GO:0006383
JSON
transcription by RNA polymerase III
Biological Process
Definition (GO:0006383 GONUTS page)
The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter. PMID:12381659
Secondary IDs
GO:0001009, GO:0001035, GO:0001041
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
transcription from RNA polymerase III promoter | exact |
transcription from a RNA polymerase III hybrid type promoter | narrow |
U2 snRNA transcription (S. cerevisiae) | narrow |
U6 snRNA transcription (mammalian) | narrow |
transcription from RNA polymerase III type 3 promoter | narrow |
transcription from RNA polymerase III type 2 promoter | narrow |
transcription from Pol III promoter | exact |
RNA polymerase III transcription factor activity | related |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006383
Child Term | Relationship to GO:0006383 |
---|---|
regulation of transcription by RNA polymerase III
|
regulates |
tRNA transcription by RNA polymerase III
|
is_a |
RNA polymerase III general transcription initiation factor activity
|
part_of |
transcription elongation by RNA polymerase III
|
part_of |
termination of RNA polymerase III transcription
|
part_of |
negative regulation of transcription by RNA polymerase III
|
negatively_regulates |
transcription initiation at RNA polymerase III promoter
|
part_of |
positive regulation of transcription by RNA polymerase III
|
positively_regulates |
snoRNA transcription by RNA polymerase III
|
is_a |
RNA polymerase III promoter clearance
|
part_of |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to transcription processes | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q96327 | 3702 | EBP1_ARATH | GO:0006351 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15689342 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR007811 | DNA-directed RNA polymerase III subunit RPC4 |
InterPro | IPR007832 | RNA polymerase Rpc34 |
InterPro | IPR017174 | Transcription factor TFIIIB component B'', fungi |
InterPro | IPR024661 | DNA-directed RNA polymerase III, subunit Rpc31 |
InterPro | IPR030701 | Transcription factor TFIIIB component B'' |
InterPro | IPR039340 | Transcription factor Tfc4/TFIIIC-102/Sfc4 |
InterPro | IPR042771 | TFIIIC subunit GTF3C6-like |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0003709 | obsolete RNA polymerase III transcription factor activity | consider GO:0006383 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006383 based on ALL annotations
The top 100 of 1,350 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
transcription by RNA polymerase III
|
538.13 | 100.00 | 362,249 | 362,249 |
RNA polymerase III activity
|
504.52 | 86.20 | 331,301 | 353,372 |
RNA polymerase IV activity
|
531.92 | 86.11 | 315,094 | 318,773 |
transcription by RNA polymerase IV
|
531.92 | 86.11 | 315,094 | 318,773 |
RNA polymerase V activity
|
531.92 | 86.11 | 315,094 | 318,773 |
plastid single subunit type RNA polymerase activity
|
531.92 | 86.11 | 315,094 | 318,773 |
transcription by RNA polymerase V
|
531.92 | 86.11 | 315,094 | 318,773 |
plastid transcription
|
527.81 | 85.53 | 315,094 | 321,255 |
RNA polymerase I activity
|
500.73 | 85.48 | 330,765 | 355,470 |
transcription by RNA polymerase I
|
495.92 | 83.93 | 327,409 | 355,276 |
Totals | 6627725 | 114988081 |
No co-occurrence statistics for GO:0006383 based on MANUAL annotations
The top 100 of 208 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
transcription by RNA polymerase III
|
1,902.50 | 100.00 | 679 | 679 |
RNA polymerase III general transcription initiation factor activity
|
1,704.64 | 31.77 | 224 | 250 |
transcription factor TFIIIC complex
|
984.29 | 30.01 | 283 | 547 |
transcription factor TFIIIB complex
|
1,090.61 | 22.14 | 180 | 314 |
RNA polymerase III type 3 promoter sequence-specific DNA binding
|
986.28 | 21.55 | 183 | 353 |
transcription preinitiation complex
|
548.86 | 15.92 | 178 | 617 |
DNA-templated transcription initiation
|
463.03 | 15.09 | 193 | 793 |
