This term is obsolete.

GO:0030622 JSON

U4atac snRNA binding

Molecular Function

Definition (GO:0030622 GONUTS page)

Binding to a U4atac small nuclear RNA (U4atac snRNA).

5,475 annotations

Ancestor Chart

Ancestor chart for GO:0030622
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Ancestor chart

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:

Binding term considerations Link

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein B1WC40 10116 NCBP2_RAT GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein P52298 9606 NCBP2_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:7478990
NOT-qualified manual protein P52299 8355 NCBP2_XENLA GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q15287 9606 RNPS1_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:22388736
NOT-qualified manual protein Q23500 6239 ACOHC_CAEEL GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:12438312
NOT-qualified manual protein Q52KI8 10090 SRRM1_MOUSE GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: PMID:9531537
NOT-qualified manual protein Q6AYK1 10116 RNPS1_RAT GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein Q6QN14 9606 U17L6_HUMAN GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:17109758
NOT-qualified manual protein Q9CQ49 10090 NCBP2_MOUSE GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024
NOT-qualified manual protein Q9YH12 8319 LSM14_PLEWA GO:0003723 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:9851867

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0030622 based on ALL annotations
The top 78 of 78 co-occurring terms
Co-occurring Term PR S% #Together #Compared
U4atac snRNA binding
35,650.84 100.00 5,468 5,468
U6atac snRNP
34,987.54 93.80 5,222 5,321
pre-mRNA 5'-splice site binding
4,394.40 12.26 5,222 42,365
mRNA 5'-splice site recognition
4,086.14 11.40 5,222 45,561
spliceosomal tri-snRNP complex assembly
1,118.04 3.13 5,311 169,352
U4atac snRNP
4,389.62 2.27 148 1,202
SMN-Gemin2 complex
28,874.23 1.78 98 121
ribonucleoprotein complex localization
34,840.59 1.57 86 88
U2-type precatalytic spliceosome
1,049.81 1.43 148 5,026
box C/D sno(s)RNA binding
16,072.10 0.99 55 122
Totals 31327 161323550
No co-occurrence statistics for GO:0030622 based on MANUAL annotations
The top 56 of 56 co-occurring terms
Co-occurring Term PR S% #Together #Compared
U4atac snRNA binding
71,766.61 100.00 18 18
U4atac snRNP
67,281.20 78.95 15 16
ribonucleoprotein complex localization
57,413.29 21.05 4 5
SMN-Gemin2 complex
35,883.31 14.29 3 6
box C/D sno(s)RNA binding
30,757.12 13.64 3 7
dense fibrillar component
13,048.48 7.41 2 11
U4 snRNA binding
4,613.57 6.04 9 140
U2-type precatalytic spliceosome
3,282.01 4.53 15 328
MLL1 complex
2,233.98 3.00 8 257
snRNP binding
2,021.59 2.56 4 142
Totals 274 881784

Change Log

Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA).
2021-05-24 Added DEFINITION Binding to a U4atac small nuclear RNA (U4atac snRNA).
2009-07-03 Deleted DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA).
2008-05-13 Added DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2008-05-12 Deleted DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2008-04-01 Updated RELATION is a GO:0017069 (snRNA binding)
2003-06-10 Updated TERM U4atac snRNA binding
2003-03-26 Added DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2003-03-19 Updated TERM U4atac snRNA binding activity
Timestamp Action Category Detail
2003-06-10 Updated TERM U4atac snRNA binding
2003-03-19 Updated TERM U4atac snRNA binding activity
2002-05-10 Added TERM U4atac snRNA binding
Timestamp Action Category Detail
2021-05-24 Deleted DEFINITION Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA).
2021-05-24 Added DEFINITION Binding to a U4atac small nuclear RNA (U4atac snRNA).
2009-07-03 Deleted DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with the U4atac small nuclear RNA (U4atac snRNA).
2008-05-13 Added DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2008-05-12 Deleted DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
2003-03-26 Added DEFINITION Interacting selectively with the U4atac small nuclear RNA (U4atac snRNA).
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0017069 (snRNA binding)
Timestamp Action Category Detail
Timestamp Action Category Detail
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