GO:0006744
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ubiquinone biosynthetic process
Biological Process
Definition (GO:0006744 GONUTS page)
The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
ubiquinone synthesis | exact |
ubiquinone biosynthesis | exact |
ubiquinone anabolism | exact |
coenzyme Q9 biosynthetic process | narrow |
coenzyme Q9 biosynthesis | narrow |
coenzyme Q8 biosynthetic process | narrow |
coenzyme Q8 biosynthesis | narrow |
coenzyme Q6 biosynthetic process | narrow |
coenzyme Q6 biosynthesis | narrow |
coenzyme Q10 biosynthetic process | narrow |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006744
Child Term | Relationship to GO:0006744 |
---|---|
3-demethylubiquinol-n 3-O-methyltransferase activity
|
part_of |
ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate
|
is_a |
ubiquinone biosynthetic process via 2-polyprenylphenol
|
is_a |
ubiquinone biosynthetic process from chorismate
|
is_a |
ubiquinone biosynthetic process from tyrosine
|
is_a |
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
|
part_of |
ubiquinone biosynthesis complex
|
capable_of_part_of |
ubiquinone-6 biosynthetic process
|
is_a |
regulation of ubiquinone biosynthetic process
|
regulates |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
|
part_of |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P97478 | 10090 | COQ7_MOUSE | GO:0006744 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:19478076 | |
NOT-qualified manual | protein | Q63619 | 10116 | COQ7_RAT | GO:0006744 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q76FS5 | 3702 | SPS2_ARATH | GO:0006744 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:23913686 | |
NOT-qualified manual | protein | Q8S948 | 3702 | SPS1_ARATH | GO:0006744 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:23913686 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR000689 | Ubiquinone biosynthesis monooxygenase COQ6 |
InterPro | IPR007440 | Chorismate--pyruvate lyase |
InterPro | IPR007715 | Ubiquinone biosynthesis protein Coq4 |
InterPro | IPR010232 | Probable protein kinase UbiB |
InterPro | IPR010233 | Ubiquinone biosynthesis O-methyltransferase |
InterPro | IPR010971 | Ubiquinone biosynthesis hydroxylase UbiH/COQ6 |
InterPro | IPR011295 | 2-polyprenyl-6-methoxyphenol 4-hydroxylase |
InterPro | IPR011566 | Ubiquinone biosynthesis protein Coq7 |
InterPro | IPR012762 | Ubiquinone biosynthesis protein COQ9 |
InterPro | IPR016830 | Ubiquinone biosynthesis accessory factor UbiT |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_output | CHEBI | CHEBI:16389 | ubiquinones |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006744 based on ALL annotations
The top 100 of 1,076 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
ubiquinone biosynthetic process
|
926.11 | 100.00 | 210,491 | 210,491 |
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
|
925.76 | 11.06 | 23,287 | 23,296 |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
|
926.11 | 9.55 | 20,102 | 20,102 |
3-demethylubiquinol-n 3-O-methyltransferase activity
|
925.69 | 9.26 | 19,483 | 19,492 |
4-hydroxybenzoate polyprenyltransferase activity
|
921.11 | 8.74 | 18,416 | 18,516 |
3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
|
912.21 | 8.25 | 17,388 | 17,653 |
extrinsic component of mitochondrial inner membrane
|
918.59 | 7.24 | 15,259 | 15,384 |
demethylmenaquinone methyltransferase activity
|
423.61 | 6.68 | 15,275 | 33,395 |
3-demethoxyubiquinol 3-hydroxylase activity
|
920.37 | 6.01 | 12,658 | 12,737 |
prenyltransferase activity
|
92.75 | 5.80 | 25,506 | 254,687 |
Totals | 1071234 | 219369040 |
No co-occurrence statistics for GO:0006744 based on MANUAL annotations
The top 100 of 233 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
ubiquinone biosynthetic process
|
925.36 | 100.00 | 1,396 | 1,396 |
polyprenyl diphosphate synthase complex
|
925.36 | 11.03 | 154 | 154 |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
|
925.36 | 9.46 | 132 | 132 |
prenyltransferase activity
|
257.30 | 9.09 | 166 | 597 |
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity
|
774.16 | 9.01 | 128 | 153 |
isoprenoid biosynthetic process
|
246.04 | 8.66 | 159 | 598 |
3-demethoxyubiquinol 3-hydroxylase activity
|
925.36 | 7.45 | 104 | 104 |
4-hydroxybenzoate polyprenyltransferase activity
|
925.36 | 7.38 | 103 | 103 |
protein-containing complex binding
|
93.76 | 6.79 | 238 | 2,349 |
carotene biosynthetic process
|
589.99 | 6.55 | 95 | 149 |
Totals | 4756 | 152712 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_pombe | 61 |
goslim_drosophila | 173 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
