GO:0019904
JSON
protein domain specific binding
Molecular Function
Definition (GO:0019904 GONUTS page)
Binding to a specific domain of a protein.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
protein domain-specific binding | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0019904
Child Term | Relationship to GO:0019904 |
---|---|
FFAT motif binding
|
is_a |
RING-like zinc finger domain binding
|
is_a |
DH domain binding
|
is_a |
LEM domain binding
|
is_a |
LBD domain binding
|
is_a |
type-II dockerin domain binding
|
is_a |
FYXD domain binding
|
is_a |
polo box domain specific binding
|
is_a |
PDZ domain binding
|
is_a |
WW domain binding
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P21333-1 | 9606 | FLNA_HUMAN | GO:0005515 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684 | |
NOT-qualified manual | protein | P63026 | 9913 | VAMP2_BOVIN | GO:0005515 | 2 NOT-qualified manual annotations exist with evidence code ECO:0000353 from this reference: PMID:20702699 | |
NOT-qualified manual | protein | Q86V48 | 9606 | LUZP1_HUMAN | GO:0005515 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000353 from this reference: PMID:30990684 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR000296 | Cation-dependent mannose-6-phosphate receptor |
InterPro | IPR010504 | Arfaptin homology (AH) domain |
InterPro | IPR013638 | Fork-head N-terminal |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0019904 based on ALL annotations
The top 100 of 5,561 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
protein domain specific binding
|
4,898.33 | 100.00 | 39,797 | 39,797 |
trans-activation response element binding
|
4,898.33 | 22.30 | 8,875 | 8,875 |
symbiont-mediated suppression of host translation initiation
|
4,461.02 | 21.82 | 8,875 | 9,745 |
symbiont-mediated perturbation of host chromatin organization
|
4,392.07 | 21.74 | 8,875 | 9,898 |
actinin binding
|
3,220.80 | 19.98 | 8,876 | 13,499 |
RNA-binding transcription regulator activity
|
2,512.87 | 18.40 | 8,875 | 17,300 |
positive regulation of viral transcription
|
2,400.74 | 18.10 | 8,875 | 18,108 |
protein serine/threonine phosphatase inhibitor activity
|
2,044.14 | 17.01 | 8,875 | 21,267 |
cyclin binding
|
1,321.75 | 13.99 | 8,964 | 33,220 |
positive regulation of transcription elongation by RNA polymerase II
|
1,072.14 | 12.74 | 9,296 | 42,471 |
Totals | 299878 | 7537827 |
No co-occurrence statistics for GO:0019904 based on MANUAL annotations
The top 100 of 5,018 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
protein domain specific binding
|
1,147.25 | 100.00 | 1,126 | 1,126 |
protein-containing complex
|
73.35 | 5.24 | 254 | 3,973 |
DNA-binding transcription factor binding
|
112.62 | 5.07 | 107 | 1,090 |
enzyme binding
|
71.03 | 3.67 | 93 | 1,502 |
establishment of protein localization
|
176.50 | 3.22 | 44 | 286 |
protein-containing complex binding
|
49.82 | 3.02 | 102 | 2,349 |
cerebral cortex development
|
122.34 | 2.99 | 45 | 422 |
astral microtubule organization
|
458.90 | 2.89 | 34 | 85 |
glutamatergic synapse
|
44.26 | 2.87 | 114 | 2,955 |
positive regulation of gene expression
|
39.62 | 2.64 | 114 | 3,301 |
Totals | 5706 | 122005 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_chembl | 296 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with a specific domain of a protein. |
2021-05-24 | Added | DEFINITION | Binding to a specific domain of a protein. |
2015-05-19 | Added | SUBSET | goslim_chembl |
2015-05-19 | Deleted | SUBSET | goslim_ChEMBL |
2015-05-11 | Added | SUBSET | goslim_ChEMBL |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with a specific domain of a protein. |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with a specific domain of a protein. |
2008-05-13 | Added | DEFINITION | Interacting selectively with a specific domain of a protein. |
2008-05-12 | Deleted | DEFINITION | Interacting selectively with a specific domain of a protein. |
2008-04-01 | Updated | RELATION | is a GO:0005515 (protein binding) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2003-06-10 | Updated | TERM | protein domain specific binding |
2003-03-19 | Updated | TERM | protein domain specific binding activity |
2002-01-08 | Added | TERM | protein domain specific binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with a specific domain of a protein. |
2021-05-24 | Added | DEFINITION | Binding to a specific domain of a protein. |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with a specific domain of a protein. |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with a specific domain of a protein. |
2008-05-13 | Added | DEFINITION | Interacting selectively with a specific domain of a protein. |
2008-05-12 | Deleted | DEFINITION | Interacting selectively with a specific domain of a protein. |
2007-08-09 | Added | SYNONYM | protein domain-specific binding |
2007-08-09 | Deleted | SYNONYM | protein domain-specific binding |
2005-10-30 | Added | SYNONYM | protein domain-specific binding |
2003-05-07 | Added | DEFINITION | Interacting selectively with a specific domain of a protein. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0005515 (protein binding) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2015-05-19 | Added | SUBSET | goslim_chembl |
2015-05-19 | Deleted | SUBSET | goslim_ChEMBL |
2015-05-11 | Added | SUBSET | goslim_ChEMBL |
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