GO:0009684
JSON
indoleacetic acid biosynthetic process
Biological Process
Definition (GO:0009684 GONUTS page)
The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
indoleacetic acid synthesis | exact |
indoleacetic acid anabolism | exact |
indoleacetic acid biosynthesis | exact |
indoleacetic acid formation | exact |
indole-acetic acid biosynthetic process | related |
indole-acetic acid biosynthesis | exact |
indole-3-acetate biosynthetic process | exact |
indole-3-acetate biosynthesis | exact |
indole acetic acid biosynthetic process | exact |
indole acetic acid biosynthesis | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0009684
Child Term | Relationship to GO:0009684 |
---|---|
indoleacetic acid biosynthetic process via tryptophan
|
is_a |
tryptophan-independent indoleacetic acid biosynthetic process
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0009684 | indoleacetic acid biosynthetic process | Never in Taxon | 4895 | Schizosaccharomyces |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q84P23 | 3702 | 4CLL9_ARATH | GO:0009851 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 | |
NOT-qualified manual | protein | Q84P23 | 3702 | 4CLL9_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 | |
NOT-qualified manual | protein | Q8VY26 | 3702 | CCD8_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:16507088 | |
NOT-qualified manual | protein | Q9LR47 | 3702 | IP5P6_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10559439 | |
NOT-qualified manual | protein | Q9M0X9 | 3702 | 4CLL7_ARATH | GO:0009851 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 | |
NOT-qualified manual | protein | Q9M0X9 | 3702 | 4CLL7_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_output | CHEBI | CHEBI:30854 | indole-3-acetate |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0009684 based on ALL annotations
The top 100 of 100 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
indoleacetic acid biosynthetic process
|
4,331,973.00 | 100.00 | 45 | 45 |
indoleacetamide hydrolase activity
|
4,331,973.00 | 37.78 | 17 | 17 |
L-tryptophan:2-oxoglutarate aminotransferase activity
|
1,804,988.80 | 9.62 | 5 | 12 |
L-tyrosine-pyruvate transaminase activity
|
4,331,973.00 | 8.89 | 4 | 4 |
L-phenylalanine-pyruvate transaminase activity
|
4,331,973.00 | 8.89 | 4 | 4 |
L-methionine:2-oxoglutarate aminotransferase activity
|
3,465,578.50 | 8.70 | 4 | 5 |
L-tryptophan:pyruvate aminotransferase activity
|
984,539.30 | 8.06 | 5 | 22 |
S-alkylthiohydroximate lyase activity
|
4,331,973.50 | 6.67 | 3 | 3 |
indole glucosinolate biosynthetic process
|
601,662.94 | 6.58 | 5 | 36 |
shade avoidance
|
339,023.97 | 5.96 | 9 | 115 |
Totals | 631 | 215014223 |
No co-occurrence statistics for GO:0009684 based on MANUAL annotations
The top 73 of 73 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
indoleacetic acid biosynthetic process
|
117,436.27 | 100.00 | 11 | 11 |
L-tryptophan:pyruvate aminotransferase activity
|
78,290.85 | 16.67 | 2 | 3 |
indole-3-acetonitrile nitrile hydratase activity
|
78,290.85 | 16.67 | 2 | 3 |
indole-3-acetonitrile nitrilase activity
|
58,718.14 | 15.38 | 2 | 4 |
L-tryptophan:2-oxoglutarate aminotransferase activity
|
58,718.14 | 15.38 | 2 | 4 |
defense response by callose deposition in cell wall
|
22,019.30 | 12.50 | 3 | 16 |
adventitious root development
|
23,487.26 | 10.53 | 2 | 10 |
induced systemic resistance
|
16,014.04 | 10.00 | 3 | 22 |
L-phenylalanine-2-oxoglutarate transaminase activity
|
117,436.27 | 9.09 | 1 | 1 |
L-tyrosine-pyruvate transaminase activity
|
117,436.27 | 9.09 | 1 | 1 |
Totals | 128 | 616562 |
Change Log
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- Definition / Synonyms
- Definition / Synonyms
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- Cross-references
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
2016-11-28 | Added | RELATION | is a GO:0042435 (indole-containing compound biosynthetic process) |
2016-11-28 | Added | RELATION | is a GO:0009683 (indoleacetic acid metabolic process) |
2016-06-22 | Deleted | RELATION | is a GO:0042435 (indole-containing compound biosynthetic process) |
2016-06-22 | Deleted | RELATION | is a GO:0009683 (indoleacetic acid metabolic process) |
2012-11-02 | Added | RELATION | is a GO:0072330 (monocarboxylic acid biosynthetic process) |
2012-11-02 | Deleted | RELATION | is a GO:0046394 (carboxylic acid biosynthetic process) |
2010-12-01 | Deleted | RELATION | is a GO:0044271 (obsolete cellular nitrogen compound biosynthetic process) |
