This term is obsolete.

GO:0006744 JSON

ubiquinone biosynthetic process

Biological Process

Definition (GO:0006744 GONUTS page)

The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.

341,879 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
ubiquinone synthesis exact
ubiquinone biosynthesis exact
ubiquinone anabolism exact
coenzyme Q9 biosynthetic process narrow
coenzyme Q9 biosynthesis narrow
coenzyme Q8 biosynthetic process narrow
coenzyme Q8 biosynthesis narrow
coenzyme Q6 biosynthetic process narrow
coenzyme Q6 biosynthesis narrow
coenzyme Q10 biosynthetic process narrow

Ancestor Chart

Ancestor chart for GO:0006744
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006744

Child Term Relationship to
GO:0006744
3-demethylubiquinol-n 3-O-methyltransferase activity
part_of
ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate
is_a
ubiquinone biosynthetic process via 2-polyprenylphenol
is_a
ubiquinone biosynthetic process from chorismate
is_a
ubiquinone biosynthetic process from tyrosine
is_a
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
part_of
ubiquinone biosynthesis complex
capable_of_part_of
ubiquinone-6 biosynthetic process
is_a
regulation of ubiquinone biosynthetic process
regulates
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
part_of

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein P97478 10090 COQ7_MOUSE GO:0006744 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19478076
NOT-qualified manual protein Q63619 10116 COQ7_RAT GO:0006744 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q76FS5 3702 SPS2_ARATH GO:0006744 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:23913686
NOT-qualified manual protein Q8S948 3702 SPS1_ARATH GO:0006744 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:23913686

Cross-references

Database ID Description
InterPro IPR000689 Ubiquinone biosynthesis monooxygenase COQ6
InterPro IPR007440 Chorismate--pyruvate lyase
InterPro IPR007715 Ubiquinone biosynthesis protein Coq4
InterPro IPR010232 Probable protein kinase UbiB
InterPro IPR010233 Ubiquinone biosynthesis O-methyltransferase
InterPro IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6
InterPro IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase
InterPro IPR011566 Ubiquinone biosynthesis protein Coq7
InterPro IPR012762 Ubiquinone biosynthesis protein COQ9
InterPro IPR016830 Ubiquinone biosynthesis accessory factor UbiT

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_output CHEBI CHEBI:16389 ubiquinones

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0006744 based on ALL annotations
The top 100 of 1,076 co-occurring terms
Co-occurring Term PR S% #Together #Compared
ubiquinone biosynthetic process
926.11 100.00 210,491 210,491
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
925.76 11.06 23,287 23,296
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
926.11 9.55 20,102 20,102
3-demethylubiquinol-n 3-O-methyltransferase activity
925.69 9.26 19,483 19,492
4-hydroxybenzoate polyprenyltransferase activity
921.11 8.74 18,416 18,516
3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
912.21 8.25 17,388 17,653
extrinsic component of mitochondrial inner membrane
918.59 7.24 15,259 15,384
demethylmenaquinone methyltransferase activity
423.61 6.68 15,275 33,395
3-demethoxyubiquinol 3-hydroxylase activity
920.37 6.01 12,658 12,737
prenyltransferase activity
92.75 5.80 25,506 254,687
Totals 1071234 219369040
No co-occurrence statistics for GO:0006744 based on MANUAL annotations
The top 100 of 233 co-occurring terms
Co-occurring Term PR S% #Together #Compared
ubiquinone biosynthetic process
925.36 100.00 1,396 1,396
polyprenyl diphosphate synthase complex
925.36 11.03 154 154
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
925.36 9.46 132 132
prenyltransferase activity
257.30 9.09 166 597
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
774.16 9.01 128 153
isoprenoid biosynthetic process
246.04 8.66 159 598
3-demethoxyubiquinol 3-hydroxylase activity
925.36 7.45 104 104
4-hydroxybenzoate polyprenyltransferase activity
925.36 7.38 103 103
protein-containing complex binding
93.76 6.79 238 2,349
carotene biosynthetic process
589.99 6.55 95 149
Totals 4756 152712

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_pombe 61
goslim_drosophila 173

