This term is obsolete.

GO:0009658 JSON

chloroplast organization

Biological Process

Definition (GO:0009658 GONUTS page)

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

32,308 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
chloroplast organization and biogenesis related
chloroplast organisation exact

Ancestor Chart

Ancestor chart for GO:0009658
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0009658

Child Term Relationship to
GO:0009658
chloroplast fission
is_a
chloroplast elongation
is_a
chloroplast relocation
is_a
chloroplast proton-transporting ATP synthase complex assembly
part_of
granum assembly
part_of
plastoglobule organization
part_of
chloroplast disassembly
is_a

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0009658 chloroplast organization Never in Taxon 28009 Choanoflagellata
GO:0009658 chloroplast organization Never in Taxon 33208 Metazoa
GO:0009658 chloroplast organization Never in Taxon 4751 Fungi
GO:0009658 chloroplast organization Never in Taxon 554915 Amoebozoa

More information on taxon constraints in GO is available here

Cross-references

Database ID Description
InterPro IPR034563 Protein PALE CRESS
InterPro IPR044190 Protein THYLAKOID ASSEMBLY 8-like
InterPro IPR044645 Pentatricopeptide repeat-containing protein DG1/EMB2279-like
InterPro IPR044701 Thioredoxin-like fold domain-containing protein MRL7/MRL7L

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0009658 based on ALL annotations
The top 100 of 662 co-occurring terms
Co-occurring Term PR S% #Together #Compared
chloroplast organization
14,528.16 100.00 13,418 13,418
thylakoid membrane organization
3,504.32 9.82 1,907 7,906
chloroplast rRNA processing
3,103.29 8.81 1,749 8,188
protein import into chloroplast stroma
3,168.24 8.12 1,537 7,048
plastid outer membrane
3,161.72 8.07 1,526 7,012
chloroplast outer membrane
1,926.13 6.79 1,640 12,370
embryo development ending in seed dormancy
2,222.74 6.52 1,369 8,948
chloroplast nucleoid
3,363.63 5.70 943 4,073
chloroplast mRNA processing
11,199.96 4.41 599 777
plastid-encoded plastid RNA polymerase complex
4,022.64 3.82 569 2,055
Totals 50034 3557635
No co-occurrence statistics for GO:0009658 based on MANUAL annotations
The top 100 of 369 co-occurring terms
Co-occurring Term PR S% #Together #Compared
chloroplast organization
1,135.15 100.00 1,138 1,138
thylakoid membrane organization
404.59 13.89 211 592
chloroplast rRNA processing
350.97 11.45 175 566
plastid transcription
706.57 10.07 122 196
protein import into chloroplast stroma
238.48 7.77 125 595
chloroplast nucleoid
348.65 6.46 86 280
chloroplast
71.86 5.94 561 8,862
embryo development ending in seed dormancy
199.03 5.81 91 519
nucleologenesis
957.78 4.70 54 64
plastid-encoded plastid RNA polymerase complex
1,069.66 4.29 49 52
Totals 4075 100234

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:28009 (Choanoflagellata)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
2020-02-28 Deleted XREF MIPS_funcat:42.26.03
2019-05-04 Added XREF MIPS_funcat:42.26.03
2009-06-16 Added DEFINITION A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
2009-06-16 Deleted SYNONYM chloroplast organisation and biogenesis
2009-06-16 Added SYNONYM chloroplast organization and biogenesis
2009-06-16 Added SYNONYM chloroplast organisation
Timestamp Action Category Detail
2008-10-21 Updated TERM chloroplast organization
2002-02-06 Updated TERM chloroplast organization and biogenesis
2001-04-03 Updated TERM chloroplast organization and biogenesis
2001-03-30 Added TERM chloroplast organization and biogenesis
Timestamp Action Category Detail
2009-06-16 Added DEFINITION A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
2009-06-16 Deleted SYNONYM chloroplast organisation and biogenesis
2009-06-16 Added SYNONYM chloroplast organization and biogenesis
2009-06-16 Added SYNONYM chloroplast organisation
2009-06-16 Deleted SYNONYM chloroplast organization and biogenesis
2009-06-16 Deleted DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the chloroplast.
2008-10-21 Added SYNONYM chloroplast organization and biogenesis
2008-05-13 Added DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the chloroplast.
2008-05-12 Deleted DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the chloroplast.
2007-08-09 Deleted SYNONYM chloroplast organisation and biogenesis
2007-08-09 Added SYNONYM chloroplast organisation and biogenesis
2007-04-27 Updated DEFINITION A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the chloroplast.
2005-07-22 Added SYNONYM chloroplast organisation and biogenesis
2004-03-03 Added DEFINITION The assembly and arrangement of the chloroplast.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0009657 (plastid organization)
Timestamp Action Category Detail
2020-02-28 Deleted XREF MIPS_funcat:42.26.03
2019-05-04 Added XREF MIPS_funcat:42.26.03
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4751 (Fungi)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:33208 (Metazoa)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:28009 (Choanoflagellata)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:554915 (Amoebozoa)
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