GO:0031120
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snRNA pseudouridine synthesis
Biological Process
Definition (GO:0031120 GONUTS page)
The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
Ancestor Chart
Ancestor chart for GO:0031120
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0031120
Child Term | Relationship to GO:0031120 |
---|---|
regulation of snRNA pseudouridine synthesis
|
regulates |
positive regulation of snRNA pseudouridine synthesis
|
positively_regulates |
negative regulation of snRNA pseudouridine synthesis
|
negatively_regulates |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q9SB36 | 3702 | PP337_ARATH | GO:0009451 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0031120 based on ALL annotations
The top 100 of 222 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
snRNA pseudouridine synthesis
|
13,283.83 | 100.00 | 14,917 | 14,917 |
rRNA pseudouridine synthesis
|
13,152.15 | 72.45 | 10,887 | 10,996 |
box H/ACA snoRNP complex
|
9,718.06 | 60.71 | 11,651 | 15,926 |
box H/ACA sno(s)RNA 3'-end processing
|
13,120.24 | 52.88 | 7,940 | 8,039 |
positive regulation of telomerase RNA localization to Cajal body
|
12,032.13 | 17.96 | 2,730 | 3,014 |
mRNA pseudouridine synthesis
|
1,678.51 | 11.44 | 8,156 | 64,547 |
telomerase RNA binding
|
1,810.74 | 8.66 | 2,859 | 20,974 |
snoRNA binding
|
660.25 | 4.08 | 2,757 | 55,469 |
Cajal body
|
576.88 | 2.75 | 1,036 | 23,856 |
tRNA pseudouridine(55) synthase activity
|
504.46 | 2.73 | 1,328 | 34,970 |
Totals | 146404 | 45399666 |
No co-occurrence statistics for GO:0031120 based on MANUAL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
snRNA pseudouridine synthesis
|
3,647.37 | 100.00 | 387 | 387 |
rRNA pseudouridine synthesis
|
3,544.76 | 95.48 | 380 | 391 |
box H/ACA snoRNP complex
|
2,580.69 | 69.19 | 375 | 530 |
box H/ACA sno(s)RNA 3'-end processing
|
3,432.82 | 36.36 | 144 | 153 |
box H/ACA snoRNA binding
|
1,717.87 | 25.46 | 138 | 293 |
mRNA pseudouridine synthesis
|
929.23 | 17.99 | 147 | 577 |
telomerase RNA binding
|
767.13 | 13.75 | 110 | 523 |
pseudouridine synthase activity
|
321.89 | 7.72 | 148 | 1,677 |
sno(s)RNA-containing ribonucleoprotein complex
|
141.65 | 1.75 | 12 | 309 |
snoRNA guided rRNA pseudouridine synthesis
|
185.46 | 1.62 | 9 | 177 |
Totals | 2014 | 673535 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2008-05-12 | Deleted | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2008-04-01 | Updated | RELATION | is a GO:0040031 (snRNA modification) |
2008-04-01 | Updated | RELATION | is a GO:0001522 (pseudouridine synthesis) |
2005-01-11 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2005-01-10 | Added | TERM | snRNA pseudouridine synthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-01-10 | Added | TERM | snRNA pseudouridine synthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2008-05-12 | Deleted | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2005-01-11 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0040031 (snRNA modification) |
2008-04-01 | Updated | RELATION | is a GO:0001522 (pseudouridine synthesis) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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