GO:0007015
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actin filament organization
Biological Process
Definition (GO:0007015 GONUTS page)
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
actin filament organisation | exact |
regulation of actin filament localization | narrow |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0007015
Child Term | Relationship to GO:0007015 |
---|---|
actomyosin contractile ring assembly actin filament organization
|
is_a |
muscle thin filament assembly
|
is_a |
cardiac muscle thin filament assembly
|
is_a |
actin filament network formation
|
is_a |
actin filament bundle organization
|
is_a |
actin crosslink formation
|
is_a |
actin polymerization or depolymerization
|
is_a |
regulation of actin filament organization
|
regulates |
female germline ring canal formation, actin assembly
|
is_a |
actin filament branching
|
is_a |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5ZQ30 | 10116 | A0A8I5ZQ30_RAT | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6A771 | 10116 | A0A8I6A771_RAT | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6AHW7 | 10116 | A0A8I6AHW7_RAT | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JJB0 | 10116 | A6JJB0_RAT | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JJB1 | 10116 | A6JJB1_RAT | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | M0RC57 | 10116 | M0RC57_RAT | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P31232 | 10116 | TAGL_RAT | GO:0007010 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P37804 | 10090 | TAGL_MOUSE | GO:0007010 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:11158319 | |
NOT-qualified manual | protein | Q91VZ6 | 10090 | SMAP1_MOUSE | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15659652 | |
NOT-qualified manual | protein | Q9C8E6 | 3702 | PMI1_ARATH | GO:0030036 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:16113226 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR001152 | Beta-thymosin |
InterPro | IPR010431 | Fascin |
InterPro | IPR011026 | Actin nucleation-promoting factor WAS, C-terminal |
InterPro | IPR025604 | Actin cytoskeleton-regulatory complex protein End3 |
InterPro | IPR029982 | Kaptin |
InterPro | IPR032074 | Actin cross-linking domain |
InterPro | IPR033378 | Protein BRICK1 |
InterPro | IPR037429 | Rvs161/Hob3, BAR domain |
InterPro | IPR037454 | PACSIN1, F-BAR |
InterPro | IPR037975 | Class XI myosin, cargo binding domain |
Replaces
This term can be used instead of these obsolete terms:
GO Identifier | GO Term Name | Reason |
---|---|---|
GO:0030037 | obsolete actin filament reorganization involved in cell cycle | replaced_by GO:0007015 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0007015 based on ALL annotations
The top 100 of 3,938 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
actin filament organization
|
1,160.71 | 100.00 | 167,948 | 167,948 |
actin cytoskeleton
|
465.74 | 28.98 | 85,781 | 213,783 |
microfilament motor activity
|
701.76 | 27.39 | 56,047 | 92,701 |
actin filament binding
|
332.21 | 24.74 | 108,489 | 379,052 |
myosin complex
|
502.69 | 23.50 | 57,008 | 131,631 |
actin binding
|
224.84 | 17.49 | 108,018 | 557,639 |
cytoskeletal motor activity
|
183.67 | 12.09 | 56,912 | 359,662 |
actin filament-based movement
|
940.36 | 11.33 | 19,541 | 24,120 |
microvillus
|
625.80 | 9.33 | 17,027 | 31,581 |
endocytosis
|
138.97 | 7.73 | 30,098 | 251,377 |
Totals | 1172592 | 9242166 |
No co-occurrence statistics for GO:0007015 based on MANUAL annotations
The top 100 of 2,890 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
actin filament organization
|
321.18 | 100.00 | 4,022 | 4,022 |
microfilament motor activity
|
220.45 | 23.68 | 1,068 | 1,556 |
actin cytoskeleton
|
100.81 | 19.84 | 1,409 | 4,489 |
actin filament binding
|
77.50 | 19.04 | 1,907 | 7,903 |
regulation of actin cytoskeleton organization
|
138.18 | 14.94 | 749 | 1,741 |
protein kinase binding
|
70.68 | 13.47 | 1,036 | 4,708 |
cortical cytoskeleton organization
|
267.48 | 12.67 | 523 | 628 |
establishment or maintenance of cell polarity
|
173.52 | 12.39 | 557 | 1,031 |
regulation of cell shape
|
98.68 | 10.90 | 581 | 1,891 |
cytoskeleton
|
68.45 | 10.82 | 725 | 3,402 |
Totals | 30049 | 583858 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
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- Cross-references
- Cross-references
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Timestamp | Action | Category | Detail |
---|---|---|---|
2016-12-23 | Added | RELATION | is a GO:0097435 (supramolecular fiber organization) |
2016-12-23 | Deleted | RELATION | is a GO:0016043 (cellular component organization) |
2016-06-22 | Deleted | RELATION | is a GO:0071822 (protein complex subunit organization) |
2016-06-22 | Added | RELATION | is a GO:0016043 (cellular component organization) |
2013-01-25 | Added | RELATION | is a GO:0071822 (protein complex subunit organization) |
2013-01-25 | Deleted | RELATION | is a GO:0030036 (actin cytoskeleton organization) |
2013-01-25 | Added | RELATION | part of GO:0030036 (actin cytoskeleton organization) |
2009-06-16 | Added | DEFINITION | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2009-06-16 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2008-11-09 | Deleted | DEFINITION | Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2002-02-06 | Updated | TERM | actin filament organization |
2001-04-03 | Updated | TERM | actin filament organization |
2001-03-30 | Added | TERM | actin filament organization |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-06-16 | Added | DEFINITION | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2009-06-16 | Deleted | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2008-11-09 | Deleted | DEFINITION | Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2008-11-09 | Added | DEFINITION | A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2008-05-13 | Added | DEFINITION | Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2008-05-12 | Deleted | DEFINITION | Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2007-08-09 | Deleted | SYNONYM | regulation of actin filament localization |
2007-08-09 | Added | SYNONYM | regulation of actin filament localization |
2007-08-09 | Added | SYNONYM | actin filament organisation |
2007-08-09 | Deleted | SYNONYM | actin filament organisation |
2005-07-22 | Added | SYNONYM | actin filament organisation |
2004-04-19 | Added | SYNONYM | regulation of actin filament localization |
2004-04-16 | Deleted | SYNONYM | regulation of actin filament localization |
2003-10-29 | Added | SYNONYM | regulation of actin filament localization |
2002-11-27 | Updated | DEFINITION | Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking. |
2001-08-06 | Added | DEFINITION | Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by crosslinking. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2016-12-23 | Added | RELATION | is a GO:0097435 (supramolecular fiber organization) |
2016-12-23 | Deleted | RELATION | is a GO:0016043 (cellular component organization) |
2016-06-22 | Deleted | RELATION | is a GO:0071822 (protein complex subunit organization) |
2016-06-22 | Added | RELATION | is a GO:0016043 (cellular component organization) |
2013-01-25 | Added | RELATION | is a GO:0071822 (protein complex subunit organization) |
2013-01-25 | Deleted | RELATION | is a GO:0030036 (actin cytoskeleton organization) |
2013-01-25 | Added | RELATION | part of GO:0030036 (actin cytoskeleton organization) |
2008-04-01 | Updated | RELATION | is a GO:0030036 (actin cytoskeleton organization) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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