GO:0039693
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viral DNA genome replication
Biological Process
Definition (GO:0039693 GONUTS page)
The replication of a viral DNA genome.
Secondary IDs
GO:0039681
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
DNA-dependent viral DNA replication | exact |
viral DNA replication | exact |
viral DNA-dependent DNA replication | exact |
Ancestor Chart
Child Terms
This table lists all terms that are direct descendants (child terms) of GO:0039693
Child Term | Relationship to GO:0039693 |
---|---|
rolling hairpin viral DNA replication
|
is_a |
bidirectional double-stranded viral DNA replication
|
is_a |
viral DNA strand displacement replication
|
is_a |
viral double stranded DNA replication via reverse transcription
|
is_a |
GO Discussions
The GO editorial group is intending to improve the information provided in this area of the GO. If you would like to be involved in discussions regarding this development activity, please email the GO Consortium. Please note that it is still appropriate to use this term for curation or analysis purpose:
Ontology Development Project | |
---|---|
Viral Processes | Link |
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0039693 | viral DNA genome replication | Never in Taxon | 4896 | Schizosaccharomyces pombe |
More information on taxon constraints in GO is available here
Cross-references
Database | ID | Description |
---|---|---|
InterPro | IPR005210 | Herpesvirus large tegument protein deneddylase |
InterPro | IPR009595 | Bacteriophage DNA replication protein Gp16.7 |
InterPro | IPR014382 | DNA-directed DNA polymerase, family B, adenovirus |
InterPro | IPR014416 | DNA-directed DNA polymerase, family B, phi29-like virus |
InterPro | IPR015200 | Sliding clamp, C-terminal |
InterPro | IPR034749 | DNA-directed DNA polymerase T4 type |
InterPro | IPR035184 | DNA replication protein 17 |
InterPro | IPR037211 | Bacteriophage DNA replication protein Gp16.7 superfamily |
UniProtKB-KW | KW-1194 | Viral DNA replication |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0039693 based on ALL annotations
The top 100 of 191 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
viral DNA genome replication
|
6,966.08 | 100.00 | 27,984 | 27,984 |
bidirectional double-stranded viral DNA replication
|
4,668.13 | 4.96 | 1,422 | 2,122 |
base-excision repair, gap-filling
|
817.55 | 4.27 | 1,761 | 15,005 |
nucleotide-excision repair, DNA gap filling
|
499.69 | 3.47 | 1,761 | 24,550 |
3'-5'-DNA exonuclease activity
|
466.15 | 3.35 | 1,761 | 26,316 |
deNEDDylase activity
|
1,093.68 | 3.02 | 1,007 | 6,414 |
viral DNA strand displacement replication
|
6,966.08 | 2.99 | 836 | 836 |
DNA-templated DNA replication
|
198.92 | 2.76 | 12,733 | 445,900 |
DNA polymerase processivity factor activity
|
600.14 | 2.65 | 1,034 | 12,002 |
regulation of DNA replication
|
251.22 | 2.62 | 2,436 | 67,548 |
Totals | 212094 | 132913759 |
No co-occurrence statistics for GO:0039693 based on MANUAL annotations
The top 37 of 37 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
viral DNA genome replication
|
37,994.09 | 100.00 | 34 | 34 |
viral DNA strand displacement replication
|
29,550.96 | 19.44 | 7 | 9 |
viral capsid
|
4,652.34 | 7.79 | 6 | 49 |
host cell nucleus
|
2,763.21 | 6.42 | 12 | 165 |
viral transcription
|
4,749.26 | 4.17 | 2 | 16 |
bidirectional double-stranded viral DNA replication
|
2,650.75 | 4.05 | 3 | 43 |
host cell membrane
|
1,899.70 | 2.78 | 2 | 40 |
host cell nuclear matrix
|
9,498.52 | 2.70 | 1 | 4 |
viral terminase complex
|
7,598.82 | 2.63 | 1 | 5 |
viral replication complex
|
6,332.35 | 2.56 | 1 | 6 |
Totals | 129 | 90346 |
GO Slims
This term is present in the following GO Consortium-maintained GO slims:
GO slim name | Total Number of Terms in Slim |
---|---|
goslim_virus | 23 |
Change Log
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- Term
- Term
- Definition / Synonyms
- Definition / Synonyms
- Relationships
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- Cross-references
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- Other
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe) |
2024-06-07 | Added | SUBSET | goslim_virus |
2022-11-22 | Added | RELATION | is a GO:0071897 (DNA biosynthetic process) |
2017-05-12 | Deleted | RELATION | is a GO:0044034 (obsolete multi-organism biosynthetic process) |
2017-05-12 | Deleted | RELATION | is a GO:0006261 (DNA-templated DNA replication) |
2017-05-12 | Deleted | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2017-05-06 | Added | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2013-11-28 | Added | RELATION | is a GO:0044034 (obsolete multi-organism biosynthetic process) |
2013-10-30 | Added | RELATION | is a GO:0006261 (DNA-templated DNA replication) |
2013-10-30 | Deleted | RELATION | is a GO:0006260 (DNA replication) |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-10-25 | Added | TERM | viral DNA genome replication |
Timestamp | Action | Category | Detail |
---|---|---|---|
2013-10-30 | Added | SYNONYM | DNA-dependent viral DNA replication |
2013-10-30 | Added | SYNONYM | viral DNA-dependent DNA replication |
2013-10-25 | Added | DEFINITION | The replication of a viral DNA genome. |
2013-10-25 | Added | SYNONYM | viral DNA replication |
Timestamp | Action | Category | Detail |
---|---|---|---|
2022-11-22 | Added | RELATION | is a GO:0071897 (DNA biosynthetic process) |
2017-05-12 | Deleted | RELATION | is a GO:0044034 (obsolete multi-organism biosynthetic process) |
2017-05-12 | Deleted | RELATION | is a GO:0006261 (DNA-templated DNA replication) |
2017-05-12 | Deleted | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2017-05-06 | Added | RELATION | is a GO:0044764 (obsolete multi-organism cellular process) |
2013-11-28 | Added | RELATION | is a GO:0044034 (obsolete multi-organism biosynthetic process) |
2013-10-30 | Added | RELATION | is a GO:0006261 (DNA-templated DNA replication) |
2013-10-30 | Deleted | RELATION | is a GO:0006260 (DNA replication) |
2013-10-25 | Added | RELATION | is a GO:0019079 (viral genome replication) |
2013-10-25 | Added | RELATION | is a GO:0006260 (DNA replication) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-09-05 | Added | CONSTRAINT | never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe) |
2024-06-07 | Added | SUBSET | goslim_virus |
2013-10-30 | Added | SECONDARY | GO:0039681 (viral DNA-dependent DNA replication) |
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