This term is obsolete.

GO:0009016 JSON

succinyldiaminopimelate transaminase activity

Molecular Function

Definition (GO:0009016 GONUTS page)

Catalysis of the reaction: 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate.

8,682 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
N-succinyl-L-diaminopimelic glutamic transaminase activity related
succinyldiaminopimelate aminotransferase activity exact
succinyldiaminopimelate transferase activity related
N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity related

Ancestor Chart

Ancestor chart for GO:0009016
Chart options
Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Annotating to catalytic activities using the IPI evidence code Link
Describing enzyme functions that catalyse multi-stage reactions Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
IEA Review protein Q9VNA3 7227 Q9VNA3_DROME GO:0016740 Requested by Helen Attrill. https://github.com/geneontology/go-annotation/issues/3377PMID:28597544: 'SDF2 and SDF2L1 associate with ERdj3 and act as components in the BiP chaperone cycle to prevent the aggregation of misfolded proteins.'They are not enzymes and are ER resident proteins, not membrane or extracellular proteins. IPR016093|IPR036300
NOT-qualified manual protein P02521 9031 ARLY1_CHICK GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q0E8K5 7227 Q0E8K5_DROME GO:0016740 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593
NOT-qualified manual protein Q7JY99 7227 Q7JY99_DROME GO:0016740 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593
NOT-qualified manual protein Q7KGG1 7227 Q7KGG1_DROME GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370
NOT-qualified manual protein Q7KV84 7227 Q7KV84_DROME GO:0016740 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593
NOT-qualified manual protein Q7SIE0 9103 ARLY1_MELGA GO:0003824 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884
NOT-qualified manual protein Q7YTX2 7227 Q7YTX2_DROME GO:0016740 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593
NOT-qualified manual protein Q8I939 7227 Q8I939_DROME GO:0016740 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593
NOT-qualified manual protein Q8I940 7227 Q8I940_DROME GO:0016740 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593

Cross-references

Database ID Description
EC 2.6.1.17
InterPro IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria
KEGG_REACTION R04475
MetaCyc SUCCINYLDIAMINOPIMTRANS-RXN
RHEA 11960

Cross-Ontology Relations

Relation Other Ontology ID Term
has_participant CHEBI CHEBI:58087 N-(3-carboxylatopropionyl)-LL-2,6-diaminopimelate(2-)
has_participant CHEBI CHEBI:16810 2-oxoglutarate(2-)
has_participant CHEBI CHEBI:15685 L-2-succinylamino-6-oxoheptanedioate(3-)
has_participant CHEBI CHEBI:29985 L-glutamate(1-)

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0009016 based on ALL annotations
The top 70 of 70 co-occurring terms
Co-occurring Term PR S% #Together #Compared
succinyldiaminopimelate transaminase activity
22,458.39 100.00 8,680 8,680
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
1,689.76 6.24 2,324 30,888
lysine biosynthetic process via diaminopimelate
408.74 1.81 6,819 374,673
arginine metabolic process
405.24 1.71 2,231 123,643
L,L-diaminopimelate aminotransferase activity
648.20 1.37 221 7,657
kynurenine-oxoglutarate transaminase activity
286.34 0.98 347 27,216
transaminase activity
161.30 0.72 8,676 1,208,015
arginine catabolic process
175.54 0.68 453 57,957
lysine biosynthetic process
139.32 0.61 2,034 327,889
L-arginine biosynthetic process
123.81 0.54 2,231 404,701
Totals 49264 222917794
No co-occurrence statistics for GO:0009016 based on MANUAL annotations
The top 6 of 6 co-occurring terms
Co-occurring Term PR S% #Together #Compared
succinyldiaminopimelate transaminase activity
1,291,799.00 100.00 1 1
lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate
645,899.50 50.00 1 2
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
143,533.22 11.11 1 9
arginine biosynthetic process via ornithine
4,263.36 0.33 1 303
pyridoxal phosphate binding
583.73 0.05 1 2,213
identical protein binding
147.13 0.01 1 8,780
Totals 6 11308

Change Log

Timestamp Action Category Detail
2020-10-08 Added SYNONYM N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity
2020-10-08 Added SYNONYM succinyldiaminopimelate transferase activity
2020-10-08 Added SYNONYM N-succinyl-L-diaminopimelic glutamic transaminase activity
2020-10-08 Deleted SYNONYM N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity
2020-10-08 Deleted SYNONYM N-succinyl-L-diaminopimelic glutamic transaminase activity
2020-10-08 Deleted SYNONYM succinyldiaminopimelate transferase activity
2019-06-20 Deleted XREF KEGG:R04475
2019-06-20 Added XREF KEGG_REACTION:R04475
2018-07-13 Deleted XREF RHEA:11963
2018-07-13 Added XREF RHEA:11960
Timestamp Action Category Detail
2003-09-09 Updated TERM succinyldiaminopimelate transaminase activity
2003-03-19 Updated TERM succinyldiaminopimelate aminotransferase activity
2002-02-06 Updated TERM succinyldiaminopimelate aminotransferase
2001-04-03 Updated TERM succinyldiaminopimelate aminotransferase
2001-03-30 Added TERM succinyldiaminopimelate aminotransferase
Timestamp Action Category Detail
2020-10-08 Added SYNONYM N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity
2020-10-08 Added SYNONYM succinyldiaminopimelate transferase activity
2020-10-08 Added SYNONYM N-succinyl-L-diaminopimelic glutamic transaminase activity
2020-10-08 Deleted SYNONYM N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity
2020-10-08 Deleted SYNONYM N-succinyl-L-diaminopimelic glutamic transaminase activity
2020-10-08 Deleted SYNONYM succinyldiaminopimelate transferase activity
2010-10-11 Added DEFINITION Catalysis of the reaction: 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate.
2010-10-11 Deleted DEFINITION Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate.
2008-05-13 Added DEFINITION Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate.
2008-05-12 Deleted DEFINITION Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate.
2007-11-08 Added SYNONYM N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity
2007-11-08 Added SYNONYM N-succinyl-L-diaminopimelic glutamic transaminase activity
2007-09-06 Added SYNONYM succinyldiaminopimelate transferase activity
2007-08-09 Deleted SYNONYM succinyldiaminopimelate aminotransferase activity
2007-08-09 Added SYNONYM succinyldiaminopimelate aminotransferase activity
2004-04-19 Added SYNONYM succinyldiaminopimelate aminotransferase activity
2004-04-16 Deleted SYNONYM succinyldiaminopimelate aminotransferase activity
2003-10-27 Added SYNONYM succinyldiaminopimelate aminotransferase activity
2002-11-27 Added DEFINITION Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0008483 (transaminase activity)
Timestamp Action Category Detail
2019-06-20 Deleted XREF KEGG:R04475
2019-06-20 Added XREF KEGG_REACTION:R04475
2018-07-13 Deleted XREF RHEA:11963
2018-07-13 Added XREF RHEA:11960
2010-10-11 Added XREF KEGG:R04475
2010-10-11 Added XREF RHEA:11963
2003-10-27 Added XREF MetaCyc:SUCCINYLDIAMINOPIMTRANS-RXN
2001-03-30 Added XREF EC:2.6.1.17
Timestamp Action Category Detail
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