This term is obsolete.

GO:0006888 JSON

endoplasmic reticulum to Golgi vesicle-mediated transport

Biological Process

Definition (GO:0006888 GONUTS page)

The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.

Secondary IDs

GO:0048221

274,561 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
ER to Golgi vesicle-mediated transport exact
anterograde vesicle-mediated transport, ER to Golgi exact
anterograde transport, ER to Golgi exact
rough endoplasmic reticulum to cis-Golgi transport exact
rough ER to cis-Golgi transport exact
rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport exact
rough ER to cis-Golgi vesicle-mediated transport exact
anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi exact
endoplasmic reticulum to Golgi transport exact
anterograde transport, endoplasmic reticulum to Golgi exact

Ancestor Chart

Ancestor chart for GO:0006888
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0006888

Child Term Relationship to
GO:0006888
COPII vesicle uncoating
part_of
regulation of ER to Golgi vesicle-mediated transport
regulates
COPII-coated vesicle budding
part_of
endoplasmic reticulum-derived vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane
part_of
endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with Golgi cis cisterna membrane
part_of
vesicle targeting, rough ER to cis-Golgi
part_of
positive regulation of ER to Golgi vesicle-mediated transport
positively_regulates

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport Only in Taxon 131567 cellular organisms

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A0G2JZY7 10116 A0A0G2JZY7_RAT GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F1LQ09 10116 F1LQ09_RAT GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein O14653 9606 GOSR2_HUMAN GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9349823
NOT-qualified manual protein O14966 9606 RAB7L_HUMAN GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:24788816
NOT-qualified manual protein O35165 10116 GOSR2_RAT GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P05712 10116 RAB2A_RAT GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P61019 9606 RAB2A_HUMAN GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17684057
NOT-qualified manual protein Q0ZHH6 10116 ATLA3_RAT GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q562A0 10116 Q562A0_RAT GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q5I940 10090 Q5I940_MOUSE GO:0006888 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:16354670

Cross-references

Database ID Description
InterPro IPR005578 Yif1 family
InterPro IPR006722 Trafficking protein particle complex subunit 2
InterPro IPR006895 Zinc finger, Sec23/Sec24-type
InterPro IPR006896 Sec23/Sec24, trunk domain
InterPro IPR006900 Sec23/Sec24, helical domain
InterPro IPR007277 Svp26/Tex261
InterPro IPR007528 RINT-1/Tip20
InterPro IPR016391 Coatomer subunit alpha
InterPro IPR016710 Emp46/Emp47
InterPro IPR023601 Golgi SNAP receptor complex, subunit 1

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0006888 based on ALL annotations
The top 100 of 2,371 co-occurring terms
Co-occurring Term PR S% #Together #Compared
endoplasmic reticulum to Golgi vesicle-mediated transport
876.33 100.00 222,450 222,450
endoplasmic reticulum exit site
729.00 17.33 39,951 48,025
vesicle-mediated transport
166.74 15.84 108,090 568,096
COPII vesicle coat
741.37 15.31 35,042 41,421
retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
372.64 14.83 41,255 97,019
COPII-coated vesicle cargo loading
854.27 14.66 32,734 33,579
COPI vesicle coat
688.57 14.56 33,737 42,936
COPII-coated ER to Golgi transport vesicle
693.08 14.07 32,511 41,107
Golgi membrane
130.35 12.64 101,722 683,853
COPI-coated vesicle membrane
643.28 11.82 27,481 37,437
Totals 1957369 99447230
No co-occurrence statistics for GO:0006888 based on MANUAL annotations
The top 100 of 1,126 co-occurring terms
Co-occurring Term PR S% #Together #Compared
endoplasmic reticulum to Golgi vesicle-mediated transport
208.15 100.00 6,206 6,206
COPII-coated ER to Golgi transport vesicle
165.41 22.99 1,517 1,909
endoplasmic reticulum-Golgi intermediate compartment
156.38 22.14 1,483 1,974
COPI vesicle coat
163.87 15.43 999 1,269
intra-Golgi vesicle-mediated transport
89.26 13.53 1,024 2,388
intracellular protein transport
39.69 12.67 1,702 8,925
retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
75.85 12.67 1,009 2,769
Golgi organization
69.80 12.20 999 2,979
TRAPP complex
193.25 11.18 700 754
Golgi membrane
33.96 10.33 1,363 8,354
Totals 32215 534695

