GO:0009851
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auxin biosynthetic process
Biological Process
Definition (GO:0009851 GONUTS page)
The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
auxin biosynthesis | exact |
auxin synthesis | exact |
auxin formation | exact |
auxin anabolism | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0009851
Child Term | Relationship to GO:0009851 |
---|---|
positive regulation of auxin biosynthetic process
|
positively_regulates |
regulation of auxin biosynthetic process
|
regulates |
indoleacetic acid biosynthetic process
|
is_a |
indoleacetic acid conjugate biosynthetic process
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0009851 | auxin biosynthetic process | Never in Taxon | 4895 | Schizosaccharomyces |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q84P23 | 3702 | 4CLL9_ARATH | GO:0009851 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 | |
NOT-qualified manual | protein | Q84P23 | 3702 | 4CLL9_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 | |
NOT-qualified manual | protein | Q8VY26 | 3702 | CCD8_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:16507088 | |
NOT-qualified manual | protein | Q9LR47 | 3702 | IP5P6_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:10559439 | |
NOT-qualified manual | protein | Q9M0X9 | 3702 | 4CLL7_ARATH | GO:0009851 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 | |
NOT-qualified manual | protein | Q9M0X9 | 3702 | 4CLL7_ARATH | GO:0009850 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15677481 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR012142 | Tryptophan 2-monooxygenase |
InterPro | IPR017764 | Indole-3-pyruvate decarboxylase, Enterobacteriaceae |
InterPro | IPR017765 | Indole-3-pyruvate decarboxylase |
UniProtKB-KW | KW-0073 | Auxin biosynthesis |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0009851 based on ALL annotations
The top 100 of 214 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
|
14,669.45 | 100.00 | 13,508 | 13,508 |
|
12,215.80 | 8.48 | 1,165 | 1,399 |
|
2,183.04 | 7.40 | 1,734 | 11,652 |
|
664.06 | 3.95 | 3,220 | 71,132 |
|
7,509.36 | 3.09 | 430 | 840 |
|
10,949.15 | 2.66 | 362 | 485 |
|
435.16 | 2.47 | 1,754 | 59,128 |
|
337.12 | 1.99 | 1,730 | 75,279 |
|
516.87 | 1.69 | 425 | 12,062 |
|
427.81 | 1.54 | 425 | 14,573 |
Totals | 56253 | 64964418 |
No co-occurrence statistics for GO:0009851 based on MANUAL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
auxin biosynthetic process
|
5,306.52 | 100.00 | 266 | 266 |
flavin adenine dinucleotide binding
|
348.87 | 6.54 | 247 | 3,757 |
monooxygenase activity
|
247.42 | 4.65 | 248 | 5,319 |
indole-3-pyruvate monooxygenase activity
|
5,306.52 | 1.50 | 4 | 4 |
indole-3-acetaldehyde oxidase activity
|
2,653.26 | 1.12 | 3 | 6 |
intracellular auxin homeostasis
|
1,179.23 | 0.73 | 2 | 9 |
regulation of defense response to bacterium
|
530.65 | 0.70 | 2 | 20 |
lateral root formation
|
168.46 | 0.61 | 2 | 63 |
response to ethylene
|
40.55 | 0.60 | 7 | 916 |
indole-3-acetic acid amido synthetase activity
|
107.20 | 0.55 | 2 | 99 |
Totals | 895 | 614661 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-10-24 | Deleted | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
2009-11-24 | Added | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth. |
2008-04-01 | Updated | RELATION | is a GO:0042446 (hormone biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0009850 (auxin metabolic process) |
2007-08-09 | Added | SYNONYM | auxin anabolism |
2007-08-09 | Added | SYNONYM | auxin biosynthesis |
2007-08-09 | Added | SYNONYM | auxin formation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2007-01-15 | Updated | TERM | auxin biosynthetic process |
2001-12-17 | Added | TERM | auxin biosynthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth. |
2007-08-09 | Added | SYNONYM | auxin anabolism |
2007-08-09 | Added | SYNONYM | auxin biosynthesis |
2007-08-09 | Added | SYNONYM | auxin formation |
2007-08-09 | Added | SYNONYM | auxin synthesis |
2007-08-09 | Deleted | SYNONYM | auxin biosynthesis |
2007-08-09 | Deleted | SYNONYM | auxin anabolism |
2007-08-09 | Deleted | SYNONYM | auxin formation |
2007-08-09 | Deleted | SYNONYM | auxin synthesis |
2007-01-15 | Added | SYNONYM | auxin biosynthesis |
2006-05-04 | Updated | DEFINITION | The chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth. |
2005-08-10 | Added | SYNONYM | auxin anabolism |
2005-08-10 | Added | SYNONYM | auxin formation |
2005-08-10 | Added | SYNONYM | auxin synthesis |
2002-11-27 | Added | DEFINITION | The formation from simpler components of auxins, plant hormones that regulate aspects of plant growth. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-10-24 | Deleted | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
2009-11-24 | Added | RELATION | is a GO:0044249 (obsolete cellular biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0042446 (hormone biosynthetic process) |
2008-04-01 | Updated | RELATION | is a GO:0009850 (auxin metabolic process) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
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