This term is obsolete.

GO:0009271 JSON

phage shock

Biological Process

Definition (GO:0009271 GONUTS page)

A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage. PMID:15485810 PMID:16045608

7,718 annotations

Ancestor Chart

Ancestor chart for GO:0009271
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Ancestor chart

GO Discussions

The GO editorial group is intending to improve the information provided in this area of the GO. If you would like to be involved in discussions regarding this development activity, please email the GO Consortium. Please note that it is still appropriate to use this term for curation or analysis purpose:

Ontology Development Project
Viral Processes Link

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0009271 phage shock Only in Taxon 2 Bacteria

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein Q9SST3 3702 Q9SST3_ARATH GO:0009615 1 NOT-qualified manual annotation exists with evidence code ECO:0000270 from this reference: PMID:14666423

Cross-references

Database ID Description
InterPro IPR009554 Phage shock protein B

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0009271 based on ALL annotations
The top 21 of 21 co-occurring terms
Co-occurring Term PR S% #Together #Compared
phage shock
25,260.96 100.00 7,717 7,717
cytosol
8.40 0.03 4,566 13,724,995
regulation of DNA-templated transcription
8.40 0.03 3,150 9,472,174
regulation of cellular response to stress
45.72 0.02 2 1,105
cell pole
161.93 0.01 1 156
protein binding
3.62 0.01 6 41,817
membrane
1.46 0.01 2,949 51,131,591
molecular_function
0.72 0.00 2 69,707
cellular_component
0.40 0.00 1 62,739
biological_process
0.38 0.00 1 66,439
Totals 18450 158507184
No co-occurrence statistics for GO:0009271 based on MANUAL annotations
The top 12 of 12 co-occurring terms
Co-occurring Term PR S% #Together #Compared
phage shock
184,542.70 100.00 7 7
cell pole
4,501.04 2.13 1 41
regulation of cellular response to stress
4,100.95 1.96 1 45
cytoplasmic side of plasma membrane
140.87 0.08 1 1,310
phospholipid binding
86.76 0.05 1 2,127
response to heat
69.90 0.04 1 2,640
transcription regulator complex
53.71 0.03 1 3,436
identical protein binding
21.02 0.01 1 8,780
cytosol
10.96 0.01 5 84,217
protein binding
8.83 0.00 2 41,817
Totals 24 297988

Change Log

Timestamp Action Category Detail
2024-09-05 Deleted CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2019-09-29 Added CONSTRAINT in_taxon NCBITaxon:2 (Bacteria)
2019-09-23 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2015-06-25 Deleted RELATION is a GO:0009615 (response to virus)
2014-06-05 Added RELATION is a GO:0009615 (response to virus)
2014-02-17 Deleted RELATION is a GO:0009615 (response to virus)
2014-01-29 Added RELATION is a GO:0098586 (cellular response to virus)
2008-05-13 Added DEFINITION A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
2008-05-12 Deleted DEFINITION A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
2008-04-01 Updated RELATION is a GO:0009615 (response to virus)
Timestamp Action Category Detail
2002-02-06 Updated TERM phage shock
2001-04-03 Updated TERM phage shock
2001-03-30 Added TERM phage shock
Timestamp Action Category Detail
2008-05-13 Added DEFINITION A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
2008-05-12 Deleted DEFINITION A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
2006-09-19 Updated DEFINITION A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
2005-02-18 Updated DEFINITION A response by bacterial cells to phage infection that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage.
2005-02-17 Added DEFINITION A response by bacterial cells to phage infection that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage
Timestamp Action Category Detail
2015-06-25 Deleted RELATION is a GO:0009615 (response to virus)
2014-06-05 Added RELATION is a GO:0009615 (response to virus)
2014-02-17 Deleted RELATION is a GO:0009615 (response to virus)
2014-01-29 Added RELATION is a GO:0098586 (cellular response to virus)
2008-04-01 Updated RELATION is a GO:0009615 (response to virus)
2008-04-01 Updated RELATION is a GO:0006950 (response to stress)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Deleted CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2019-09-29 Added CONSTRAINT in_taxon NCBITaxon:2 (Bacteria)
2019-09-23 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
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