GO:0019085
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early viral transcription
Biological Process
Definition (GO:0019085 GONUTS page)
The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
immediate early viral mRNA transcription | related |
Ancestor Chart
GO Discussions
The GO editorial group is intending to improve the information provided in this area of the GO. If you would like to be involved in discussions regarding this development activity, please email the GO Consortium. Please note that it is still appropriate to use this term for curation or analysis purpose:
Ontology Development Project | |
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Viral Processes | Link |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0019085 | early viral transcription | Never in Taxon | 4896 | Schizosaccharomyces pombe |
More information on taxon constraints in GO is available here
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0019085 based on ALL annotations
The top 32 of 32 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
early viral transcription
|
1,053,723.10 | 100.00 | 185 | 185 |
late viral transcription
|
119,814.86 | 11.37 | 185 | 1,627 |
7SK snRNA binding
|
50,003.67 | 4.55 | 96 | 2,023 |
cyclin/CDK positive transcription elongation factor complex
|
18,964.65 | 1.77 | 96 | 5,334 |
transcription coactivator binding
|
18,957.54 | 1.77 | 96 | 5,336 |
skeletal muscle tissue development
|
9,625.41 | 0.91 | 93 | 10,181 |
Mon1-Ccz1 complex
|
7,673.16 | 0.72 | 89 | 12,222 |
positive regulation of DNA-templated transcription, elongation
|
5,009.78 | 0.44 | 12 | 2,524 |
regulation of cyclin-dependent protein serine/threonine kinase activity
|
21,074.46 | 0.43 | 1 | 50 |
cyclin-dependent protein serine/threonine kinase activator activity
|
1,926.66 | 0.18 | 12 | 6,563 |
Totals | 2118 | 129552790 |
No co-occurrence statistics for GO:0019085 based on MANUAL annotations
The top 23 of 23 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
early viral transcription
|
143,533.22 | 100.00 | 9 | 9 |
late viral transcription
|
71,766.61 | 50.00 | 9 | 18 |
7SK snRNA binding
|
8,344.96 | 5.56 | 5 | 86 |
RNA polymerase binding
|
3,642.98 | 2.49 | 5 | 197 |
Mon1-Ccz1 complex
|
3,479.59 | 2.35 | 4 | 165 |
transcription coactivator binding
|
2,859.23 | 1.96 | 5 | 251 |
regulation of cyclin-dependent protein serine/threonine kinase activity
|
2,870.66 | 1.72 | 1 | 50 |
positive regulation of DNA-templated transcription, elongation
|
1,893.58 | 1.31 | 5 | 379 |
cyclin/CDK positive transcription elongation factor complex
|
1,729.32 | 1.19 | 5 | 415 |
cyclin-dependent protein serine/threonine kinase activator activity
|
1,333.95 | 0.92 | 5 | 538 |
Totals | 94 | 748523 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe) |
2013-11-24 | Deleted | DEFINITION | The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell. |
2013-11-24 | Added | DEFINITION | The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell. |
2013-11-16 | Added | DEFINITION | The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell. |
2013-11-16 | Deleted | DEFINITION | The transcriptional period of the earliest expressed viral genes, mainly encoding transcriptional regulators. |
2013-11-16 | Deleted | RELATION | is a GO:0009299 (mRNA transcription) |
2013-11-16 | Added | SYNONYM | immediate early viral mRNA transcription |
2013-11-16 | Deleted | SYNONYM | alpha protein |
2013-11-16 | Updated | TERM | early viral transcription |
2010-02-27 | Added | RELATION | is a GO:0009299 (mRNA transcription) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-11-16 | Updated | TERM | early viral transcription |
2001-10-01 | Added | TERM | immediate early viral mRNA transcription |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-11-24 | Deleted | DEFINITION | The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell. |
2013-11-24 | Added | DEFINITION | The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell. |
2013-11-16 | Added | DEFINITION | The first phase of viral transcription that occurs after entry of the virus into the host cell, but prior to viral genome replication. It involves the transcription of genes for non-structural proteins, and for lytic viruses, the early gene products are involved in establishing control over the host cell. |
2013-11-16 | Deleted | DEFINITION | The transcriptional period of the earliest expressed viral genes, mainly encoding transcriptional regulators. |
2013-11-16 | Added | SYNONYM | immediate early viral mRNA transcription |
2013-11-16 | Deleted | SYNONYM | alpha protein |
2008-05-13 | Added | DEFINITION | The transcriptional period of the earliest expressed viral genes, mainly encoding transcriptional regulators. |
2008-05-12 | Deleted | DEFINITION | The transcriptional period of the earliest expressed viral genes, mainly encoding transcriptional regulators. |
2007-08-09 | Added | SYNONYM | alpha protein |
2007-08-09 | Deleted | SYNONYM | alpha protein |
2004-04-19 | Added | SYNONYM | alpha protein |
2004-04-16 | Deleted | SYNONYM | alpha protein |
2002-11-27 | Added | DEFINITION | The transcriptional period of the earliest expressed viral genes, mainly encoding transcriptional regulators. |
2001-10-01 | Added | SYNONYM | alpha protein |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-11-16 | Deleted | RELATION | is a GO:0009299 (mRNA transcription) |
2010-02-27 | Added | RELATION | is a GO:0009299 (mRNA transcription) |
2008-04-01 | Updated | RELATION | is a GO:0019083 (viral transcription) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe) |
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