GO:0030622
JSON
U4atac snRNA binding
Molecular Function
Definition (GO:0030622 GONUTS page)
Binding to a U4atac small nuclear RNA (U4atac snRNA).
Ancestor Chart
Ancestor chart for GO:0030622
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Binding term considerations | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | B1WC40 | 10116 | NCBP2_RAT | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | P52298 | 9606 | NCBP2_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:7478990 | |
NOT-qualified manual | protein | P52299 | 8355 | NCBP2_XENLA | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q15287 | 9606 | RNPS1_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:22388736 | |
NOT-qualified manual | protein | Q23500 | 6239 | ACOHC_CAEEL | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12438312 | |
NOT-qualified manual | protein | Q52KI8 | 10090 | SRRM1_MOUSE | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: PMID:9531537 | |
NOT-qualified manual | protein | Q6AYK1 | 10116 | RNPS1_RAT | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q6QN14 | 9606 | U17L6_HUMAN | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17109758 | |
NOT-qualified manual | protein | Q9CQ49 | 10090 | NCBP2_MOUSE | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q9YH12 | 8319 | LSM14_PLEWA | GO:0003723 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9851867 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0030622 based on ALL annotations
The top 78 of 78 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
U4atac snRNA binding
|
35,650.84 | 100.00 | 5,468 | 5,468 |
U6atac snRNP
|
34,987.54 | 93.80 | 5,222 | 5,321 |
pre-mRNA 5'-splice site binding
|
4,394.40 | 12.26 | 5,222 | 42,365 |
mRNA 5'-splice site recognition
|
4,086.14 | 11.40 | 5,222 | 45,561 |
spliceosomal tri-snRNP complex assembly
|
1,118.04 | 3.13 | 5,311 | 169,352 |
U4atac snRNP
|
4,389.62 | 2.27 | 148 | 1,202 |
SMN-Gemin2 complex
|
28,874.23 | 1.78 | 98 | 121 |
ribonucleoprotein complex localization
|
34,840.59 | 1.57 | 86 | 88 |
U2-type precatalytic spliceosome
|
1,049.81 | 1.43 | 148 | 5,026 |
box C/D sno(s)RNA binding
|
16,072.10 | 0.99 | 55 | 122 |
Totals | 31327 | 161323550 |
No co-occurrence statistics for GO:0030622 based on MANUAL annotations
The top 56 of 56 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
U4atac snRNA binding
|
71,766.61 | 100.00 | 18 | 18 |
U4atac snRNP
|
67,281.20 | 78.95 | 15 | 16 |
ribonucleoprotein complex localization
|
57,413.29 | 21.05 | 4 | 5 |
SMN-Gemin2 complex
|
35,883.31 | 14.29 | 3 | 6 |
box C/D sno(s)RNA binding
|
30,757.12 | 13.64 | 3 | 7 |
dense fibrillar component
|
13,048.48 | 7.41 | 2 | 11 |
U4 snRNA binding
|
4,613.57 | 6.04 | 9 | 140 |
U2-type precatalytic spliceosome
|
3,282.01 | 4.53 | 15 | 328 |
MLL1 complex
|
2,233.98 | 3.00 | 8 | 257 |
snRNP binding
|
2,021.59 | 2.56 | 4 | 142 |
Totals | 274 | 881784 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA). |
2021-05-24 | Added | DEFINITION | Binding to a U4atac small nuclear RNA (U4atac snRNA). |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA). |
2008-05-13 | Added | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2008-05-12 | Deleted | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2008-04-01 | Updated | RELATION | is a GO:0017069 (snRNA binding) |
2003-06-10 | Updated | TERM | U4atac snRNA binding |
2003-03-26 | Added | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2003-03-19 | Updated | TERM | U4atac snRNA binding activity |
Timestamp | Action | Category | Detail |
---|---|---|---|
2003-06-10 | Updated | TERM | U4atac snRNA binding |
2003-03-19 | Updated | TERM | U4atac snRNA binding activity |
2002-05-10 | Added | TERM | U4atac snRNA binding |
Timestamp | Action | Category | Detail |
---|---|---|---|
2021-05-24 | Deleted | DEFINITION | Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA). |
2021-05-24 | Added | DEFINITION | Binding to a U4atac small nuclear RNA (U4atac snRNA). |
2009-07-03 | Deleted | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2009-07-03 | Added | DEFINITION | Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA). |
2008-05-13 | Added | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2008-05-12 | Deleted | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
2003-03-26 | Added | DEFINITION | Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA). |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0017069 (snRNA binding) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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