transcription elongation by RNA polymerase I
|
416.58 | 11.22 | 127 | 580 |
RNA polymerase III activity
|
231.86 | 8.43 | 146 | 1,198 |
RNA polymerase I activity
|
205.97 | 7.45 | 131 | 1,210 |
Totals | 3408 | 85674 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_yeast | 163 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2018-02-14 | Deleted | CONSTRAINT | never_in_taxon NCBITaxon:4751 (Fungi) |
2018-02-03 | Added | SECONDARY | GO:0001035 (transcription from RNA polymerase III type 3 promoter) |
2018-02-03 | Added | SYNONYM | transcription from a RNA polymerase III hybrid type promoter |
2018-02-03 | Added | SECONDARY | GO:0001009 (transcription from RNA polymerase III type 2 promoter) |
2018-02-03 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4751 (Fungi) |
2018-02-03 | Added | SECONDARY | GO:0001041 (transcription from a RNA polymerase III hybrid type promoter) |
2018-02-03 | Added | SYNONYM | U6 snRNA transcription (mammalian) |
2018-02-03 | Added | SYNONYM | transcription from RNA polymerase III type 2 promoter |
2018-02-03 | Added | SYNONYM | U2 snRNA transcription (S. cerevisiae) |
2018-02-03 | Added | SYNONYM | transcription from RNA polymerase III type 3 promoter |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-01-20 | Updated | TERM | transcription by RNA polymerase III |
2005-03-27 | Updated | TERM | transcription from RNA polymerase III promoter |
2002-07-16 | Updated | TERM | transcription from Pol III promoter |
2002-02-06 | Updated | TERM | transcription, from Pol III promoter |
2001-10-04 | Updated | TERM | transcription, from Pol III promoter |
2001-04-03 | Updated | TERM | transcription from Pol III promoter |
2001-03-30 | Added | TERM | transcription from Pol III promoter |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-02-03 | Added | SYNONYM | transcription from a RNA polymerase III hybrid type promoter |
2018-02-03 | Added | SYNONYM | U6 snRNA transcription (mammalian) |
2018-02-03 | Added | SYNONYM | transcription from RNA polymerase III type 2 promoter |
2018-02-03 | Added | SYNONYM | U2 snRNA transcription (S. cerevisiae) |
2018-02-03 | Added | SYNONYM | transcription from RNA polymerase III type 3 promoter |
2018-01-20 | Added | SYNONYM | transcription from RNA polymerase III promoter |
2011-11-17 | Added | SYNONYM | RNA polymerase III transcription factor activity |
2011-05-12 | Added | DEFINITION | The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter. |
2011-05-12 | Deleted | DEFINITION | The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter. |
2008-05-13 | Added | DEFINITION | The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter. |
2008-05-12 | Deleted | DEFINITION | The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter. |
2007-08-09 | Added | SYNONYM | transcription from Pol III promoter |
2007-08-09 | Deleted | SYNONYM | transcription from Pol III promoter |
2005-03-27 | Added | SYNONYM | transcription from Pol III promoter |
2005-03-19 | Updated | DEFINITION | The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter. |
2003-07-15 | Added | DEFINITION | The synthesis of RNA from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III-specific promoter. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0006351 (DNA-templated transcription) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-02-14 | Deleted | CONSTRAINT | never_in_taxon NCBITaxon:4751 (Fungi) |
2018-02-03 | Added | SECONDARY | GO:0001035 (transcription from RNA polymerase III type 3 promoter) |
2018-02-03 | Added | SECONDARY | GO:0001009 (transcription from RNA polymerase III type 2 promoter) |
2018-02-03 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4751 (Fungi) |
2018-02-03 | Added | SECONDARY | GO:0001041 (transcription from a RNA polymerase III hybrid type promoter) |
2013-04-18 | Updated | SUBSET | goslim_yeast |
2011-08-14 | Added | SUBSET | goslim_yeast |
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