Change Log

Timestamp Action Category Detail
2022-01-12 Added SUBSET goslim_drosophila
2020-05-08 Added SUBSET goslim_pombe
2020-02-28 Deleted XREF MIPS_funcat:01.20.15.03
2019-05-04 Added XREF MIPS_funcat:01.20.15.03
2013-10-17 Deleted RELATION is a GO:0045426 (quinone cofactor biosynthetic process)
2012-11-22 Added RELATION is a GO:1901663 (quinone biosynthetic process)
2012-11-22 Deleted RELATION is a GO:0042181 (ketone biosynthetic process)
2012-11-02 Added RELATION is a GO:0042181 (ketone biosynthetic process)
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
Timestamp Action Category Detail
2007-01-15 Updated TERM ubiquinone biosynthetic process
2002-02-06 Updated TERM ubiquinone biosynthesis
2001-04-03 Updated TERM ubiquinone biosynthesis
2001-03-30 Added TERM ubiquinone biosynthesis
Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
2007-08-09 Added SYNONYM ubiquinone biosynthesis
2007-08-09 Added SYNONYM ubiquinone anabolism
2007-08-09 Deleted SYNONYM coenzyme Q biosynthetic process
2007-08-09 Deleted SYNONYM coenzyme Q10 biosynthetic process
2007-08-09 Deleted SYNONYM coenzyme Q6 biosynthetic process
2007-08-09 Deleted SYNONYM coenzyme Q8 biosynthetic process
2007-08-09 Deleted SYNONYM coenzyme Q9 biosynthetic process
2007-08-09 Deleted SYNONYM ubiquinone biosynthesis
2007-08-09 Deleted SYNONYM coenzyme Q9 biosynthesis
2007-08-09 Deleted SYNONYM ubiquinone anabolism
2007-08-09 Deleted SYNONYM ubiquinone formation
2007-08-09 Deleted SYNONYM ubiquinone synthesis
2007-08-09 Deleted SYNONYM coenzyme Q biosynthesis
2007-08-09 Deleted SYNONYM coenzyme Q10 biosynthesis
2007-08-09 Deleted SYNONYM coenzyme Q6 biosynthesis
2007-08-09 Added SYNONYM coenzyme Q9 biosynthesis
2007-08-09 Added SYNONYM ubiquinone formation
2007-08-09 Added SYNONYM ubiquinone synthesis
2007-08-09 Deleted SYNONYM coenzyme Q8 biosynthesis
2007-08-09 Added SYNONYM coenzyme Q8 biosynthetic process
2007-08-09 Added SYNONYM coenzyme Q8 biosynthesis
2007-08-09 Added SYNONYM coenzyme Q6 biosynthetic process
2007-08-09 Added SYNONYM coenzyme Q9 biosynthetic process
2007-08-09 Added SYNONYM coenzyme Q6 biosynthesis
2007-08-09 Added SYNONYM coenzyme Q10 biosynthetic process
2007-08-09 Added SYNONYM coenzyme Q10 biosynthesis
2007-08-09 Added SYNONYM coenzyme Q biosynthetic process
2007-08-09 Added SYNONYM coenzyme Q biosynthesis
2007-01-15 Added SYNONYM ubiquinone biosynthesis
2007-01-15 Added SYNONYM coenzyme Q10 biosynthetic process
2007-01-15 Added SYNONYM coenzyme Q6 biosynthetic process
2007-01-15 Added SYNONYM coenzyme Q biosynthetic process
2007-01-15 Added SYNONYM coenzyme Q9 biosynthetic process
2007-01-15 Added SYNONYM coenzyme Q8 biosynthetic process
2006-09-03 Added SYNONYM coenzyme Q10 biosynthesis
2006-09-03 Added SYNONYM coenzyme Q8 biosynthesis
2006-09-03 Added SYNONYM coenzyme Q9 biosynthesis
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
2005-10-02 Added SYNONYM coenzyme Q6 biosynthesis
2005-10-02 Added SYNONYM coenzyme Q biosynthesis
2005-08-10 Added SYNONYM ubiquinone synthesis
2005-08-10 Added SYNONYM ubiquinone formation
2005-08-10 Added SYNONYM ubiquinone anabolism
2004-04-28 Added DEFINITION The formation from simpler components of ubiquinone, a lipid-soluble electron-transporting coenzyme.
Timestamp Action Category Detail
2013-10-17 Deleted RELATION is a GO:0045426 (quinone cofactor biosynthetic process)
2012-11-22 Added RELATION is a GO:1901663 (quinone biosynthetic process)
2012-11-22 Deleted RELATION is a GO:0042181 (ketone biosynthetic process)
2012-11-02 Added RELATION is a GO:0042181 (ketone biosynthetic process)
2008-04-01 Updated RELATION is a GO:0006743 (ubiquinone metabolic process)
2008-04-01 Updated RELATION is a GO:0045426 (quinone cofactor biosynthetic process)
Timestamp Action Category Detail
2020-02-28 Deleted XREF MIPS_funcat:01.20.15.03
2019-05-04 Added XREF MIPS_funcat:01.20.15.03
2003-10-27 Added XREF MetaCyc:UBISYN-PWY
Timestamp Action Category Detail
2022-01-12 Added SUBSET goslim_drosophila
2020-05-08 Added SUBSET goslim_pombe
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