This term is obsolete.

GO:0033387 JSON

putrescine biosynthetic process from arginine, via ornithine

Biological Process

Definition (GO:0033387 GONUTS page)

The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine, via decarboxylation of ornithine.

21,457 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
putrescine formation from ornithine exact
putrescine biosynthesis from ornithine exact
putrescine anabolism from ornithine exact
putrescine synthesis from ornithine exact
putrescine biosynthetic process from ornithine exact

Ancestor Chart

Ancestor chart for GO:0033387
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Ancestor chart

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A0G2K1J8 10116 A0A0G2K1J8_RAT GO:0006596 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A2K5ATM2 6239 A0A2K5ATM2_CAEEL GO:0033387 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2K5ATM9 6239 A0A2K5ATM9_CAEEL GO:0033387 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A2K5ATP6 6239 A0A2K5ATP6_CAEEL GO:0033387 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A6HFS2 10116 A6HFS2_RAT GO:0006596 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6HFS3 10116 A6HFS3_RAT GO:0006596 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A8XEC6 6238 A8XEC6_CAEBR GO:0033387 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein O01579 6239 O01579_CAEEL GO:0033387 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein O17731 6239 SAT_CAEEL GO:0006596 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15283700
NOT-qualified manual protein Q6P8J2 10090 SAT2_MOUSE GO:0006596 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024

Cross-references

Database ID Description
MetaCyc PWY-46

Cross-Ontology Relations

Relation Other Ontology ID Term
has_intermediate CHEBI CHEBI:46912 ornithinium(1+)
has_primary_input CHEBI CHEBI:32682 L-argininium(1+)
has_primary_output CHEBI CHEBI:326268 1,4-butanediammonium

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0033387 based on ALL annotations
The top 100 of 188 co-occurring terms
Co-occurring Term PR S% #Together #Compared
putrescine biosynthetic process from arginine, via ornithine
9,285.61 100.00 21,340 21,340
ornithine decarboxylase activity
7,947.32 82.83 20,541 24,000
polyamine biosynthetic process
2,057.87 22.13 21,195 95,637
ornithine decarboxylase activator activity
9,083.20 6.72 1,436 1,468
positive regulation of polyamine transmembrane transport
8,496.10 6.72 1,442 1,576
negative regulation of protein catabolic process
2,189.57 5.55 1,445 6,128
carboxy-lyase activity
112.97 1.19 8,279 680,500
catalytic activity
42.14 0.45 21,126 4,655,290
granular vesicle
8,622.35 0.43 91 98
trans-Golgi network membrane organization
3,580.47 0.42 91 236
Totals 133926 79824610
No co-occurrence statistics for GO:0033387 based on MANUAL annotations
The top 51 of 51 co-occurring terms
Co-occurring Term PR S% #Together #Compared
putrescine biosynthetic process from arginine, via ornithine
5,471.06 100.00 258 258
ornithine decarboxylase activity
5,286.64 96.63 258 267
positive regulation of polyamine transmembrane transport
5,136.10 17.62 46 49
ornithine decarboxylase activator activity
5,039.13 13.41 35 38
negative regulation of protein catabolic process
1,075.10 10.18 45 229
regulation of protein catabolic process
415.52 1.81 6 79
granular vesicle
4,103.29 1.16 3 4
putrescine biosynthetic process
1,172.37 1.12 3 14
trans-Golgi network membrane organization
863.85 1.09 3 19
positive regulation of catalytic activity
334.96 0.99 3 49
Totals 1005 772680

Change Log

Timestamp Action Category Detail
2024-11-19 Deleted RELATION is a GO:0009446 (putrescine biosynthetic process)
2024-11-19 Added SYNONYM putrescine biosynthetic process from ornithine
2024-11-19 Added XREF MetaCyc:PWY-46
2024-11-19 Deleted RELATION is a GO:0006591 (ornithine metabolic process)
2024-11-19 Updated TERM putrescine biosynthetic process from arginine, via ornithine
2024-11-19 Added DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine, via decarboxylation of ornithine.
2024-11-19 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.
2024-11-19 Added RELATION is a GO:0033388 (putrescine biosynthetic process from arginine)
2019-03-05 Added RELATION is a GO:0006591 (ornithine metabolic process)
2019-02-28 Deleted RELATION is a GO:0006591 (ornithine metabolic process)
Timestamp Action Category Detail
2024-11-19 Updated TERM putrescine biosynthetic process from arginine, via ornithine
2007-07-11 Added TERM putrescine biosynthetic process from ornithine
Timestamp Action Category Detail
2024-11-19 Added SYNONYM putrescine biosynthetic process from ornithine
2024-11-19 Added DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from arginine, via decarboxylation of ornithine.
2024-11-19 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.
2008-05-13 Added DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.
2007-08-09 Deleted SYNONYM putrescine biosynthesis from ornithine
2007-08-09 Deleted SYNONYM putrescine formation from ornithine
2007-08-09 Deleted SYNONYM putrescine synthesis from ornithine
2007-08-09 Added SYNONYM putrescine biosynthesis from ornithine
2007-08-09 Added SYNONYM putrescine anabolism from ornithine
2007-08-09 Added SYNONYM putrescine synthesis from ornithine
2007-08-09 Deleted SYNONYM putrescine anabolism from ornithine
2007-08-09 Added SYNONYM putrescine formation from ornithine
2007-07-27 Added DEFINITION The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.
2007-07-11 Added SYNONYM putrescine anabolism from ornithine
2007-07-11 Added SYNONYM putrescine formation from ornithine
2007-07-11 Added SYNONYM putrescine synthesis from ornithine
2007-07-11 Added SYNONYM putrescine biosynthesis from ornithine
Timestamp Action Category Detail
2024-11-19 Deleted RELATION is a GO:0009446 (putrescine biosynthetic process)
2024-11-19 Deleted RELATION is a GO:0006591 (ornithine metabolic process)
2024-11-19 Added RELATION is a GO:0033388 (putrescine biosynthetic process from arginine)
2019-03-05 Added RELATION is a GO:0006591 (ornithine metabolic process)
2019-02-28 Deleted RELATION is a GO:0006591 (ornithine metabolic process)
2017-08-13 Deleted RELATION is a GO:0044711 (obsolete single-organism biosynthetic process)
2013-11-28 Added RELATION is a GO:0044711 (obsolete single-organism biosynthetic process)
2012-04-13 Added RELATION is a GO:0006591 (ornithine metabolic process)
2008-04-01 Updated RELATION is a GO:0009446 (putrescine biosynthetic process)
Timestamp Action Category Detail
2024-11-19 Added XREF MetaCyc:PWY-46
Timestamp Action Category Detail
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