GO:0031390
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Ctf18 RFC-like complex
Cellular Component
Definition (GO:0031390 GONUTS page)
A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. PMID:14614842
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
Ctf18-RFC | exact |
Ctf18-RLC | exact |
RFC (Ctf18) | exact |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0031390 | Ctf18 RFC-like complex | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A096MK97 | 10116 | A0A096MK97_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2JW23 | 10116 | A0A0G2JW23_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K8T1 | 10116 | A0A0G2K8T1_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A1B0GR71 | 10090 | A0A1B0GR71_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1B0GRK6 | 10090 | A0A1B0GRK6_MOUSE | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636 | |
NOT-qualified manual | protein | A0A1D8PHF8 | 237561 | A0A1D8PHF8_CANAL | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936 | |
NOT-qualified manual | protein | A0A1W2Q633 | 10116 | A0A1W2Q633_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y7L4 | 10116 | A0A8I5Y7L4_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I5Y8H4 | 10116 | A0A8I5Y8H4_RAT | GO:0005634 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR018607 | Chromosome transmission fidelity protein 8 |
InterPro | IPR019128 | Sister chromatid cohesion protein Dcc1 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0031390 based on ALL annotations
The top 100 of 384 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Ctf18 RFC-like complex
|
15,930.28 | 100.00 | 12,237 | 12,237 |
Rad17 RFC-like complex
|
13,351.70 | 36.06 | 4,743 | 5,659 |
Elg1 RFC-like complex
|
11,432.34 | 34.27 | 4,847 | 6,754 |
DNA clamp unloading
|
8,227.53 | 27.92 | 4,625 | 8,955 |
maintenance of mitotic sister chromatid cohesion
|
14,150.78 | 24.99 | 3,157 | 3,554 |
mitotic sister chromatid cohesion
|
3,063.43 | 16.77 | 6,940 | 36,089 |
DNA replication factor C complex
|
2,823.08 | 14.24 | 5,141 | 29,010 |
DNA strand elongation involved in DNA replication
|
842.64 | 4.87 | 4,622 | 87,380 |
UV-damage excision repair
|
1,002.26 | 2.74 | 568 | 9,028 |
chromosome, centromeric region
|
451.60 | 2.62 | 3,155 | 111,294 |
Totals | 110747 | 76274592 |
No co-occurrence statistics for GO:0031390 based on MANUAL annotations
The top 90 of 90 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
Ctf18 RFC-like complex
|
7,298.30 | 100.00 | 177 | 177 |
maintenance of mitotic sister chromatid cohesion
|
3,176.11 | 31.44 | 94 | 216 |
Rad17 RFC-like complex
|
6,860.40 | 26.11 | 47 | 50 |
Elg1 RFC-like complex
|
5,029.91 | 25.50 | 51 | 74 |
chromosome, centromeric region
|
1,133.12 | 13.62 | 93 | 599 |
positive regulation of DNA-directed DNA polymerase activity
|
5,546.71 | 10.38 | 19 | 25 |
DNA clamp loader activity
|
720.28 | 8.88 | 83 | 841 |
DNA replication factor C complex
|
705.94 | 8.29 | 65 | 672 |
DNA-templated DNA replication
|
275.65 | 3.55 | 65 | 1,721 |
single-stranded DNA helicase activity
|
245.39 | 2.90 | 31 | 922 |
Totals | 1252 | 892916 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2022-06-22 | Added | RELATION | is a GO:0140513 (nuclear protein-containing complex) |
2022-06-22 | Deleted | RELATION | is a GO:0032991 (protein-containing complex) |
2019-09-12 | Deleted | RELATION | is a GO:0044427 (obsolete chromosomal part) |
2019-09-12 | Added | RELATION | part of GO:0005694 (chromosome) |
2018-02-18 | Deleted | RELATION | is a GO:0043234 (protein complex) |
2018-02-18 | Added | RELATION | is a GO:0032991 (protein-containing complex) |
2008-05-13 | Added | DEFINITION | A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. |
2008-05-12 | Deleted | DEFINITION | A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. |
2008-04-01 | Updated | RELATION | is a GO:0044427 (obsolete chromosomal part) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-04-30 | Added | TERM | Ctf18 RFC-like complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. |
2008-05-12 | Deleted | DEFINITION | A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. |
2007-08-09 | Deleted | SYNONYM | Ctf18-RFC |
2007-08-09 | Deleted | SYNONYM | Ctf18-RLC |
2007-08-09 | Deleted | SYNONYM | RFC (Ctf18) |
2007-08-09 | Added | SYNONYM | Ctf18-RFC |
2007-08-09 | Added | SYNONYM | Ctf18-RLC |
2007-08-09 | Added | SYNONYM | RFC (Ctf18) |
2005-04-30 | Added | DEFINITION | A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. |
2005-04-30 | Added | SYNONYM | RFC (Ctf18) |
2005-04-30 | Added | SYNONYM | Ctf18-RLC |
2005-04-30 | Added | SYNONYM | Ctf18-RFC |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-06-22 | Added | RELATION | is a GO:0140513 (nuclear protein-containing complex) |
2022-06-22 | Deleted | RELATION | is a GO:0032991 (protein-containing complex) |
2019-09-12 | Deleted | RELATION | is a GO:0044427 (obsolete chromosomal part) |
2019-09-12 | Added | RELATION | part of GO:0005694 (chromosome) |
2018-02-18 | Deleted | RELATION | is a GO:0043234 (protein complex) |
2018-02-18 | Added | RELATION | is a GO:0032991 (protein-containing complex) |
2008-04-01 | Updated | RELATION | is a GO:0044427 (obsolete chromosomal part) |
2008-04-01 | Updated | RELATION | is a GO:0043234 (protein complex) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
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