This term is obsolete.
Note that it is speculated that higher eukaryotic YTH-family protein may be involved in similar mechanisms to suppress gene regulation during gametogenesis or general silencing.

GO:0033621 JSON

nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts

Biological Process

Definition (GO:0033621 GONUTS page)

The chemical reactions and pathways resulting in the selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein. PMID:16823445

Comments

Note that it is speculated that higher eukaryotic YTH-family protein may be involved in similar mechanisms to suppress gene regulation during gametogenesis or general silencing.

496 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
degradation of meiosis-specific transcripts exact
mRNA degradation, meiosis-specific transcripts exact
mRNA catabolism, meiosis-specific transcripts exact
mRNA breakdown, meiosis-specific transcripts exact
nuclear mRNA catabolic process, meiosis-specific transcripts exact

Ancestor Chart

Ancestor chart for GO:0033621
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0033621

Child Term Relationship to
GO:0033621
positive regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
positively_regulates
negative regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
negatively_regulates
regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
regulates

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0033621 nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts Only in Taxon 2759 Eukaryota

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A287BGI5 9823 A0A287BGI5_PIG GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A5F5PJA1 9796 A0A5F5PJA1_HORSE GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A5F8G5N3 13616 A0A5F8G5N3_MONDO GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A8I3P920 9615 A0A8I3P920_CANLF GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A8I6A320 10116 A0A8I6A320_RAT GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein A0A8V0YQZ5 9031 A0A8V0YQZ5_CHICK GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein B0BNG7 10116 B0BNG7_RAT GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein F6T6P8 9258 F6T6P8_ORNAN GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein F7FHG5 10116 F7FHG5_RAT GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033
NOT-qualified manual protein G3S7K9 9595 G3S7K9_GORGO GO:0006402 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0033621 based on ALL annotations
The top 100 of 148 co-occurring terms
Co-occurring Term PR S% #Together #Compared
nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
401,935.66 100.00 485 485
nuclear exosome focus
396,429.70 87.98 432 438
Mei2 nuclear dot complex
360,839.97 68.44 360 401
sno(s)RNA 3'-end processing
164,075.19 23.15 169 414
protein-RNA adaptor activity
113,621.38 17.96 160 566
nucleolar peripheral inclusion body
58,665.75 11.99 195 1,336
heterochromatin island
92,415.86 9.05 63 274
lncRNA binding
31,171.31 6.71 161 2,076
siRNA catabolic process
137,806.50 6.50 36 105
co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway
28,365.05 6.38 194 2,749
Totals 6187 6308934
No co-occurrence statistics for GO:0033621 based on MANUAL annotations
The top 100 of 102 co-occurring terms
Co-occurring Term PR S% #Together #Compared
nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
86,119.94 100.00 15 15
nuclear exosome focus
76,551.06 50.00 8 9
MTREC complex
71,766.62 31.25 5 6
Mei2 nuclear dot complex
33,123.05 21.74 5 13
siRNA-independent facultative heterochromatin formation
43,059.97 21.05 4 8
heterochromatin island
28,706.65 20.00 5 15
nuclear mRNA surveillance of spliceosomal pre-mRNA splicing
31,316.34 18.18 4 11
cleavage body
17,223.99 12.90 4 20
regulation of siRNA-independent facultative heterochromatin formation
34,447.98 11.11 2 5
regulatory ncRNA 3'-end processing
28,706.65 10.53 2 6
Totals 220 430591

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
2024-02-24 Added RELATION is a GO:0071028 (nuclear mRNA surveillance)
2024-02-24 Deleted RELATION is a GO:0000956 (nuclear-transcribed mRNA catabolic process)
2009-03-15 Deleted DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2009-03-15 Added DEFINITION The chemical reactions and pathways resulting in the selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2008-05-13 Added DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2008-05-12 Deleted DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2008-04-30 Added RELATION is a GO:0000956 (nuclear-transcribed mRNA catabolic process)
2008-04-30 Updated TERM nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
2008-04-30 Deleted RELATION is a GO:0006402 (mRNA catabolic process)
Timestamp Action Category Detail
2008-04-30 Updated TERM nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts
2007-10-16 Added TERM mRNA catabolic process, meiosis-specific transcripts
Timestamp Action Category Detail
2009-03-15 Deleted DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2009-03-15 Added DEFINITION The chemical reactions and pathways resulting in the selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2008-05-13 Added DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2008-05-12 Deleted DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2008-04-30 Added SYNONYM nuclear mRNA catabolic process, meiosis-specific transcripts
2007-10-25 Added DEFINITION The selective degradation of meiosis-specific transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.
2007-10-16 Added SYNONYM mRNA degradation, meiosis-specific transcripts
2007-10-16 Added SYNONYM mRNA catabolism, meiosis-specific transcripts
2007-10-16 Added SYNONYM mRNA breakdown, meiosis-specific transcripts
2007-10-16 Added SYNONYM degradation of meiosis-specific transcripts
Timestamp Action Category Detail
2024-02-24 Added RELATION is a GO:0071028 (nuclear mRNA surveillance)
2024-02-24 Deleted RELATION is a GO:0000956 (nuclear-transcribed mRNA catabolic process)
2008-04-30 Added RELATION is a GO:0000956 (nuclear-transcribed mRNA catabolic process)
2008-04-30 Deleted RELATION is a GO:0006402 (mRNA catabolic process)
2008-04-01 Updated RELATION is a GO:0006402 (mRNA catabolic process)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT in_taxon NCBITaxon:2759 (Eukaryota)
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