GO:0030478
JSON
actin cap
Cellular Component
Definition (GO:0030478 GONUTS page)
Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae. PMID:21494665
Secondary IDs
GO:0000143
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0030478 | actin cap | Only in Taxon | 131567 | cellular organisms |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0D1E8X3 | 5270 | A0A0D1E8X3_MYCMD | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A0G2JZ79 | 10116 | SIR1_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1L8G9S0 | 8355 | A0A1L8G9S0_XENLA | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A1S4L3K3 | 6945 | A0A1S4L3K3_IXOSC | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A2K5ATM2 | 6239 | A0A2K5ATM2_CAEEL | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A2K5ATM9 | 6239 | A0A2K5ATM9_CAEEL | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A2K5ATP6 | 6239 | A0A2K5ATP6_CAEEL | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0030478 based on ALL annotations
The top 100 of 228 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
actin cap
|
506,789.90 | 100.00 | 391 | 391 |
regulation of establishment of T cell polarity
|
506,789.94 | 24.30 | 95 | 95 |
regulation of plasma membrane raft polarization
|
506,789.94 | 24.30 | 95 | 95 |
regulation of receptor clustering
|
506,789.94 | 24.30 | 95 | 95 |
negative regulation of membrane tubulation
|
260,243.48 | 19.75 | 95 | 185 |
striated muscle atrophy
|
250,755.44 | 19.47 | 95 | 192 |
renal protein absorption
|
239,527.58 | 19.11 | 95 | 201 |
positive regulation of protein processing in phagocytic vesicle
|
249,372.81 | 19.10 | 93 | 189 |
phosphatidylinositol 3-kinase catalytic subunit binding
|
194,133.25 | 17.46 | 95 | 248 |
regulation of podosome assembly
|
177,657.00 | 16.75 | 95 | 271 |
Totals | 5934 | 659097 |
No co-occurrence statistics for GO:0030478 based on MANUAL annotations
The top 100 of 206 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
actin cap
|
42,773.73 | 100.00 | 33 | 33 |
anterior midgut invagination
|
42,773.73 | 21.21 | 7 | 7 |
posterior midgut invagination
|
29,941.61 | 19.44 | 7 | 10 |
pseudocleavage involved in syncytial blastoderm formation
|
15,758.74 | 15.56 | 7 | 19 |
regulation of myosin II filament organization
|
14,257.91 | 14.89 | 7 | 21 |
pole cell development
|
13,609.82 | 14.58 | 7 | 22 |
regulation of smooth muscle contraction
|
7,374.78 | 14.29 | 15 | 87 |
cell elongation involved in imaginal disc-derived wing morphogenesis
|
11,976.65 | 13.73 | 7 | 25 |
germ-band extension
|
10,693.43 | 12.96 | 7 | 28 |
actin-mediated cell contraction
|
9,073.22 | 11.86 | 7 | 33 |
Totals | 329 | 10943 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2019-09-12 | Deleted | RELATION | is a GO:0044430 (obsolete cytoskeletal part) |
2019-09-12 | Deleted | RELATION | is a GO:0044448 (obsolete cell cortex part) |
2019-09-12 | Added | RELATION | is a GO:0110165 (cellular anatomical structure) |
2009-06-11 | Added | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae. |
2009-06-11 | Deleted | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
2009-06-11 | Deleted | SYNONYM | actin cap (sensu Fungi) |
2009-06-11 | Deleted | SYNONYM | actin cap (sensu Saccharomyces) |
2008-05-13 | Added | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
2008-05-12 | Deleted | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2004-11-25 | Updated | TERM | actin cap |
2001-12-13 | Added | TERM | actin cap (sensu Fungi) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-06-11 | Added | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. An example of this is the actin cap found in Saccharomyces cerevisiae. |
2009-06-11 | Deleted | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
2009-06-11 | Deleted | SYNONYM | actin cap (sensu Fungi) |
2009-06-11 | Deleted | SYNONYM | actin cap (sensu Saccharomyces) |
2008-05-13 | Added | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
2008-05-12 | Deleted | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
2007-08-09 | Added | SYNONYM | actin cap (sensu Fungi) |
2007-08-09 | Deleted | SYNONYM | actin cap (sensu Saccharomyces) |
2007-08-09 | Deleted | SYNONYM | actin cap (sensu Fungi) |
2007-08-09 | Added | SYNONYM | actin cap (sensu Saccharomyces) |
2007-01-18 | Deleted | SYNONYM | actin cap (sensu the Fungi research community) |
2007-01-18 | Added | SYNONYM | actin cap (sensu Saccharomyces) |
2007-01-18 | Added | SYNONYM | actin cap (sensu Fungi) |
2007-01-18 | Deleted | SYNONYM | actin cap (sensu the Saccharomyces research community) |
2007-01-15 | Deleted | SYNONYM | actin cap (sensu Saccharomyces) |
2007-01-15 | Added | SYNONYM | actin cap (sensu the Fungi research community) |
2007-01-15 | Deleted | SYNONYM | actin cap (sensu Fungi) |
2007-01-15 | Added | SYNONYM | actin cap (sensu the Saccharomyces research community) |
2004-11-25 | Added | SYNONYM | actin cap (sensu Fungi) |
2004-11-24 | Updated | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. |
2004-04-19 | Added | SYNONYM | actin cap (sensu Saccharomyces) |
2004-04-16 | Deleted | SYNONYM | actin cap (sensu Saccharomyces) |
2004-04-02 | Added | SYNONYM | actin cap (sensu Saccharomyces) |
2004-02-24 | Updated | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell. As in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751). |
2002-11-27 | Added | DEFINITION | Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a fungal cell. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2019-09-12 | Deleted | RELATION | is a GO:0044430 (obsolete cytoskeletal part) |
2019-09-12 | Deleted | RELATION | is a GO:0044448 (obsolete cell cortex part) |
2019-09-12 | Added | RELATION | is a GO:0110165 (cellular anatomical structure) |
2008-04-01 | Updated | RELATION | is a GO:0044430 (obsolete cytoskeletal part) |
2008-04-01 | Updated | RELATION | part of GO:0030864 (cortical actin cytoskeleton) |
2008-04-01 | Updated | RELATION | is a GO:0044448 (obsolete cell cortex part) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2004-04-02 | Added | SECONDARY | GO:0000143 (actin cap (sensu Saccharomyces)) |
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link