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Timestamp | Action | Category | Detail |
---|---|---|---|
2022-01-12 | Added | SUBSET | goslim_drosophila |
2020-05-08 | Added | SUBSET | goslim_pombe |
2020-02-28 | Deleted | XREF | MIPS_funcat:01.20.15.03 |
2019-05-04 | Added | XREF | MIPS_funcat:01.20.15.03 |
2013-10-17 | Deleted | RELATION | is a GO:0045426 (quinone cofactor biosynthetic process) |
2012-11-22 | Added | RELATION | is a GO:1901663 (quinone biosynthetic process) |
2012-11-22 | Deleted | RELATION | is a GO:0042181 (ketone biosynthetic process) |
2012-11-02 | Added | RELATION | is a GO:0042181 (ketone biosynthetic process) |
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-01-15 | Updated | TERM | ubiquinone biosynthetic process |
2002-02-06 | Updated | TERM | ubiquinone biosynthesis |
2001-04-03 | Updated | TERM | ubiquinone biosynthesis |
2001-03-30 | Added | TERM | ubiquinone biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
2007-08-09 | Added | SYNONYM | ubiquinone biosynthesis |
2007-08-09 | Added | SYNONYM | ubiquinone anabolism |
2007-08-09 | Deleted | SYNONYM | coenzyme Q biosynthetic process |
2007-08-09 | Deleted | SYNONYM | coenzyme Q10 biosynthetic process |
2007-08-09 | Deleted | SYNONYM | coenzyme Q6 biosynthetic process |
2007-08-09 | Deleted | SYNONYM | coenzyme Q8 biosynthetic process |
2007-08-09 | Deleted | SYNONYM | coenzyme Q9 biosynthetic process |
2007-08-09 | Deleted | SYNONYM | ubiquinone biosynthesis |
2007-08-09 | Deleted | SYNONYM | coenzyme Q9 biosynthesis |
2007-08-09 | Deleted | SYNONYM | ubiquinone anabolism |
2007-08-09 | Deleted | SYNONYM | ubiquinone formation |
2007-08-09 | Deleted | SYNONYM | ubiquinone synthesis |
2007-08-09 | Deleted | SYNONYM | coenzyme Q biosynthesis |
2007-08-09 | Deleted | SYNONYM | coenzyme Q10 biosynthesis |
2007-08-09 | Deleted | SYNONYM | coenzyme Q6 biosynthesis |
2007-08-09 | Added | SYNONYM | coenzyme Q9 biosynthesis |
2007-08-09 | Added | SYNONYM | ubiquinone formation |
2007-08-09 | Added | SYNONYM | ubiquinone synthesis |
2007-08-09 | Deleted | SYNONYM | coenzyme Q8 biosynthesis |
2007-08-09 | Added | SYNONYM | coenzyme Q8 biosynthetic process |
2007-08-09 | Added | SYNONYM | coenzyme Q8 biosynthesis |
2007-08-09 | Added | SYNONYM | coenzyme Q6 biosynthetic process |
2007-08-09 | Added | SYNONYM | coenzyme Q9 biosynthetic process |
2007-08-09 | Added | SYNONYM | coenzyme Q6 biosynthesis |
2007-08-09 | Added | SYNONYM | coenzyme Q10 biosynthetic process |
2007-08-09 | Added | SYNONYM | coenzyme Q10 biosynthesis |
2007-08-09 | Added | SYNONYM | coenzyme Q biosynthetic process |
2007-08-09 | Added | SYNONYM | coenzyme Q biosynthesis |
2007-01-15 | Added | SYNONYM | ubiquinone biosynthesis |
2007-01-15 | Added | SYNONYM | coenzyme Q10 biosynthetic process |
2007-01-15 | Added | SYNONYM | coenzyme Q6 biosynthetic process |
2007-01-15 | Added | SYNONYM | coenzyme Q biosynthetic process |
2007-01-15 | Added | SYNONYM | coenzyme Q9 biosynthetic process |
2007-01-15 | Added | SYNONYM | coenzyme Q8 biosynthetic process |
2006-09-03 | Added | SYNONYM | coenzyme Q10 biosynthesis |
2006-09-03 | Added | SYNONYM | coenzyme Q8 biosynthesis |
2006-09-03 | Added | SYNONYM | coenzyme Q9 biosynthesis |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
2005-10-02 | Added | SYNONYM | coenzyme Q6 biosynthesis |
2005-10-02 | Added | SYNONYM | coenzyme Q biosynthesis |
2005-08-10 | Added | SYNONYM | ubiquinone synthesis |
2005-08-10 | Added | SYNONYM | ubiquinone formation |
2005-08-10 | Added | SYNONYM | ubiquinone anabolism |
2004-04-28 | Added | DEFINITION | The formation from simpler components of ubiquinone, a lipid-soluble electron-transporting coenzyme. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-10-17 | Deleted | RELATION | is a GO:0045426 (quinone cofactor biosynthetic process) |
2012-11-22 | Added | RELATION | is a GO:1901663 (quinone biosynthetic process) |
2012-11-22 | Deleted | RELATION | is a GO:0042181 (ketone biosynthetic process) |
2012-11-02 | Added | RELATION | is a GO:0042181 (ketone biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0006743 (ubiquinone metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0045426 (quinone cofactor biosynthetic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-02-28 | Deleted | XREF | MIPS_funcat:01.20.15.03 |
2019-05-04 | Added | XREF | MIPS_funcat:01.20.15.03 |
2003-10-27 | Added | XREF | MetaCyc:UBISYN-PWY |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-01-12 | Added | SUBSET | goslim_drosophila |
2020-05-08 | Added | SUBSET | goslim_pombe |
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