GO:0032494
JSON
response to peptidoglycan
Biological Process
Definition (GO:0032494 GONUTS page)
Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0032494
Child Term | Relationship to GO:0032494 |
---|---|
cellular response to peptidoglycan
|
is_a |
detection of peptidoglycan
|
is_a |
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Response to guidelines | Link |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0032494 | response to peptidoglycan | Never in Taxon | 4895 | Schizosaccharomyces |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | P0C5B6 | 3702 | 4CLL4_ARATH | GO:0009617 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:18267944 | |
NOT-qualified manual | protein | Q84P23 | 3702 | 4CLL9_ARATH | GO:0009617 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:18267944 | |
NOT-qualified manual | protein | Q84P24 | 3702 | 4CLL6_ARATH | GO:0009617 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:18267944 | |
NOT-qualified manual | protein | Q9FLV0 | 3702 | DMR6_ARATH | GO:0009617 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:15986928 | |
NOT-qualified manual | protein | Q9M0X9 | 3702 | 4CLL7_ARATH | GO:0009617 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:18267944 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_primary_input | CHEBI | CHEBI:8005 | peptidoglycan |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0032494 based on ALL annotations
The top 100 of 467 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
response to peptidoglycan
|
340,802.06 | 100.00 | 572 | 572 |
response to muramyl dipeptide
|
111,584.11 | 26.48 | 332 | 1,014 |
muramyl dipeptide binding
|
329,442.00 | 15.13 | 87 | 90 |
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
|
285,094.00 | 14.77 | 87 | 104 |
host-mediated regulation of intestinal microbiota composition
|
76,752.88 | 14.21 | 159 | 706 |
regulation of interleukin-2 production
|
192,247.33 | 13.75 | 88 | 156 |
regulation of chemokine (C-X-C motif) ligand 1 production
|
340,802.10 | 12.59 | 72 | 72 |
nucleotide-binding oligomerization domain containing 2 signaling pathway
|
65,538.86 | 12.48 | 150 | 780 |
biosynthetic process of antibacterial peptides active against Gram-positive bacteria
|
340,802.06 | 12.41 | 71 | 71 |
detection of muramyl dipeptide
|
331,465.03 | 12.37 | 71 | 73 |
Totals | 11117 | 155182 |
No co-occurrence statistics for GO:0032494 based on MANUAL annotations
The top 100 of 404 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
response to peptidoglycan
|
33,123.05 | 100.00 | 39 | 39 |
response to muramyl dipeptide
|
8,767.87 | 20.22 | 18 | 68 |
toll-like receptor 2 signaling pathway
|
6,624.61 | 13.79 | 12 | 60 |
positive regulation of cytokine production involved in immune response
|
5,247.22 | 12.90 | 16 | 101 |
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
|
18,401.70 | 11.63 | 5 | 9 |
cellular response to peptidoglycan
|
6,973.27 | 11.59 | 8 | 38 |
positive regulation of xenophagy
|
6,973.27 | 11.59 | 8 | 38 |
muramyl dipeptide binding
|
16,561.53 | 11.36 | 5 | 10 |
nucleotide-binding oligomerization domain containing 2 signaling pathway
|
6,022.37 | 10.67 | 8 | 44 |
positive regulation of macrophage tolerance induction
|
33,123.05 | 10.26 | 4 | 4 |
Totals | 586 | 5696 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
2024-07-13 | Added | RELATION | is a GO:1901698 (response to nitrogen compound) |
2024-07-13 | Deleted | RELATION | is a GO:0010243 (obsolete response to organonitrogen compound) |
2012-12-15 | Added | RELATION | is a GO:1901700 (response to oxygen-containing compound) |
2012-11-02 | Added | RELATION | is a GO:0010243 (obsolete response to organonitrogen compound) |
2011-05-08 | Added | DEFINITION | Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2011-05-08 | Deleted | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2008-05-13 | Added | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2008-05-12 | Deleted | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2008-04-01 | Updated | RELATION | is a GO:0002237 (response to molecule of bacterial origin) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2006-12-08 | Added | TERM | response to peptidoglycan |
Timestamp | Action | Category | Detail |
---|---|---|---|
2011-05-08 | Added | DEFINITION | Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2011-05-08 | Deleted | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2008-05-13 | Added | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2008-05-12 | Deleted | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2008-01-27 | Updated | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule. |
2006-12-19 | Updated | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of peptidoglycan. Peptidoglycan is a bacterial cell wall macromolecule. |
2006-12-12 | Added | DEFINITION | A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of peptidoglycan. Peptidoglycan is a bacterial cell wall macromolecule. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-07-13 | Added | RELATION | is a GO:1901698 (response to nitrogen compound) |
2024-07-13 | Deleted | RELATION | is a GO:0010243 (obsolete response to organonitrogen compound) |
2012-12-15 | Added | RELATION | is a GO:1901700 (response to oxygen-containing compound) |
2012-11-02 | Added | RELATION | is a GO:0010243 (obsolete response to organonitrogen compound) |
2008-04-01 | Updated | RELATION | is a GO:0002237 (response to molecule of bacterial origin) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4895 (Schizosaccharomyces) |
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