Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
GO:0006996
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organelle organization
Biological Process
Definition (GO:0006996 GONUTS page)
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
Restrictions
This term should not be used for direct annotation.
See comment below for further information.
Comments
Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Secondary IDs
GO:1902589
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
organelle organization and biogenesis | related |
single-organism organelle organization | related |
single organism organelle organization | exact |
organelle organisation | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0006996
Child Term | Relationship to GO:0006996 |
---|---|
phagosome maturation
|
is_a |
Golgi organization
|
is_a |
peroxisome organization
|
is_a |
glycosome organization
|
is_a |
positive regulation of organelle organization
|
positively_regulates |
spectrosome organization
|
is_a |
organelle assembly
|
is_a |
chromosome organization
|
is_a |
cilium organization
|
is_a |
bacterial-type flagellum organization
|
is_a |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR022170 | E3 Ubiquitin ligase MUL1-like |
InterPro | IPR027523 | CLU domain containing protein |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0006996 based on ALL annotations
The top 100 of 182 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
organelle organization
|
14,995,290.00 | 100.00 | 13 | 13 |
regulation of JUN kinase activity
|
14,995,291.00 | 7.69 | 1 | 1 |
positive regulation of glutamate neurotransmitter secretion in response to membrane depolarization
|
1,874,411.40 | 5.00 | 1 | 8 |
acrosomal lumen
|
833,071.75 | 3.33 | 1 | 18 |
negative regulation of mitotic centrosome separation
|
394,612.94 | 2.00 | 1 | 38 |
positive regulation of synaptic vesicle endocytosis
|
171,701.80 | 1.10 | 3 | 262 |
regulation of dopamine uptake involved in synaptic transmission
|
149,454.72 | 0.96 | 3 | 301 |
establishment of protein localization to plasma membrane
|
142,360.36 | 0.92 | 3 | 316 |
regulation of dopamine receptor signaling pathway
|
85,200.52 | 0.53 | 1 | 176 |
negative regulation of dendritic spine morphogenesis
|
81,055.63 | 0.51 | 1 | 185 |
Totals | 182 | 1604799 |
No co-occurrence statistics for GO:0006996 based on MANUAL annotations
The top 100 of 134 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
organelle organization
|
99,369.16 | 100.00 | 13 | 13 |
ATP-dependent protein folding chaperone
|
37,263.43 | 16.67 | 3 | 8 |
regulation of dopamine uptake involved in synaptic transmission
|
18,631.72 | 11.54 | 3 | 16 |
regulation of JUN kinase activity
|
99,369.16 | 7.69 | 1 | 1 |
establishment of protein localization to plasma membrane
|
10,279.57 | 7.69 | 3 | 29 |
negative regulation of mitotic centrosome separation
|
24,842.29 | 6.25 | 1 | 4 |
positive regulation of synaptic vesicle endocytosis
|
6,624.61 | 5.45 | 3 | 45 |
distal axon
|
11,041.02 | 4.76 | 1 | 9 |
organelle assembly
|
4,416.41 | 3.57 | 2 | 45 |
synaptic vesicle membrane organization
|
3,680.34 | 3.08 | 2 | 54 |
Totals | 178 | 73813 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_candida | 86 |
goslim_pir | 439 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-04-17 | Added | SUBSET | gocheck_do_not_annotate |
2022-04-08 | Deleted | SUBSET | goslim_aspergillus |
2017-08-13 | Added | SYNONYM | single organism organelle organization |
2017-08-13 | Added | SYNONYM | single-organism organelle organization |
2017-08-13 | Added | SECONDARY | GO:1902589 (single-organism organelle organization) |
2015-06-25 | Deleted | RELATION | is a GO:0009987 (cellular process) |
2013-12-21 | Deleted | RELATION | is a GO:0044763 (single-organism cellular process) |
2013-12-21 | Added | RELATION | is a GO:0009987 (cellular process) |
2013-04-18 | Updated | SUBSET | goslim_aspergillus |
2013-04-18 | Updated | SUBSET | goslim_candida |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-10-02 | Updated | TERM | organelle organization |
2002-02-06 | Updated | TERM | organelle organization and biogenesis |
2001-04-03 | Updated | TERM | organelle organization and biogenesis |
2001-03-30 | Added | TERM | organelle organization and biogenesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2017-08-13 | Added | SYNONYM | single organism organelle organization |
2017-08-13 | Added | SYNONYM | single-organism organelle organization |
2009-10-07 | Added | SYNONYM | organelle organization and biogenesis |
2009-10-07 | Deleted | SYNONYM | organelle organization and biogenesis |
2009-06-16 | Added | DEFINITION | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. |
2009-06-16 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. |
2009-06-16 | Deleted | SYNONYM | organelle organisation and biogenesis |
2009-06-16 | Added | SYNONYM | organelle organisation |
2008-10-02 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell. |
2008-10-02 | Added | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. |
2008-10-02 | Added | SYNONYM | organelle organization and biogenesis |
2008-05-13 | Added | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell. |
2008-05-12 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell. |
2007-08-09 | Added | SYNONYM | organelle organisation and biogenesis |
2007-08-09 | Deleted | SYNONYM | organelle organisation and biogenesis |
2007-04-27 | Updated | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell. |
2005-07-22 | Added | SYNONYM | organelle organisation and biogenesis |
2004-03-03 | Updated | DEFINITION | The assembly and arrangement of any organelle within a cell. |
2002-11-27 | Added | DEFINITION | Assembly and maintenance of any organelle within a cell. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-06-25 | Deleted | RELATION | is a GO:0009987 (cellular process) |
2013-12-21 | Deleted | RELATION | is a GO:0044763 (single-organism cellular process) |
2013-12-21 | Added | RELATION | is a GO:0009987 (cellular process) |
2012-12-23 | Added | RELATION | is a GO:0044763 (single-organism cellular process) |
2012-11-17 | Deleted | RELATION | is a GO:0071842 (cellular component organization at cellular level) |
2012-11-17 | Added | RELATION | is a GO:0016043 (cellular component organization) |
2010-09-12 | Added | RELATION | is a GO:0071842 (cellular component organization at cellular level) |
2010-09-12 | Deleted | RELATION | is a GO:0016043 (cellular component organization) |
2010-09-12 | Deleted | RELATION | is a GO:0009987 (cellular process) |
2009-06-29 | Added | RELATION | is a GO:0009987 (cellular process) |
2008-04-01 | Updated | RELATION | is a GO:0016043 (cellular component organization) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-04-17 | Added | SUBSET | gocheck_do_not_annotate |
2022-04-08 | Deleted | SUBSET | goslim_aspergillus |
2017-08-13 | Added | SECONDARY | GO:1902589 (single-organism organelle organization) |
2013-04-18 | Updated | SUBSET | goslim_aspergillus |
2013-04-18 | Updated | SUBSET | goslim_candida |
2013-04-18 | Updated | SUBSET | goslim_pir |
2011-11-05 | Added | SUBSET | goslim_aspergillus |
2010-12-05 | Deleted | SUBSET | goslim_generic |
2009-10-07 | Deleted | SUBSET | goslim_pombe |
2009-09-06 | Deleted | SUBSET | goslim_yeast |
2009-06-20 | Added | SUBSET | goslim_pombe |
2008-06-09 | Added | SUBSET | goslim_yeast |
2008-06-09 | Added | SUBSET | goslim_generic |
2008-06-09 | Added | SUBSET | goslim_candida |
2008-06-09 | Added | SUBSET | goslim_pir |
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