GO:0009016
JSON
succinyldiaminopimelate transaminase activity
Molecular Function
Definition (GO:0009016 GONUTS page)
Catalysis of the reaction: 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
N-succinyl-L-diaminopimelic glutamic transaminase activity | related |
succinyldiaminopimelate aminotransferase activity | exact |
succinyldiaminopimelate transferase activity | related |
N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity | related |
Ancestor Chart
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to catalytic activities using the IPI evidence code | Link |
Describing enzyme functions that catalyse multi-stage reactions | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
IEA Review | protein | Q9VNA3 | 7227 | Q9VNA3_DROME | GO:0016740 | Requested by Helen Attrill. https://github.com/geneontology/go-annotation/issues/3377PMID:28597544: 'SDF2 and SDF2L1 associate with ERdj3 and act as components in the BiP chaperone cycle to prevent the aggregation of misfolded proteins.'They are not enzymes and are ER resident proteins, not membrane or extracellular proteins. | IPR016093|IPR036300 |
NOT-qualified manual | protein | P02521 | 9031 | ARLY1_CHICK | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884 | |
NOT-qualified manual | protein | Q0E8K5 | 7227 | Q0E8K5_DROME | GO:0016740 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593 | |
NOT-qualified manual | protein | Q7JY99 | 7227 | Q7JY99_DROME | GO:0016740 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593 | |
NOT-qualified manual | protein | Q7KGG1 | 7227 | Q7KGG1_DROME | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:11904370 | |
NOT-qualified manual | protein | Q7KV84 | 7227 | Q7KV84_DROME | GO:0016740 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593 | |
NOT-qualified manual | protein | Q7SIE0 | 9103 | ARLY1_MELGA | GO:0003824 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000304 from this reference: PMID:11258884 | |
NOT-qualified manual | protein | Q7YTX2 | 7227 | Q7YTX2_DROME | GO:0016740 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593 | |
NOT-qualified manual | protein | Q8I939 | 7227 | Q8I939_DROME | GO:0016740 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593 | |
NOT-qualified manual | protein | Q8I940 | 7227 | Q8I940_DROME | GO:0016740 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000320 from this reference: PMID:16545593 |
Cross-references
Database | ID | Description |
---|---|---|
EC | 2.6.1.17 | |
InterPro | IPR019878 | Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria |
KEGG_REACTION | R04475 | |
MetaCyc | SUCCINYLDIAMINOPIMTRANS-RXN | |
RHEA | 11960 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_participant | CHEBI | CHEBI:58087 | N-(3-carboxylatopropionyl)-LL-2,6-diaminopimelate(2-) |
has_participant | CHEBI | CHEBI:16810 | 2-oxoglutarate(2-) |
has_participant | CHEBI | CHEBI:15685 | L-2-succinylamino-6-oxoheptanedioate(3-) |
has_participant | CHEBI | CHEBI:29985 | L-glutamate(1-) |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0009016 based on ALL annotations
The top 70 of 70 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
succinyldiaminopimelate transaminase activity
|
22,458.39 | 100.00 | 8,680 | 8,680 |
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
|
1,689.76 | 6.24 | 2,324 | 30,888 |
lysine biosynthetic process via diaminopimelate
|
408.74 | 1.81 | 6,819 | 374,673 |
arginine metabolic process
|
405.24 | 1.71 | 2,231 | 123,643 |
L,L-diaminopimelate aminotransferase activity
|
648.20 | 1.37 | 221 | 7,657 |
kynurenine-oxoglutarate transaminase activity
|
286.34 | 0.98 | 347 | 27,216 |
transaminase activity
|
161.30 | 0.72 | 8,676 | 1,208,015 |
arginine catabolic process
|
175.54 | 0.68 | 453 | 57,957 |
lysine biosynthetic process
|
139.32 | 0.61 | 2,034 | 327,889 |
L-arginine biosynthetic process
|
123.81 | 0.54 | 2,231 | 404,701 |
Totals | 49264 | 222917794 |
No co-occurrence statistics for GO:0009016 based on MANUAL annotations
The top 6 of 6 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
succinyldiaminopimelate transaminase activity
|
1,291,799.00 | 100.00 | 1 | 1 |
