This term is obsolete.

GO:0031120 JSON

snRNA pseudouridine synthesis

Biological Process

Definition (GO:0031120 GONUTS page)

The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.

15,033 annotations

Ancestor Chart

Ancestor chart for GO:0031120
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0031120

Child Term Relationship to
GO:0031120
regulation of snRNA pseudouridine synthesis
regulates
positive regulation of snRNA pseudouridine synthesis
positively_regulates
negative regulation of snRNA pseudouridine synthesis
negatively_regulates

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein Q9SB36 3702 PP337_ARATH GO:0009451 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:21288264

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0031120 based on ALL annotations
The top 100 of 222 co-occurring terms
Co-occurring Term PR S% #Together #Compared
snRNA pseudouridine synthesis
13,283.83 100.00 14,917 14,917
rRNA pseudouridine synthesis
13,152.15 72.45 10,887 10,996
box H/ACA snoRNP complex
9,718.06 60.71 11,651 15,926
box H/ACA sno(s)RNA 3'-end processing
13,120.24 52.88 7,940 8,039
positive regulation of telomerase RNA localization to Cajal body
12,032.13 17.96 2,730 3,014
mRNA pseudouridine synthesis
1,678.51 11.44 8,156 64,547
telomerase RNA binding
1,810.74 8.66 2,859 20,974
snoRNA binding
660.25 4.08 2,757 55,469
Cajal body
576.88 2.75 1,036 23,856
tRNA pseudouridine(55) synthase activity
504.46 2.73 1,328 34,970
Totals 146404 45399666
No co-occurrence statistics for GO:0031120 based on MANUAL annotations
The top 65 of 65 co-occurring terms
Co-occurring Term PR S% #Together #Compared
snRNA pseudouridine synthesis
3,647.37 100.00 387 387
rRNA pseudouridine synthesis
3,544.76 95.48 380 391
box H/ACA snoRNP complex
2,580.69 69.19 375 530
box H/ACA sno(s)RNA 3'-end processing
3,432.82 36.36 144 153
box H/ACA snoRNA binding
1,717.87 25.46 138 293
mRNA pseudouridine synthesis
929.23 17.99 147 577
telomerase RNA binding
767.13 13.75 110 523
pseudouridine synthase activity
321.89 7.72 148 1,677
sno(s)RNA-containing ribonucleoprotein complex
141.65 1.75 12 309
snoRNA guided rRNA pseudouridine synthesis
185.46 1.62 9 177
Totals 2014 673535

Change Log

Timestamp Action Category Detail
2008-05-13 Added DEFINITION The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
2008-05-12 Deleted DEFINITION The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
2008-04-01 Updated RELATION is a GO:0040031 (snRNA modification)
2008-04-01 Updated RELATION is a GO:0001522 (pseudouridine synthesis)
2005-01-11 Added DEFINITION The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
2005-01-10 Added TERM snRNA pseudouridine synthesis
Timestamp Action Category Detail
2005-01-10 Added TERM snRNA pseudouridine synthesis
Timestamp Action Category Detail
2008-05-13 Added DEFINITION The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
2008-05-12 Deleted DEFINITION The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
2005-01-11 Added DEFINITION The intramolecular conversion of uridine to pseudouridine in an snRNA molecule.
Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0040031 (snRNA modification)
2008-04-01 Updated RELATION is a GO:0001522 (pseudouridine synthesis)
Timestamp Action Category Detail
Timestamp Action Category Detail
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