GO:0039020
JSON
pronephric nephron tubule development
Biological Process
Definition (GO:0039020 GONUTS page)
The process whose specific outcome is the progression of a pronephric nephron tubule over time, from its formation to the mature structure. The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct. PMID:19909807 PMID:9268568
Acknowledgement
This term was created by the GO Consortium with support from:
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0039020
Child Term | Relationship to GO:0039020 |
---|---|
pronephric nephron tubule morphogenesis
|
part_of |
negative regulation of pronephric nephron tubule development
|
negatively_regulates |
pronephric nephron tubule epithelial cell differentiation
|
part_of |
regulation of pronephric nephron tubule development
|
regulates |
pronephric proximal tubule development
|
is_a |
pronephric distal tubule development
|
is_a |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0039020 | pronephric nephron tubule development | Only in Taxon | 7776 | Gnathostomata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A0G2JVK0 | 10116 | A0A0G2JVK0_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K7N2 | 10116 | A0A0G2K7N2_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JP87 | 10116 | A6JP87_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F7FI57 | 10116 | F7FI57_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O35740 | 10090 | CITE2_MOUSE | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | P97769 | 10090 | CITE1_MOUSE | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | Q4LDQ3 | 8364 | IRX5_XENTR | GO:0048793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000250 from this reference: GO_REF:0000024 | |
NOT-qualified manual | protein | Q4V8P1 | 10116 | Q4V8P1_RAT | GO:0001822 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | Q90XW5 | 8355 | IRX5_XENLA | GO:0048793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:18715948 | |
NOT-qualified manual | protein | Q90XW6 | 8355 | IRX4A_XENLA | GO:0048793 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:18715948 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0039020 based on ALL annotations
The top 100 of 150 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
pronephric nephron tubule development
|
1,249,607.60 | 100.00 | 156 | 156 |
regulation of pronephros size
|
1,212,119.40 | 61.01 | 97 | 100 |
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis
|
1,175,226.10 | 49.07 | 79 | 84 |
nephric duct development
|
1,175,226.10 | 49.07 | 79 | 84 |
ureteric bud elongation
|
1,175,226.10 | 49.07 | 79 | 84 |
mesenchymal cell apoptotic process involved in metanephros development
|
1,147,895.40 | 48.47 | 79 | 86 |
negative regulation of mesenchymal cell apoptotic process involved in metanephros development
|
698,056.70 | 36.82 | 81 | 145 |
mesonephric duct formation
|
570,630.00 | 31.60 | 79 | 173 |
hepatoblast differentiation
|
418,300.84 | 25.24 | 79 | 236 |
regulation of branch elongation involved in ureteric bud branching
|
361,608.06 | 22.57 | 79 | 273 |
Totals | 4125 | 6903987 |
No co-occurrence statistics for GO:0039020 based on MANUAL annotations
The top 100 of 118 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
pronephric nephron tubule development
|
80,737.44 | 100.00 | 16 | 16 |
regulation of pronephros size
|
46,135.68 | 21.05 | 4 | 7 |
pronephric field specification
|
17,300.88 | 11.11 | 3 | 14 |
nephron tubule development
|
32,294.98 | 10.53 | 2 | 5 |
glomus development
|
20,184.36 | 9.09 | 2 | 8 |
negative regulation of mesenchymal cell apoptotic process involved in metanephros development
|
11,009.65 | 8.57 | 3 | 22 |
negative regulation of apoptotic process involved in metanephric nephron tubule development
|
13,456.24 | 7.69 | 2 | 12 |
nephrostome development
|
80,737.44 | 6.25 | 1 | 1 |
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis
|
40,368.72 | 5.88 | 1 | 2 |
nephric duct development
|
40,368.72 | 5.88 | 1 | 2 |
Totals | 148 | 79476 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7776 (Gnathostomata) |
2010-07-04 | Added | DEFINITION | The process whose specific outcome is the progression of a pronephric nephron tubule over time, from its formation to the mature structure. The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct. |
2010-07-04 | Added | TERM | pronephric nephron tubule development |
2010-07-04 | Added | RELATION | is a GO:0072080 (nephron tubule development) |
2010-07-04 | Added | RELATION | part of GO:0039019 (pronephric nephron development) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-07-04 | Added | TERM | pronephric nephron tubule development |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-07-04 | Added | DEFINITION | The process whose specific outcome is the progression of a pronephric nephron tubule over time, from its formation to the mature structure. The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2010-07-04 | Added | RELATION | is a GO:0072080 (nephron tubule development) |
2010-07-04 | Added | RELATION | part of GO:0039019 (pronephric nephron development) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7776 (Gnathostomata) |
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