GO:0034245
JSON
mitochondrial DNA-directed RNA polymerase complex
Cellular Component
Definition (GO:0034245 GONUTS page)
A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form. PMID:7929382
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
mitochondrial RNA polymerase complex | broad |
mitochondrial RNA polymerase holoenzyme complex | exact |
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0034245 | mitochondrial DNA-directed RNA polymerase complex | Only in Taxon | 2759 | Eukaryota |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A022QIQ6 | 4155 | A0A022QIQ6_ERYGU | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A022R2W9 | 4155 | A0A022R2W9_ERYGU | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A059C934 | 71139 | A0A059C934_EUCGR | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A061F5S0 | 3641 | A0A061F5S0_THECC | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A067G6Z9 | 2711 | A0A067G6Z9_CITSI | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A078G6B8 | 3708 | A0A078G6B8_BRANA | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A078III4 | 3708 | A0A078III4_BRANA | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A078J3J0 | 3708 | A0A078J3J0_BRANA | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A078J4R6 | 3708 | A0A078J4R6_BRANA | GO:0005739 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000318 from this reference: GO_REF:0000033 | |
NOT-qualified manual | protein | A0A096MJ18 | 10116 | A0A096MJ18_RAT | GO:0005737 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0034245 based on ALL annotations
The top 100 of 161 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mitochondrial DNA-directed RNA polymerase complex
|
27,896.22 | 100.00 | 6,988 | 6,988 |
mitochondrial promoter sequence-specific DNA binding
|
26,608.70 | 54.42 | 3,906 | 4,095 |
transcription initiation at mitochondrial promoter
|
6,166.46 | 8.87 | 901 | 4,076 |
mitochondrial transcription factor activity
|
5,385.05 | 7.62 | 782 | 4,051 |
mitochondrial transcription
|
1,178.65 | 4.20 | 6,222 | 147,262 |
mitochondrial single subunit type RNA polymerase activity
|
750.41 | 2.63 | 3,812 | 141,710 |
DNA-directed 5'-3' RNA polymerase activity
|
349.26 | 1.25 | 6,205 | 495,607 |
RNA polymerase IV activity
|
333.59 | 1.18 | 3,812 | 318,773 |
transcription by RNA polymerase IV
|
333.59 | 1.18 | 3,812 | 318,773 |
RNA polymerase V activity
|
333.59 | 1.18 | 3,812 | 318,773 |
Totals | 107859 | 55631495 |
No co-occurrence statistics for GO:0034245 based on MANUAL annotations
The top 37 of 37 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
mitochondrial DNA-directed RNA polymerase complex
|
6,426.86 | 100.00 | 201 | 201 |
mitochondrial transcription
|
4,136.10 | 63.11 | 195 | 303 |
mitochondrial promoter sequence-specific DNA binding
|
5,275.78 | 25.82 | 55 | 67 |
DNA-directed 5'-3' RNA polymerase activity
|
1,542.77 | 23.77 | 193 | 804 |
transcription initiation at mitochondrial promoter
|
827.22 | 4.50 | 13 | 101 |
mitochondrial transcription factor activity
|
612.08 | 2.89 | 8 | 84 |
DNA primase activity
|
241.01 | 1.69 | 6 | 160 |
mitochondrial single subunit type RNA polymerase activity
|
3,856.12 | 1.48 | 3 | 5 |
mitochondrial nucleoid
|
56.18 | 0.65 | 5 | 572 |
DNA synthesis involved in mitochondrial DNA replication
|
6,426.86 | 0.50 | 1 | 1 |
Totals | 755 | 704716 |
Change Log
- All changes
- All changes
- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
- Relationships
- Cross-references
- Cross-references
- Other
- Other
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-17 | Added | RELATION | part of GO:0005739 (mitochondrion) |
2024-09-11 | Deleted | RELATION | part of GO:0005739 (mitochondrion) |
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
2019-09-12 | Deleted | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2019-08-30 | Added | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2018-02-18 | Deleted | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2018-02-18 | Added | RELATION | is a GO:0098798 (mitochondrial protein-containing complex) |
2016-10-05 | Deleted | RELATION | is a GO:0098798 (mitochondrial protein-containing complex) |
2016-10-05 | Added | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2015-06-25 | Deleted | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-02-10 | Added | TERM | mitochondrial DNA-directed RNA polymerase complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form. |
2008-05-12 | Deleted | DEFINITION | A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form. |
2008-03-11 | Added | DEFINITION | A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form. |
2008-02-14 | Deleted | SYNONYM | itochondrial RNA polymerase holoenzyme complex |
2008-02-14 | Added | SYNONYM | mitochondrial RNA polymerase holoenzyme complex |
2008-02-10 | Added | SYNONYM | itochondrial RNA polymerase holoenzyme complex |
2008-02-10 | Added | SYNONYM | mitochondrial RNA polymerase complex |
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-17 | Added | RELATION | part of GO:0005739 (mitochondrion) |
2024-09-11 | Deleted | RELATION | part of GO:0005739 (mitochondrion) |
2019-09-12 | Deleted | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2019-08-30 | Added | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2018-02-18 | Deleted | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2018-02-18 | Added | RELATION | is a GO:0098798 (mitochondrial protein-containing complex) |
2016-10-05 | Deleted | RELATION | is a GO:0098798 (mitochondrial protein-containing complex) |
2016-10-05 | Added | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2015-06-25 | Deleted | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2015-05-11 | Added | RELATION | is a GO:0098798 (mitochondrial protein-containing complex) |
2015-04-24 | Added | RELATION | part of GO:0005739 (mitochondrion) |
2013-02-02 | Deleted | RELATION | part of GO:0005739 (mitochondrion) |
2012-10-29 | Added | RELATION | part of GO:0005739 (mitochondrion) |
2008-04-01 | Updated | RELATION | is a GO:0044429 (obsolete mitochondrial part) |
2008-04-01 | Updated | RELATION | is a GO:0000428 (DNA-directed RNA polymerase complex) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:2759 (Eukaryota) |
Not found :(
Sorry, but the Term you were trying to view does not exist.
Reported error:
It looks like this may have been caused by:
- a mistyped URL
- an out-of-date link