This term is obsolete.

GO:0031390 JSON

Ctf18 RFC-like complex

Cellular Component

Definition (GO:0031390 GONUTS page)

A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p. PMID:14614842

12,389 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
Ctf18-RFC exact
Ctf18-RLC exact
RFC (Ctf18) exact

Ancestor Chart

Ancestor chart for GO:0031390
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0031390 Ctf18 RFC-like complex Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A096MJ18 10116 A0A096MJ18_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A096MK97 10116 A0A096MK97_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2JW23 10116 A0A0G2JW23_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K8T1 10116 A0A0G2K8T1_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A1B0GR71 10090 A0A1B0GR71_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1B0GRK6 10090 A0A1B0GRK6_MOUSE GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:16904636
NOT-qualified manual protein A0A1D8PHF8 237561 A0A1D8PHF8_CANAL GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:8760936
NOT-qualified manual protein A0A1W2Q633 10116 A0A1W2Q633_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y7L4 10116 A0A8I5Y7L4_RAT GO:0005694 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I5Y8H4 10116 A0A8I5Y8H4_RAT GO:0005634 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Cross-references

Database ID Description
InterPro IPR018607 Chromosome transmission fidelity protein 8
InterPro IPR019128 Sister chromatid cohesion protein Dcc1

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0031390 based on ALL annotations
The top 100 of 384 co-occurring terms
Co-occurring Term PR S% #Together #Compared
Ctf18 RFC-like complex
15,930.28 100.00 12,237 12,237
Rad17 RFC-like complex
13,351.70 36.06 4,743 5,659
Elg1 RFC-like complex
11,432.34 34.27 4,847 6,754
DNA clamp unloading
8,227.53 27.92 4,625 8,955
maintenance of mitotic sister chromatid cohesion
14,150.78 24.99 3,157 3,554
mitotic sister chromatid cohesion
3,063.43 16.77 6,940 36,089
DNA replication factor C complex
2,823.08 14.24 5,141 29,010
DNA strand elongation involved in DNA replication
842.64 4.87 4,622 87,380
UV-damage excision repair
1,002.26 2.74 568 9,028
chromosome, centromeric region
451.60 2.62 3,155 111,294
Totals 110747 76274592
No co-occurrence statistics for GO:0031390 based on MANUAL annotations
The top 90 of 90 co-occurring terms
Co-occurring Term PR S% #Together #Compared
Ctf18 RFC-like complex
7,298.30 100.00 177 177
maintenance of mitotic sister chromatid cohesion
3,176.11 31.44 94 216
Rad17 RFC-like complex
6,860.40 26.11 47 50
Elg1 RFC-like complex
5,029.91 25.50 51 74
chromosome, centromeric region
1,133.12 13.62 93 599
positive regulation of DNA-directed DNA polymerase activity
5,546.71 10.38 19 25
DNA clamp loader activity
720.28 8.88 83 841
DNA replication factor C complex
705.94 8.29 65 672
DNA-templated DNA replication
275.65 3.55 65 1,721
single-stranded DNA helicase activity
245.39 2.90 31 922
Totals 1252 892916

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2022-06-22 Added RELATION is a GO:0140513 (nuclear protein-containing complex)
2022-06-22 Deleted RELATION is a GO:0032991 (protein-containing complex)
2019-09-12 Deleted RELATION is a GO:0044427 (obsolete chromosomal part)
2019-09-12 Added RELATION part of GO:0005694 (chromosome)
2018-02-18 Deleted RELATION is a GO:0043234 (protein complex)
2018-02-18 Added RELATION is a GO:0032991 (protein-containing complex)
2008-05-13 Added DEFINITION A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.
2008-05-12 Deleted DEFINITION A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.
2008-04-01 Updated RELATION is a GO:0044427 (obsolete chromosomal part)
Timestamp Action Category Detail
2005-04-30 Added TERM Ctf18 RFC-like complex
Timestamp Action Category Detail
2008-05-13 Added DEFINITION A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.
2008-05-12 Deleted DEFINITION A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.
2007-08-09 Deleted SYNONYM Ctf18-RFC
2007-08-09 Deleted SYNONYM Ctf18-RLC
2007-08-09 Deleted SYNONYM RFC (Ctf18)
2007-08-09 Added SYNONYM Ctf18-RFC
2007-08-09 Added SYNONYM Ctf18-RLC
2007-08-09 Added SYNONYM RFC (Ctf18)
2005-04-30 Added DEFINITION A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.
2005-04-30 Added SYNONYM RFC (Ctf18)
2005-04-30 Added SYNONYM Ctf18-RLC
2005-04-30 Added SYNONYM Ctf18-RFC
Timestamp Action Category Detail
2022-06-22 Added RELATION is a GO:0140513 (nuclear protein-containing complex)
2022-06-22 Deleted RELATION is a GO:0032991 (protein-containing complex)
2019-09-12 Deleted RELATION is a GO:0044427 (obsolete chromosomal part)
2019-09-12 Added RELATION part of GO:0005694 (chromosome)
2018-02-18 Deleted RELATION is a GO:0043234 (protein complex)
2018-02-18 Added RELATION is a GO:0032991 (protein-containing complex)
2008-04-01 Updated RELATION is a GO:0044427 (obsolete chromosomal part)
2008-04-01 Updated RELATION is a GO:0043234 (protein complex)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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