This term is obsolete.

GO:0007015 JSON

actin filament organization

Biological Process

Definition (GO:0007015 GONUTS page)

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.

388,179 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
actin filament organisation exact
regulation of actin filament localization narrow

Ancestor Chart

Ancestor chart for GO:0007015
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0007015

Child Term Relationship to
GO:0007015
actomyosin contractile ring assembly actin filament organization
is_a
muscle thin filament assembly
is_a
cardiac muscle thin filament assembly
is_a
actin filament network formation
is_a
actin filament bundle organization
is_a
actin crosslink formation
is_a
actin polymerization or depolymerization
is_a
regulation of actin filament organization
regulates
female germline ring canal formation, actin assembly
is_a
actin filament branching
is_a

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A8I5ZQ30 10116 A0A8I5ZQ30_RAT GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6A771 10116 A0A8I6A771_RAT GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AHW7 10116 A0A8I6AHW7_RAT GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JJB0 10116 A6JJB0_RAT GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JJB1 10116 A6JJB1_RAT GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein M0RC57 10116 M0RC57_RAT GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P31232 10116 TAGL_RAT GO:0007010 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P37804 10090 TAGL_MOUSE GO:0007010 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:11158319
NOT-qualified manual protein Q91VZ6 10090 SMAP1_MOUSE GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15659652
NOT-qualified manual protein Q9C8E6 3702 PMI1_ARATH GO:0030036 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:16113226

Cross-references

Database ID Description
InterPro IPR001152 Beta-thymosin
InterPro IPR010431 Fascin
InterPro IPR011026 Actin nucleation-promoting factor WAS, C-terminal
InterPro IPR025604 Actin cytoskeleton-regulatory complex protein End3
InterPro IPR029982 Kaptin
InterPro IPR032074 Actin cross-linking domain
InterPro IPR033378 Protein BRICK1
InterPro IPR037429 Rvs161/Hob3, BAR domain
InterPro IPR037454 PACSIN1, F-BAR
InterPro IPR037975 Class XI myosin, cargo binding domain

Replaces

This term can be used instead of these obsolete terms:

GO Identifier GO Term Name Reason
GO:0030037 obsolete actin filament reorganization involved in cell cycle replaced_by GO:0007015

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0007015 based on ALL annotations
The top 100 of 3,938 co-occurring terms
Co-occurring Term PR S% #Together #Compared
actin filament organization
1,160.71 100.00 167,948 167,948
actin cytoskeleton
465.74 28.98 85,781 213,783
microfilament motor activity
701.76 27.39 56,047 92,701
actin filament binding
332.21 24.74 108,489 379,052
myosin complex
502.69 23.50 57,008 131,631
actin binding
224.84 17.49 108,018 557,639
cytoskeletal motor activity
183.67 12.09 56,912 359,662
actin filament-based movement
940.36 11.33 19,541 24,120
microvillus
625.80 9.33 17,027 31,581
endocytosis
138.97 7.73 30,098 251,377
Totals 1172592 9242166
No co-occurrence statistics for GO:0007015 based on MANUAL annotations
The top 100 of 2,890 co-occurring terms
Co-occurring Term PR S% #Together #Compared
actin filament organization
321.18 100.00 4,022 4,022
microfilament motor activity
220.45 23.68 1,068 1,556
actin cytoskeleton
100.81 19.84 1,409 4,489
actin filament binding
77.50 19.04 1,907 7,903
regulation of actin cytoskeleton organization
138.18 14.94 749 1,741
protein kinase binding
70.68 13.47 1,036 4,708
cortical cytoskeleton organization
267.48 12.67 523 628
establishment or maintenance of cell polarity
173.52 12.39 557 1,031
regulation of cell shape
98.68 10.90 581 1,891
cytoskeleton
68.45 10.82 725 3,402
Totals 30049 583858

Change Log

Timestamp Action Category Detail
2016-12-23 Added RELATION is a GO:0097435 (supramolecular fiber organization)
2016-12-23 Deleted RELATION is a GO:0016043 (cellular component organization)
2016-06-22 Deleted RELATION is a GO:0071822 (protein complex subunit organization)
2016-06-22 Added RELATION is a GO:0016043 (cellular component organization)
2013-01-25 Added RELATION is a GO:0071822 (protein complex subunit organization)
2013-01-25 Deleted RELATION is a GO:0030036 (actin cytoskeleton organization)
2013-01-25 Added RELATION part of GO:0030036 (actin cytoskeleton organization)
2009-06-16 Added DEFINITION A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2009-06-16 Deleted DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2008-11-09 Deleted DEFINITION Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
Timestamp Action Category Detail
2002-02-06 Updated TERM actin filament organization
2001-04-03 Updated TERM actin filament organization
2001-03-30 Added TERM actin filament organization
Timestamp Action Category Detail
2009-06-16 Added DEFINITION A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2009-06-16 Deleted DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2008-11-09 Deleted DEFINITION Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2008-11-09 Added DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2008-05-13 Added DEFINITION Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2008-05-12 Deleted DEFINITION Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2007-08-09 Deleted SYNONYM regulation of actin filament localization
2007-08-09 Added SYNONYM regulation of actin filament localization
2007-08-09 Added SYNONYM actin filament organisation
2007-08-09 Deleted SYNONYM actin filament organisation
2005-07-22 Added SYNONYM actin filament organisation
2004-04-19 Added SYNONYM regulation of actin filament localization
2004-04-16 Deleted SYNONYM regulation of actin filament localization
2003-10-29 Added SYNONYM regulation of actin filament localization
2002-11-27 Updated DEFINITION Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.
2001-08-06 Added DEFINITION Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by crosslinking.
Timestamp Action Category Detail
2016-12-23 Added RELATION is a GO:0097435 (supramolecular fiber organization)
2016-12-23 Deleted RELATION is a GO:0016043 (cellular component organization)
2016-06-22 Deleted RELATION is a GO:0071822 (protein complex subunit organization)
2016-06-22 Added RELATION is a GO:0016043 (cellular component organization)
2013-01-25 Added RELATION is a GO:0071822 (protein complex subunit organization)
2013-01-25 Deleted RELATION is a GO:0030036 (actin cytoskeleton organization)
2013-01-25 Added RELATION part of GO:0030036 (actin cytoskeleton organization)
2008-04-01 Updated RELATION is a GO:0030036 (actin cytoskeleton organization)
Timestamp Action Category Detail
Timestamp Action Category Detail
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