This term is obsolete.

GO:0039693 JSON

viral DNA genome replication

Biological Process

Definition (GO:0039693 GONUTS page)

The replication of a viral DNA genome.

Secondary IDs

GO:0039681

31,003 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
DNA-dependent viral DNA replication exact
viral DNA replication exact
viral DNA-dependent DNA replication exact

Ancestor Chart

Ancestor chart for GO:0039693
Chart options
Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0039693

Child Term Relationship to
GO:0039693
rolling hairpin viral DNA replication
is_a
bidirectional double-stranded viral DNA replication
is_a
viral DNA strand displacement replication
is_a
viral double stranded DNA replication via reverse transcription
is_a

GO Discussions

The GO editorial group is intending to improve the information provided in this area of the GO. If you would like to be involved in discussions regarding this development activity, please email the GO Consortium. Please note that it is still appropriate to use this term for curation or analysis purpose:

Ontology Development Project
Viral Processes Link

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0039693 viral DNA genome replication Never in Taxon 4896 Schizosaccharomyces pombe

More information on taxon constraints in GO is available here

Cross-references

Database ID Description
InterPro IPR005210 Herpesvirus large tegument protein deneddylase
InterPro IPR009595 Bacteriophage DNA replication protein Gp16.7
InterPro IPR014382 DNA-directed DNA polymerase, family B, adenovirus
InterPro IPR014416 DNA-directed DNA polymerase, family B, phi29-like virus
InterPro IPR015200 Sliding clamp, C-terminal
InterPro IPR034749 DNA-directed DNA polymerase T4 type
InterPro IPR035184 DNA replication protein 17
InterPro IPR037211 Bacteriophage DNA replication protein Gp16.7 superfamily
UniProtKB-KW KW-1194 Viral DNA replication

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0039693 based on ALL annotations
The top 100 of 191 co-occurring terms
Co-occurring Term PR S% #Together #Compared
viral DNA genome replication
6,966.08 100.00 27,984 27,984
bidirectional double-stranded viral DNA replication
4,668.13 4.96 1,422 2,122
base-excision repair, gap-filling
817.55 4.27 1,761 15,005
nucleotide-excision repair, DNA gap filling
499.69 3.47 1,761 24,550
3'-5'-DNA exonuclease activity
466.15 3.35 1,761 26,316
deNEDDylase activity
1,093.68 3.02 1,007 6,414
viral DNA strand displacement replication
6,966.08 2.99 836 836
DNA-templated DNA replication
198.92 2.76 12,733 445,900
DNA polymerase processivity factor activity
600.14 2.65 1,034 12,002
regulation of DNA replication
251.22 2.62 2,436 67,548
Totals 212094 132913759
No co-occurrence statistics for GO:0039693 based on MANUAL annotations
The top 37 of 37 co-occurring terms
Co-occurring Term PR S% #Together #Compared
viral DNA genome replication
37,994.09 100.00 34 34
viral DNA strand displacement replication
29,550.96 19.44 7 9
viral capsid
4,652.34 7.79 6 49
host cell nucleus
2,763.21 6.42 12 165
viral transcription
4,749.26 4.17 2 16
bidirectional double-stranded viral DNA replication
2,650.75 4.05 3 43
host cell membrane
1,899.70 2.78 2 40
host cell nuclear matrix
9,498.52 2.70 1 4
viral terminase complex
7,598.82 2.63 1 5
viral replication complex
6,332.35 2.56 1 6
Totals 129 90346

GO Slims

This term is present in the following GO Consortium-maintained GO slims:

GO slim name Total Number of Terms in Slim
goslim_virus 23

Change Log

Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe)
2024-06-07 Added SUBSET goslim_virus
2022-11-22 Added RELATION is a GO:0071897 (DNA biosynthetic process)
2017-05-12 Deleted RELATION is a GO:0044034 (obsolete multi-organism biosynthetic process)
2017-05-12 Deleted RELATION is a GO:0006261 (DNA-templated DNA replication)
2017-05-12 Deleted RELATION is a GO:0044764 (obsolete multi-organism cellular process)
2017-05-06 Added RELATION is a GO:0044764 (obsolete multi-organism cellular process)
2013-11-28 Added RELATION is a GO:0044034 (obsolete multi-organism biosynthetic process)
2013-10-30 Added RELATION is a GO:0006261 (DNA-templated DNA replication)
2013-10-30 Deleted RELATION is a GO:0006260 (DNA replication)
Timestamp Action Category Detail
2013-10-25 Added TERM viral DNA genome replication
Timestamp Action Category Detail
2013-10-30 Added SYNONYM DNA-dependent viral DNA replication
2013-10-30 Added SYNONYM viral DNA-dependent DNA replication
2013-10-25 Added DEFINITION The replication of a viral DNA genome.
2013-10-25 Added SYNONYM viral DNA replication
Timestamp Action Category Detail
2022-11-22 Added RELATION is a GO:0071897 (DNA biosynthetic process)
2017-05-12 Deleted RELATION is a GO:0044034 (obsolete multi-organism biosynthetic process)
2017-05-12 Deleted RELATION is a GO:0006261 (DNA-templated DNA replication)
2017-05-12 Deleted RELATION is a GO:0044764 (obsolete multi-organism cellular process)
2017-05-06 Added RELATION is a GO:0044764 (obsolete multi-organism cellular process)
2013-11-28 Added RELATION is a GO:0044034 (obsolete multi-organism biosynthetic process)
2013-10-30 Added RELATION is a GO:0006261 (DNA-templated DNA replication)
2013-10-30 Deleted RELATION is a GO:0006260 (DNA replication)
2013-10-25 Added RELATION is a GO:0019079 (viral genome replication)
2013-10-25 Added RELATION is a GO:0006260 (DNA replication)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-09-05 Added CONSTRAINT never_in_taxon NCBITaxon:4896 (Schizosaccharomyces pombe)
2024-06-07 Added SUBSET goslim_virus
2013-10-30 Added SECONDARY GO:0039681 (viral DNA-dependent DNA replication)
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