lysine biosynthetic process via diaminopimelate and N-succinyl-2-amino-6-ketopimelate
|
645,899.50 | 50.00 | 1 | 2 |
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
|
143,533.22 | 11.11 | 1 | 9 |
arginine biosynthetic process via ornithine
|
4,263.36 | 0.33 | 1 | 303 |
pyridoxal phosphate binding
|
583.73 | 0.05 | 1 | 2,213 |
identical protein binding
|
147.13 | 0.01 | 1 | 8,780 |
Totals | 6 | 11308 |
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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Timestamp | Action | Category | Detail |
---|---|---|---|
2020-10-08 | Added | SYNONYM | N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity |
2020-10-08 | Added | SYNONYM | succinyldiaminopimelate transferase activity |
2020-10-08 | Added | SYNONYM | N-succinyl-L-diaminopimelic glutamic transaminase activity |
2020-10-08 | Deleted | SYNONYM | N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity |
2020-10-08 | Deleted | SYNONYM | N-succinyl-L-diaminopimelic glutamic transaminase activity |
2020-10-08 | Deleted | SYNONYM | succinyldiaminopimelate transferase activity |
2019-06-20 | Deleted | XREF | KEGG:R04475 |
2019-06-20 | Added | XREF | KEGG_REACTION:R04475 |
2018-07-13 | Deleted | XREF | RHEA:11963 |
2018-07-13 | Added | XREF | RHEA:11960 |
Timestamp | Action | Category | Detail |
---|---|---|---|
2003-09-09 | Updated | TERM | succinyldiaminopimelate transaminase activity |
2003-03-19 | Updated | TERM | succinyldiaminopimelate aminotransferase activity |
2002-02-06 | Updated | TERM | succinyldiaminopimelate aminotransferase |
2001-04-03 | Updated | TERM | succinyldiaminopimelate aminotransferase |
2001-03-30 | Added | TERM | succinyldiaminopimelate aminotransferase |
Timestamp | Action | Category | Detail |
---|---|---|---|
2020-10-08 | Added | SYNONYM | N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity |
2020-10-08 | Added | SYNONYM | succinyldiaminopimelate transferase activity |
2020-10-08 | Added | SYNONYM | N-succinyl-L-diaminopimelic glutamic transaminase activity |
2020-10-08 | Deleted | SYNONYM | N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity |
2020-10-08 | Deleted | SYNONYM | N-succinyl-L-diaminopimelic glutamic transaminase activity |
2020-10-08 | Deleted | SYNONYM | succinyldiaminopimelate transferase activity |
2010-10-11 | Added | DEFINITION | Catalysis of the reaction: 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate. |
2010-10-11 | Deleted | DEFINITION | Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate. |
2008-05-13 | Added | DEFINITION | Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate. |
2008-05-12 | Deleted | DEFINITION | Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate. |
2007-11-08 | Added | SYNONYM | N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity |
2007-11-08 | Added | SYNONYM | N-succinyl-L-diaminopimelic glutamic transaminase activity |
2007-09-06 | Added | SYNONYM | succinyldiaminopimelate transferase activity |
2007-08-09 | Deleted | SYNONYM | succinyldiaminopimelate aminotransferase activity |
2007-08-09 | Added | SYNONYM | succinyldiaminopimelate aminotransferase activity |
2004-04-19 | Added | SYNONYM | succinyldiaminopimelate aminotransferase activity |
2004-04-16 | Deleted | SYNONYM | succinyldiaminopimelate aminotransferase activity |
2003-10-27 | Added | SYNONYM | succinyldiaminopimelate aminotransferase activity |
2002-11-27 | Added | DEFINITION | Catalysis of the reaction: N-succinyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-succinyl-L-2-amino-6-oxoheptanedioate + L-glutamate. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0008483 (transaminase activity) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-06-20 | Deleted | XREF | KEGG:R04475 |
2019-06-20 | Added | XREF | KEGG_REACTION:R04475 |
2018-07-13 | Deleted | XREF | RHEA:11963 |
2018-07-13 | Added | XREF | RHEA:11960 |
2010-10-11 | Added | XREF | KEGG:R04475 |
2010-10-11 | Added | XREF | RHEA:11963 |
2003-10-27 | Added | XREF | MetaCyc:SUCCINYLDIAMINOPIMTRANS-RXN |
2001-03-30 | Added | XREF | EC:2.6.1.17 |
Timestamp | Action | Category | Detail |
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