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2021-09-14 Deleted SYNONYM endoplasmic reticulum to Golgi vesicle-mediated transport
2020-02-28 Deleted XREF MIPS_funcat:20.09.07.03
2019-05-04 Added XREF MIPS_funcat:20.09.07.03
2018-10-28 Added SYNONYM ER to Golgi vesicle-mediated transport
2018-10-28 Updated TERM endoplasmic reticulum to Golgi vesicle-mediated transport
2016-06-22 Added RELATION is a GO:0046907 (intracellular transport)
2016-03-27 Deleted RELATION is a GO:0016482 (cytosolic transport)
2015-04-24 Added RELATION occurs in GO:0005737 (cytoplasm)
2015-01-12 Added SYNONYM anterograde (ER to Golgi) transport
Timestamp Action Category Detail
2018-10-28 Updated TERM endoplasmic reticulum to Golgi vesicle-mediated transport
2006-01-20 Updated TERM ER to Golgi vesicle-mediated transport
2002-02-06 Updated TERM ER to Golgi transport
2001-04-03 Updated TERM ER to Golgi transport
2001-03-30 Added TERM ER to Golgi transport
Timestamp Action Category Detail
2021-09-14 Deleted SYNONYM endoplasmic reticulum to Golgi vesicle-mediated transport
2018-10-28 Added SYNONYM ER to Golgi vesicle-mediated transport
2015-01-12 Added SYNONYM anterograde (ER to Golgi) transport
2015-01-12 Added SYNONYM anterograde vesicle-mediated transport, endoplasmic reticulum to Golgi
2015-01-12 Added SYNONYM anterograde transport, endoplasmic reticulum to Golgi
2015-01-12 Added SYNONYM anterograde vesicle-mediated transport, ER to Golgi
2015-01-12 Added SYNONYM anterograde transport, ER to Golgi
2009-12-19 Added SYNONYM rough ER to cis-Golgi transport
2009-12-19 Added SYNONYM rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport
2009-12-19 Added SYNONYM rough ER to cis-Golgi vesicle-mediated transport
2009-12-19 Added SYNONYM rough endoplasmic reticulum to cis-Golgi transport
2008-05-13 Added DEFINITION The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
2008-05-12 Deleted DEFINITION The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
2007-08-09 Added SYNONYM ER to Golgi transport
2007-08-09 Added SYNONYM endoplasmic reticulum to Golgi vesicle-mediated transport
2007-08-09 Deleted SYNONYM endoplasmic reticulum to Golgi vesicle-mediated transport
2007-08-09 Deleted SYNONYM endoplasmic reticulum to Golgi transport
2007-08-09 Deleted SYNONYM ER to Golgi transport
2007-08-09 Added SYNONYM endoplasmic reticulum to Golgi transport
2006-01-20 Added SYNONYM endoplasmic reticulum to Golgi vesicle-mediated transport
2006-01-20 Added SYNONYM ER to Golgi transport
2004-11-09 Added SYNONYM endoplasmic reticulum to Golgi transport
2004-03-24 Updated DEFINITION The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
2003-04-04 Updated DEFINITION The directed movement of substances from the ER to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
2002-11-27 Added DEFINITION The directed movement of proteins from the ER to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
Timestamp Action Category Detail
2016-06-22 Added RELATION is a GO:0046907 (intracellular transport)
2016-03-27 Deleted RELATION is a GO:0016482 (cytosolic transport)
2015-04-24 Added RELATION occurs in GO:0005737 (cytoplasm)
2013-02-02 Added RELATION is a GO:0016482 (cytosolic transport)
2008-04-30 Deleted RELATION part of GO:0045045 (obsolete secretory pathway)
2008-04-01 Updated RELATION is a GO:0048193 (Golgi vesicle transport)
2008-04-01 Updated RELATION part of GO:0045045 (obsolete secretory pathway)
Timestamp Action Category Detail
2020-02-28 Deleted XREF MIPS_funcat:20.09.07.03
2019-05-04 Added XREF MIPS_funcat:20.09.07.03
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:131567 (cellular organisms)
2009-12-19 Added SECONDARY GO:0048221 (rough ER to cis-Golgi vesicle-mediated transport)
Please Wait...

Not found :(

Sorry, but the Term you were trying to view does not exist.

Reported error:

It looks like this may have been caused by:

  • a mistyped URL
  • an out-of-date link
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice and Terms of Use.