GO:0030136
JSON
clathrin-coated vesicle
Cellular Component
Definition (GO:0030136 GONUTS page)
A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. PMID:11252894
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0030136
Child Term | Relationship to GO:0030136 |
---|---|
clathrin-sculpted vesicle
|
is_a |
clathrin-coated vesicle membrane
|
part_of |
trans-Golgi network transport vesicle
|
is_a |
clathrin-coated endocytic vesicle
|
is_a |
Weibel-Palade body
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0030136 | clathrin-coated vesicle | Only in Taxon | 131567 | cellular organisms |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0D1E8X3 | 237631 | A0A0D1E8X3_USTMA | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A0G2JZ79 | 10116 | SIR1_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1D8PHF8 | 237561 | A0A1D8PHF8_CANAL | GO:0031410 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936 | |
NOT-qualified manual | protein | A0A1L8G9S0 | 8355 | A0A1L8G9S0_XENLA | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A1S4L3K3 | 6945 | A0A1S4L3K3_IXOSC | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A2K5ATM2 | 6239 | A0A2K5ATM2_CAEEL | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A2K5ATM9 | 6239 | A0A2K5ATM9_CAEEL | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR014712 | ANTH domain superfamily |
NIF_Subcellular | sao148845161 | |
UniProtKB-SubCell | SL-0070 | Clathrin-coated vesicle |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0030136 based on ALL annotations
The top 100 of 1,790 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
clathrin-coated vesicle
|
3,613.26 | 100.00 | 53,951 | 53,951 |
clathrin coat assembly
|
3,140.31 | 53.82 | 31,599 | 36,358 |
clathrin-dependent endocytosis
|
2,066.22 | 38.00 | 28,654 | 50,108 |
1-phosphatidylinositol binding
|
2,887.36 | 30.98 | 18,126 | 22,683 |
clathrin heavy chain binding
|
2,635.70 | 29.43 | 17,822 | 24,432 |
clathrin-coated pit
|
1,307.66 | 26.28 | 26,417 | 72,994 |
clathrin binding
|
1,225.56 | 25.71 | 27,789 | 81,929 |
extrinsic component of presynaptic endocytic zone membrane
|
3,603.52 | 17.14 | 9,253 | 9,278 |
phosphatidylinositol-4,5-bisphosphate binding
|
867.16 | 15.92 | 17,315 | 72,148 |
synaptic vesicle budding from presynaptic endocytic zone membrane
|
1,579.08 | 14.03 | 9,240 | 21,143 |
Totals | 517625 | 10817566 |
No co-occurrence statistics for GO:0030136 based on MANUAL annotations
The top 100 of 1,113 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
clathrin-coated vesicle
|
1,035.10 | 100.00 | 1,248 | 1,248 |
clathrin-coated pit
|
888.00 | 59.32 | 821 | 957 |
1-phosphatidylinositol binding
|
878.56 | 52.58 | 724 | 853 |
clathrin heavy chain binding
|
782.86 | 50.24 | 748 | 989 |
clathrin-dependent endocytosis
|
486.29 | 37.44 | 809 | 1,722 |
vesicle budding from membrane
|
531.56 | 33.30 | 607 | 1,182 |
phosphatidylinositol-4,5-bisphosphate binding
|
442.34 | 33.14 | 744 | 1,741 |
SNARE binding
|
169.90 | 14.68 | 725 | 4,417 |
clathrin coat assembly
|
671.90 | 11.14 | 148 | 228 |
clathrin adaptor activity
|
285.42 | 9.86 | 166 | 602 |
Totals | 9646 | 114496 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2010-02-04 | Added | XREF | NIF_Subcellular:sao148845161 |
2008-05-13 | Added | DEFINITION | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. |
2008-05-12 | Deleted | DEFINITION | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. |
2008-04-01 | Updated | RELATION | is a GO:0030135 (coated vesicle) |
2002-11-27 | Added | DEFINITION | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. |
2001-08-21 | Added | TERM | clathrin-coated vesicle |
Timestamp | Action | Category | Detail |
---|---|---|---|
2001-08-21 | Added | TERM | clathrin-coated vesicle |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. |
2008-05-12 | Deleted | DEFINITION | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. |
2002-11-27 | Added | DEFINITION | A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0030135 (coated vesicle) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-02-04 | Added | XREF | NIF_Subcellular:sao148845161 |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
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