GO:0033387
JSON
putrescine biosynthetic process from arginine, via ornithine
Biological Process
Definition (GO:0033387 GONUTS page)
The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine, via decarboxylation of ornithine.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
putrescine formation from ornithine | exact |
putrescine biosynthesis from ornithine | exact |
putrescine anabolism from ornithine | exact |
putrescine synthesis from ornithine | exact |
putrescine biosynthetic process from ornithine | exact |
Ancestor Chart
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A0G2K1J8 | 10116 | A0A0G2K1J8_RAT | GO:0006596 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A2K5ATM2 | 6239 | A0A2K5ATM2_CAEEL | GO:0033387 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A2K5ATM9 | 6239 | A0A2K5ATM9_CAEEL | GO:0033387 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A2K5ATP6 | 6239 | A0A2K5ATP6_CAEEL | GO:0033387 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A6HFS2 | 10116 | A6HFS2_RAT | GO:0006596 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6HFS3 | 10116 | A6HFS3_RAT | GO:0006596 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A8XEC6 | 6238 | A8XEC6_CAEBR | GO:0033387 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | O01579 | 6239 | O01579_CAEEL | GO:0033387 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | O17731 | 6239 | SAT_CAEEL | GO:0006596 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15283700 | |
NOT-qualified manual | protein | Q6P8J2 | 10090 | SAT2_MOUSE | GO:0006596 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 |
Cross-references
Database | ID | Description |
---|---|---|
MetaCyc | PWY-46 |
Cross-Ontology Relations
Relation | Other Ontology | ID | Term |
---|---|---|---|
has_intermediate | CHEBI | CHEBI:46912 | ornithinium(1+) |
has_primary_input | CHEBI | CHEBI:32682 | L-argininium(1+) |
has_primary_output | CHEBI | CHEBI:326268 | 1,4-butanediammonium |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0033387 based on ALL annotations
The top 100 of 188 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
putrescine biosynthetic process from arginine, via ornithine
|
9,285.61 | 100.00 | 21,340 | 21,340 |
ornithine decarboxylase activity
|
7,947.32 | 82.83 | 20,541 | 24,000 |
polyamine biosynthetic process
|
2,057.87 | 22.13 | 21,195 | 95,637 |
ornithine decarboxylase activator activity
|
9,083.20 | 6.72 | 1,436 | 1,468 |
positive regulation of polyamine transmembrane transport
|
8,496.10 | 6.72 | 1,442 | 1,576 |
negative regulation of protein catabolic process
|
2,189.57 | 5.55 | 1,445 | 6,128 |
carboxy-lyase activity
|
112.97 | 1.19 | 8,279 | 680,500 |
catalytic activity
|
42.14 | 0.45 | 21,126 | 4,655,290 |
granular vesicle
|
8,622.35 | 0.43 | 91 | 98 |
trans-Golgi network membrane organization
|
3,580.47 | 0.42 | 91 | 236 |
Totals | 133926 | 79824610 |
No co-occurrence statistics for GO:0033387 based on MANUAL annotations
The top 51 of 51 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
putrescine biosynthetic process from arginine, via ornithine
|
5,471.06 | 100.00 | 258 | 258 |
ornithine decarboxylase activity
|
5,286.64 | 96.63 | 258 | 267 |
positive regulation of polyamine transmembrane transport
|
5,136.10 | 17.62 | 46 | 49 |
ornithine decarboxylase activator activity
|
5,039.13 | 13.41 | 35 | 38 |
negative regulation of protein catabolic process
|
1,075.10 | 10.18 | 45 | 229 |
regulation of protein catabolic process
|
415.52 | 1.81 | 6 | 79 |
granular vesicle
|
4,103.29 | 1.16 | 3 | 4 |
putrescine biosynthetic process
|
1,172.37 | 1.12 | 3 | 14 |
trans-Golgi network membrane organization
|
863.85 | 1.09 | 3 | 19 |
positive regulation of catalytic activity
|
334.96 | 0.99 | 3 | 49 |
Totals | 1005 | 772680 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-11-19 | Deleted | RELATION | is a GO:0009446 (putrescine biosynthetic process) |
2024-11-19 | Added | SYNONYM | putrescine biosynthetic process from ornithine |
2024-11-19 | Added | XREF | MetaCyc:PWY-46 |
2024-11-19 | Deleted | RELATION | is a GO:0006591 (ornithine metabolic process) |
2024-11-19 | Updated | TERM | putrescine biosynthetic process from arginine, via ornithine |
2024-11-19 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine, via decarboxylation of ornithine. |
2024-11-19 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine. |
2024-11-19 | Added | RELATION | is a GO:0033388 (putrescine biosynthetic process from arginine) |
2019-03-05 | Added | RELATION | is a GO:0006591 (ornithine metabolic process) |
2019-02-28 | Deleted | RELATION | is a GO:0006591 (ornithine metabolic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-11-19 | Updated | TERM | putrescine biosynthetic process from arginine, via ornithine |
2007-07-11 | Added | TERM | putrescine biosynthetic process from ornithine |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-11-19 | Added | SYNONYM | putrescine biosynthetic process from ornithine |
2024-11-19 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine, via decarboxylation of ornithine. |
2024-11-19 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine. |
2008-05-13 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine. |
2008-05-12 | Deleted | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine. |
2007-08-09 | Deleted | SYNONYM | putrescine biosynthesis from ornithine |
2007-08-09 | Deleted | SYNONYM | putrescine formation from ornithine |
2007-08-09 | Deleted | SYNONYM | putrescine synthesis from ornithine |
2007-08-09 | Added | SYNONYM | putrescine biosynthesis from ornithine |
2007-08-09 | Added | SYNONYM | putrescine anabolism from ornithine |
2007-08-09 | Added | SYNONYM | putrescine synthesis from ornithine |
2007-08-09 | Deleted | SYNONYM | putrescine anabolism from ornithine |
2007-08-09 | Added | SYNONYM | putrescine formation from ornithine |
2007-07-27 | Added | DEFINITION | The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine. |
2007-07-11 | Added | SYNONYM | putrescine anabolism from ornithine |
2007-07-11 | Added | SYNONYM | putrescine formation from ornithine |
2007-07-11 | Added | SYNONYM | putrescine synthesis from ornithine |
2007-07-11 | Added | SYNONYM | putrescine biosynthesis from ornithine |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-11-19 | Deleted | RELATION | is a GO:0009446 (putrescine biosynthetic process) |
2024-11-19 | Deleted | RELATION | is a GO:0006591 (ornithine metabolic process) |
2024-11-19 | Added | RELATION | is a GO:0033388 (putrescine biosynthetic process from arginine) |
2019-03-05 | Added | RELATION | is a GO:0006591 (ornithine metabolic process) |
2019-02-28 | Deleted | RELATION | is a GO:0006591 (ornithine metabolic process) |
2017-08-13 | Deleted | RELATION | is a GO:0044711 (obsolete single-organism biosynthetic process) |
2013-11-28 | Added | RELATION | is a GO:0044711 (obsolete single-organism biosynthetic process) |
2012-04-13 | Added | RELATION | is a GO:0006591 (ornithine metabolic process) |
2008-04-01 | Updated | RELATION | is a GO:0009446 (putrescine biosynthetic process) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-11-19 | Added | XREF | MetaCyc:PWY-46 |
Timestamp | Action | Category | Detail |
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