Note that promoter clearance is represented as a separate step, not part_of either initiation or elongation.
GO:0006384
JSON
transcription initiation at RNA polymerase III promoter
Biological Process
Definition (GO:0006384 GONUTS page)
A transcription initiation process that takes place at a RNA polymerase III gene promoter. Transfer RNAs (tRNA) genes, as well as some other non-coding RNAs, are transcribed by RNA polymerase III.
Comments
Note that promoter clearance is represented as a separate step, not part_of either initiation or elongation.
Secondary IDs
GO:0001022, GO:0001023, GO:0001024, GO:0001036
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
transcription initiation from RNA polymerase III type 3 promoter | narrow |
transcription initiation from RNA polymerase III hybrid type promoter | narrow |
transcription initiation from RNA polymerase III type 2 promoter | narrow |
transcription initiation from RNA polymerase III type 1 promoter | narrow |
transcription initiation from RNA polymerase III promoter | exact |
transcription initiation from Pol III promoter | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006384
Child Term | Relationship to GO:0006384 |
---|---|
transcriptional start site selection at RNA polymerase III promoter
|
part_of |
RNA polymerase III preinitiation complex assembly
|
part_of |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to transcription processes | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q96327 | 3702 | EBP1_ARATH | GO:0006351 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15689342 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR029138 | snRNA-activating protein complex subunit 5 |
InterPro | IPR038846 | DNA-directed RNA polymerase III subunit RPC9 |
InterPro | IPR040454 | Transcription factor IIIC subunit Tfc1/Sfc1 |
InterPro | IPR044210 | Transcription facto Tfc3-like |
InterPro | IPR044230 | General transcription factor 3C polypeptide 4 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006384 based on ALL annotations
The top 100 of 340 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
transcription initiation at RNA polymerase III promoter
|
8,298.80 | 100.00 | 23,490 | 23,490 |
transcription factor TFIIIC complex
|
4,345.97 | 36.33 | 12,746 | 24,339 |
5S class rRNA transcription by RNA polymerase III
|
8,173.03 | 20.68 | 4,874 | 4,949 |
RNA polymerase III type 2 promoter sequence-specific DNA binding
|
7,897.16 | 18.41 | 4,365 | 4,587 |
RNA polymerase III type 1 promoter sequence-specific DNA binding
|
7,861.74 | 18.34 | 4,353 | 4,595 |
RNA polymerase III complex
|
1,308.12 | 12.89 | 9,725 | 61,696 |
termination of RNA polymerase III transcription
|
3,358.78 | 8.03 | 2,139 | 5,285 |
nuclear DNA-directed RNA polymerase complex
|
1,255.16 | 4.89 | 1,584 | 10,473 |
termination of RNA polymerase I transcription
|
1,556.43 | 4.22 | 1,214 | 6,473 |
tRNA transcription by RNA polymerase III
|
594.79 | 4.19 | 2,147 | 29,956 |
Totals | 156313 | 46791590 |
No co-occurrence statistics for GO:0006384 based on MANUAL annotations
The top 94 of 94 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
transcription initiation at RNA polymerase III promoter
|
3,568.51 | 100.00 | 362 | 362 |
5S class rRNA transcription by RNA polymerase III
|
3,328.32 | 26.29 | 97 | 104 |
transcription factor TFIIIC complex
|
658.90 | 12.50 | 101 | 547 |
RNA polymerase III complex
|
444.92 | 11.76 | 244 | 1,957 |
transcription by RNA polymerase III
|
252.27 | 4.83 | 48 | 679 |
termination of RNA polymerase III transcription
|
550.84 | 4.71 | 23 | 149 |
RNA polymerase III general transcription initiation factor activity
|
256.93 | 3.03 | 18 | 250 |
RNA polymerase III cis-regulatory region sequence-specific DNA binding
|
3,568.51 | 2.21 | 8 | 8 |
RNA polymerase III type 2 promoter sequence-specific DNA binding
|
311.81 | 1.97 | 9 | 103 |
tRNA transcription by RNA polymerase III
|
97.23 | 1.86 | 20 | 734 |
Totals | 1308 | 1032699 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-12 | Added | DEFINITION | A transcription initiation process that takes place at a RNA polymerase III gene promoter. Transfer RNAs (tRNA) genes, as well as some other non-coding RNAs, are transcribed by RNA polymerase III. |
2022-06-12 | Updated | TERM | transcription initiation at RNA polymerase III promoter |
2022-06-12 | Deleted | DEFINITION | Any process involved in the assembly of the RNA polymerase III preinitiation complex (PIC) at an RNA polymerase III promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription. |
2022-06-12 | Added | SYNONYM | transcription initiation from RNA polymerase III promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III type 1 promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III type 2 promoter |
2018-02-03 | Added | SECONDARY | GO:0001036 (transcription initiation from RNA polymerase III hybrid type promoter) |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III type 3 promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III hybrid type promoter |
2018-02-03 | Added | SECONDARY | GO:0001024 (transcription initiation from RNA polymerase III type 3 promoter) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-12 | Updated | TERM | transcription initiation at RNA polymerase III promoter |
2005-03-27 | Updated | TERM | transcription initiation from RNA polymerase III promoter |
2002-07-16 | Updated | TERM | transcription initiation from Pol III promoter |
2002-02-06 | Updated | TERM | transcription initiation, from Pol III promoter |
2001-10-04 | Updated | TERM | transcription initiation, from Pol III promoter |
2001-04-03 | Updated | TERM | transcription initiation from Pol III promoter |
2001-03-30 | Added | TERM | transcription initiation from Pol III promoter |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-12 | Added | DEFINITION | A transcription initiation process that takes place at a RNA polymerase III gene promoter. Transfer RNAs (tRNA) genes, as well as some other non-coding RNAs, are transcribed by RNA polymerase III. |
2022-06-12 | Deleted | DEFINITION | Any process involved in the assembly of the RNA polymerase III preinitiation complex (PIC) at an RNA polymerase III promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription. |
2022-06-12 | Added | SYNONYM | transcription initiation from RNA polymerase III promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III type 1 promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III type 2 promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III type 3 promoter |
2018-02-03 | Added | SYNONYM | transcription initiation from RNA polymerase III hybrid type promoter |
2010-12-03 | Deleted | DEFINITION | A transcription initiation process that results in RNA synthesis by RNA polymerase III. |
2010-12-03 | Added | DEFINITION | Any process involved in the assembly of the RNA polymerase III preinitiation complex (PIC) at an RNA polymerase III promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription. |
2009-10-30 | Added | DEFINITION | A transcription initiation process that results in RNA synthesis by RNA polymerase III. |
2007-08-09 | Added | SYNONYM | transcription initiation from Pol III promoter |
2007-08-09 | Deleted | SYNONYM | transcription initiation from Pol III promoter |
2005-03-27 | Added | SYNONYM | transcription initiation from Pol III promoter |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | part of GO:0006383 (transcription by RNA polymerase III) |
2008-04-01 | Updated | RELATION | is a GO:0006352 (DNA-templated transcription initiation) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-02-03 | Added | SECONDARY | GO:0001036 (transcription initiation from RNA polymerase III hybrid type promoter) |
2018-02-03 | Added | SECONDARY | GO:0001024 (transcription initiation from RNA polymerase III type 3 promoter) |
2018-02-03 | Added | SECONDARY | GO:0001023 (transcription initiation from RNA polymerase III type 2 promoter) |
2018-02-03 | Added | SECONDARY | GO:0001022 (transcription initiation from RNA polymerase III type 1 promoter) |
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