GO:0031934
JSON
mating-type region heterochromatin
Cellular Component
Definition (GO:0031934 GONUTS page)
Heterochromatic regions of the chromosome found at silenced mating-type loci.
Ancestor Chart
Ancestor chart for GO:0031934
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0031934 | mating-type region heterochromatin | Only in Taxon | 131567 | cellular organisms |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A8I5Y7L4 | 10116 | A0A8I5Y7L4_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O42131 | 9031 | TOP2B_CHICK | GO:0000792 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:11453553 | |
NOT-qualified manual | protein | Q14TE9 | 10116 | Q14TE9_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q63177 | 10116 | Q63177_RAT | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q64511 | 10090 | TOP2B_MOUSE | GO:0005694 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:11835579 | |
NOT-qualified manual | protein | Q8NFT6 | 9606 | DBF4B_HUMAN | GO:0000785 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15668232 | |
NOT-qualified manual | protein | Q9URY0 | 284812 | YTM1_SCHPO | GO:0000785 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:36423630 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0031934 based on ALL annotations
The top 100 of 335 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mating-type region heterochromatin
|
55,348.89 | 100.00 | 3,522 | 3,522 |
SHREC complex
|
55,253.70 | 65.85 | 2,322 | 2,326 |
silent mating-type cassette heterochromatin formation
|
22,316.91 | 34.04 | 2,416 | 5,992 |
rDNA heterochromatin
|
19,809.56 | 31.70 | 2,588 | 7,231 |
pericentric heterochromatin formation
|
16,172.89 | 17.55 | 1,075 | 3,679 |
siRNA-independent facultative heterochromatin formation
|
49,161.85 | 8.26 | 294 | 331 |
chromosome, subtelomeric region
|
23,290.38 | 6.58 | 255 | 606 |
subtelomeric heterochromatin
|
51,950.27 | 6.05 | 214 | 228 |
heterochromatin formation
|
3,383.34 | 5.95 | 2,419 | 39,573 |
heterochromatin island
|
36,158.58 | 4.95 | 179 | 274 |
Totals | 27135 | 2782751 |
No co-occurrence statistics for GO:0031934 based on MANUAL annotations
The top 100 of 198 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mating-type region heterochromatin
|
20,835.47 | 100.00 | 62 | 62 |
subtelomeric heterochromatin
|
20,002.05 | 38.10 | 24 | 25 |
SHREC complex
|
20,835.47 | 25.81 | 16 | 16 |
silent mating-type cassette heterochromatin formation
|
6,871.27 | 24.80 | 31 | 94 |
pericentric heterochromatin formation
|
6,705.67 | 23.14 | 28 | 87 |
rDNA heterochromatin
|
3,704.08 | 13.87 | 24 | 135 |
chromosome, subtelomeric region
|
7,813.30 | 11.69 | 9 | 24 |
siRNA-mediated pericentric heterochromatin formation
|
6,945.16 | 11.25 | 9 | 27 |
heterochromatin boundary formation
|
5,068.09 | 10.00 | 9 | 37 |
heterochromatin island
|
9,723.22 | 10.00 | 7 | 15 |
Totals | 478 | 13348 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
2008-05-13 | Added | DEFINITION | Heterochromatic regions of the chromosome found at silenced mating-type loci. |
2008-05-12 | Deleted | DEFINITION | Heterochromatic regions of the chromosome found at silenced mating-type loci. |
2008-04-01 | Updated | RELATION | is a GO:0000792 (heterochromatin) |
2005-11-28 | Added | TERM | mating-type region heterochromatin |
2005-11-28 | Added | DEFINITION | Heterochromatic regions of the chromosome found at silenced mating-type loci. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2005-11-28 | Added | TERM | mating-type region heterochromatin |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | Heterochromatic regions of the chromosome found at silenced mating-type loci. |
2008-05-12 | Deleted | DEFINITION | Heterochromatic regions of the chromosome found at silenced mating-type loci. |
2005-11-28 | Added | DEFINITION | Heterochromatic regions of the chromosome found at silenced mating-type loci. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0000792 (heterochromatin) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:131567 (cellular organisms) |
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