updated DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2003-08-27 Updated DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication dependent histone pre-mRNAs.
Timestamp Action Category Detail
2009-08-03 Updated TERM U7 snRNP
2002-04-17 Updated TERM snRNP U7
2002-02-06 Updated TERM snRNP U7e
2001-04-03 Updated TERM snRNP U7e
2001-03-30 Added TERM snRNP U7e
Timestamp Action Category Detail
2009-08-03 Added SYNONYM snRNP U7
2009-08-03 Added DEFINITION A ribonucleoprotein complex that contains the U7 snRNA and is required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2009-08-03 Deleted DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2008-05-13 Added DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2008-05-12 Deleted DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2006-08-04 Updated DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs.
2003-08-27 Updated DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication dependent histone pre-mRNAs.
2003-08-26 Updated DEFINITION A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication dependent histone pre-mRNAs.
2002-11-27 Added DEFINITION Ribonucleoprotein complex containing small nuclear RNA U7.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0030532 (small nuclear ribonucleoprotein complex)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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