This term is obsolete.

GO:0009851 JSON

auxin biosynthetic process

Biological Process

Definition (GO:0009851 GONUTS page)

The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.

13,767 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
auxin biosynthesis exact
auxin synthesis exact
auxin formation exact
auxin anabolism exact

Ancestor Chart

Ancestor chart for GO:0009851
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0009851

Child Term Relationship to
GO:0009851
positive regulation of auxin biosynthetic process
positively_regulates
regulation of auxin biosynthetic process
regulates
indoleacetic acid biosynthetic process
is_a
indoleacetic acid conjugate biosynthetic process
is_a

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0009851 auxin biosynthetic process Never in Taxon 4895 Schizosaccharomyces

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein Q84P23 3702 4CLL9_ARATH GO:0009851 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481
NOT-qualified manual protein Q84P23 3702 4CLL9_ARATH GO:0009850 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481
NOT-qualified manual protein Q8VY26 3702 CCD8_ARATH GO:0009850 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:16507088
NOT-qualified manual protein Q9LR47 3702 IP5P6_ARATH GO:0009850 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10559439
NOT-qualified manual protein Q9M0X9 3702 4CLL7_ARATH GO:0009851 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481
NOT-qualified manual protein Q9M0X9 3702 4CLL7_ARATH GO:0009850 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481

Cross-references

Database ID Description
InterPro IPR012142 Tryptophan 2-monooxygenase
InterPro IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae
InterPro IPR017765 Indole-3-pyruvate decarboxylase
UniProtKB-KW KW-0073 Auxin biosynthesis

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0009851 based on ALL annotations
The top 100 of 214 co-occurring terms
Co-occurring Term PR S% #Together #Compared
14,669.45 100.00 13,508 13,508
12,215.80 8.48 1,165 1,399
2,183.04 7.40 1,734 11,652
664.06 3.95 3,220 71,132
7,509.36 3.09 430 840
10,949.15 2.66 362 485
435.16 2.47 1,754 59,128
337.12 1.99 1,730 75,279
516.87 1.69 425 12,062
427.81 1.54 425 14,573
Totals 56253 64964418
No co-occurrence statistics for GO:0009851 based on MANUAL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term PR S% #Together #Compared
auxin biosynthetic process
5,306.52 100.00 266 266
flavin adenine dinucleotide binding
348.87 6.54 247 3,757
monooxygenase activity
247.42 4.65 248 5,319
indole-3-pyruvate monooxygenase activity
5,306.52 1.50 4 4
indole-3-acetaldehyde oxidase activity
2,653.26 1.12 3 6
intracellular auxin homeostasis
1,179.23 0.73 2 9
regulation of defense response to bacterium
530.65 0.70 2 20
lateral root formation
168.46 0.61 2 63
response to ethylene
40.55 0.60 7 916
indole-3-acetic acid amido synthetase activity
107.20 0.55 2 99
Totals 895 614661

Change Log

Timestamp Action Category Detail
2024-10-24 Deleted RELATION is a GO:0044249 (obsolete cellular biosynthetic process)
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4895 (Schizosaccharomyces)
2009-11-24 Added RELATION is a GO:0044249 (obsolete cellular biosynthetic process)
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.
2008-04-01 Updated RELATION is a GO:0042446 (hormone biosynthetic process)
2008-04-01 Updated RELATION is a GO:0009850 (auxin metabolic process)
2007-08-09 Added SYNONYM auxin anabolism
2007-08-09 Added SYNONYM auxin biosynthesis
2007-08-09 Added SYNONYM auxin formation
Timestamp Action Category Detail
2007-01-15 Updated TERM auxin biosynthetic process
2001-12-17 Added TERM auxin biosynthesis
Timestamp Action Category Detail
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.
2007-08-09 Added SYNONYM auxin anabolism
2007-08-09 Added SYNONYM auxin biosynthesis
2007-08-09 Added SYNONYM auxin formation
2007-08-09 Added SYNONYM auxin synthesis
2007-08-09 Deleted SYNONYM auxin biosynthesis
2007-08-09 Deleted SYNONYM auxin anabolism
2007-08-09 Deleted SYNONYM auxin formation
2007-08-09 Deleted SYNONYM auxin synthesis
2007-01-15 Added SYNONYM auxin biosynthesis
2006-05-04 Updated DEFINITION The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.
2005-08-10 Added SYNONYM auxin anabolism
2005-08-10 Added SYNONYM auxin formation
2005-08-10 Added SYNONYM auxin synthesis
2002-11-27 Added DEFINITION The formation from simpler components of auxins, plant hormones that regulate aspects of plant growth.
Timestamp Action Category Detail
2024-10-24 Deleted RELATION is a GO:0044249 (obsolete cellular biosynthetic process)
2009-11-24 Added RELATION is a GO:0044249 (obsolete cellular biosynthetic process)
2008-04-01 Updated RELATION is a GO:0042446 (hormone biosynthetic process)
2008-04-01 Updated RELATION is a GO:0009850 (auxin metabolic process)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4895 (Schizosaccharomyces)
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