2009-08-31 | Added | RELATION | is a GO:0044271 (obsolete cellular nitrogen compound biosynthetic process) |
2009-07-12 | Added | RELATION | is a GO:0046394 (carboxylic acid biosynthetic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-01-15 | Updated | TERM | indoleacetic acid biosynthetic process |
2002-08-01 | Updated | TERM | indoleacetic acid biosynthesis |
2001-05-16 | Added | TERM | indole acetic acid biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants. |
2007-08-09 | Deleted | SYNONYM | IAA biosynthetic process |
2007-08-09 | Deleted | SYNONYM | indole acetic acid biosynthesis |
2007-08-09 | Deleted | SYNONYM | indoleacetic acid anabolism |
2007-08-09 | Deleted | SYNONYM | indoleacetic acid formation |
2007-08-09 | Deleted | SYNONYM | indoleacetic acid synthesis |
2007-08-09 | Deleted | SYNONYM | indole-3-acetate biosynthesis |
2007-08-09 | Deleted | SYNONYM | indole-3-acetate biosynthetic process |
2007-08-09 | Deleted | SYNONYM | indole-acetic acid biosynthesis |
2007-08-09 | Deleted | SYNONYM | indole-acetic acid biosynthetic process |
2007-08-09 | Deleted | SYNONYM | indole acetic acid biosynthetic process |
2007-08-09 | Deleted | SYNONYM | indoleacetic acid biosynthesis |
2007-08-09 | Added | SYNONYM | indoleacetic acid formation |
2007-08-09 | Added | SYNONYM | indole acetic acid biosynthetic process |
2007-08-09 | Added | SYNONYM | indole acetic acid biosynthesis |
2007-08-09 | Added | SYNONYM | IAA biosynthetic process |
2007-08-09 | Added | SYNONYM | indoleacetic acid synthesis |
2007-08-09 | Added | SYNONYM | indole-3-acetate biosynthesis |
2007-08-09 | Added | SYNONYM | indole-3-acetate biosynthetic process |
2007-08-09 | Added | SYNONYM | indole-acetic acid biosynthesis |
2007-08-09 | Added | SYNONYM | indoleacetic acid biosynthesis |
2007-08-09 | Added | SYNONYM | indoleacetic acid anabolism |
2007-08-09 | Added | SYNONYM | indole-acetic acid biosynthetic process |
2007-07-14 | Added | SYNONYM | IAA biosynthetic process |
2007-02-05 | Added | SYNONYM | indole-acetic acid biosynthetic process |
2007-02-05 | Added | SYNONYM | indole-acetic acid biosynthesis |
2007-02-05 | Added | SYNONYM | indole-3-acetate biosynthetic process |
2007-02-05 | Added | SYNONYM | indole-3-acetate biosynthesis |
2007-01-15 | Added | SYNONYM | indole acetic acid biosynthetic process |
2007-01-15 | Added | SYNONYM | indoleacetic acid biosynthesis |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants. |
2005-08-10 | Added | SYNONYM | indoleacetic acid anabolism |
2005-08-10 | Added | SYNONYM | indoleacetic acid formation |
2005-08-10 | Added | SYNONYM | indoleacetic acid synthesis |
2004-04-19 | Added | SYNONYM | indole acetic acid biosynthesis |
2004-04-16 | Deleted | SYNONYM | indole acetic acid biosynthesis |
2003-03-19 | Deleted | SYNONYM | auxin biosynthesis |
2002-11-27 | Updated | DEFINITION | The formation from simpler components of indole-3-acetic acid, a compound which functions as a growth regulator in plants. |
2002-08-01 | Added | SYNONYM | indole acetic acid biosynthesis |
2001-08-06 | Added | DEFINITION | Biosynthesis of indole-3-acetic acid ; a compound which functions as a growth regulator in plants. |
2001-05-16 | Added | SYNONYM | auxin biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2016-11-28 | Added | RELATION | is a GO:0042435 (indole-containing compound biosynthetic process) |
2016-11-28 | Added | RELATION | is a GO:0009683 (indoleacetic acid metabolic process) |
2016-06-22 | Deleted | RELATION | is a GO:0042435 (indole-containing compound biosynthetic process) |
2016-06-22 | Deleted | RELATION | is a GO:0009683 (indoleacetic acid metabolic process) |
2012-11-02 | Added | RELATION | is a GO:0072330 (monocarboxylic acid biosynthetic process) |
2012-11-02 | Deleted | RELATION | is a GO:0046394 (carboxylic acid biosynthetic process) |
2010-12-01 | Deleted | RELATION | is a GO:0044271 (obsolete cellular nitrogen compound biosynthetic process) |
2009-08-31 | Added | RELATION | is a GO:0044271 (obsolete cellular nitrogen compound biosynthetic process) |
2009-07-12 | Added | RELATION | is a GO:0046394 (carboxylic acid biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0042435 (indole-containing compound biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0009851 (auxin biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0009683 (indoleacetic acid metabolic process) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
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