GO:0031120
JSON
snRNA pseudouridine synthesis
Biological Process
Definition (GO:0031120 GONUTS page)
The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
Ancestor Chart
Ancestor chart for GO:0031120
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0031120
Child Term | Relationship to GO:0031120 |
---|---|
negative regulation of snRNA pseudouridine synthesis
|
negatively_regulates |
regulation of snRNA pseudouridine synthesis
|
regulates |
positive regulation of snRNA pseudouridine synthesis
|
positively_regulates |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q9SB36 | 3702 | PP337_ARATH | GO:0009451 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0031120 based on ALL annotations
The top 100 of 207 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
snRNA pseudouridine synthesis
|
14,829.88 | 100.00 | 13,145 | 13,145 |
rRNA pseudouridine synthesis
|
14,674.41 | 79.74 | 10,571 | 10,683 |
box H/ACA sno(s)RNA 3'-end processing
|
14,641.75 | 58.18 | 7,705 | 7,804 |
box H/ACA snoRNP complex
|
10,513.57 | 57.52 | 9,899 | 13,963 |
positive regulation of telomerase RNA localization to Cajal body
|
13,396.19 | 19.83 | 2,663 | 2,948 |
mRNA pseudouridine synthesis
|
1,857.08 | 11.57 | 7,921 | 63,254 |
telomerase RNA binding
|
2,037.87 | 9.10 | 2,789 | 20,296 |
snoRNA binding
|
740.47 | 4.18 | 2,686 | 53,794 |
Cajal body
|
643.78 | 2.85 | 1,010 | 23,266 |
tRNA pseudouridine(55) synthase activity
|
557.90 | 2.82 | 1,329 | 35,327 |
Totals | 133201 | 34510300 |
No co-occurrence statistics for GO:0031120 based on MANUAL annotations
The top 66 of 66 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
snRNA pseudouridine synthesis
|
3,649.15 | 100.00 | 354 | 354 |
rRNA pseudouridine synthesis
|
3,537.34 | 95.34 | 348 | 359 |
box H/ACA snoRNP complex
|
2,591.43 | 69.43 | 343 | 483 |
box H/ACA sno(s)RNA 3'-end processing
|
3,411.16 | 35.54 | 129 | 138 |
box H/ACA snoRNA binding
|
1,736.40 | 25.86 | 128 | 269 |
mRNA pseudouridine synthesis
|
895.33 | 17.37 | 132 | 538 |
telomerase RNA binding
|
808.36 | 14.52 | 105 | 474 |
pseudouridine synthase activity
|
307.76 | 7.40 | 133 | 1,577 |
box H/ACA telomerase RNP complex
|
2,432.77 | 2.23 | 8 | 12 |
snoRNA guided rRNA pseudouridine synthesis
|
258.97 | 2.21 | 11 | 155 |
Totals | 1867 | 634673 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2008-05-12 | Deleted | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2008-04-01 | Updated | RELATION | is a GO:0001522 (pseudouridine synthesis) |
2008-04-01 | Updated | RELATION | is a GO:0040031 (snRNA modification) |
2005-01-11 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2005-01-10 | Added | TERM | snRNA pseudouridine synthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-01-10 | Added | TERM | snRNA pseudouridine synthesis |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2008-05-12 | Deleted | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
2005-01-11 | Added | DEFINITION | The intramolecular conversion of uridine to pseudouridine in an snRNA molecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0001522 (pseudouridine synthesis) |
2008-04-01 | Updated | RELATION | is a GO:0040031 (snRNA modification) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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