GO:0042794
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plastid rRNA transcription
Biological Process
Definition (GO:0042794 GONUTS page)
The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase.
Synonyms
Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.
Synonym | Type |
---|---|
rRNA transcription from plastid promoter | exact |
Ancestor Chart
Annotation Guidance
Usage of this term is subject to the following annotation guidelines:
Annotating to transcription processes | Link |
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | Q96327 | 3702 | EBP1_ARATH | GO:0006351 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000314 from this reference: PMID:15689342 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0042794 based on ALL annotations
The top 66 of 66 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
plastid rRNA transcription
|
1,772,170.80 | 100.00 | 110 | 110 |
plastid localization
|
1,772,170.80 | 35.45 | 39 | 39 |
regulation of unsaturated fatty acid biosynthetic process
|
1,772,170.80 | 35.45 | 39 | 39 |
regulation of lateral root development
|
628,315.06 | 21.55 | 39 | 110 |
regulation of photosynthesis
|
394,835.97 | 16.54 | 43 | 193 |
primary root development
|
151,197.12 | 7.53 | 43 | 504 |
regulation of root meristem growth
|
70,381.52 | 3.70 | 39 | 982 |
reactive nitrogen species metabolic process
|
1,772,170.60 | 3.64 | 4 | 4 |
plastid gene expression
|
393,815.72 | 3.23 | 4 | 18 |
root meristem specification
|
38,981.76 | 2.11 | 39 | 1,773 |
Totals | 1714 | 153133089 |
No co-occurrence statistics for GO:0042794 based on MANUAL annotations
The top 40 of 40 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
plastid rRNA transcription
|
258,359.80 | 100.00 | 5 | 5 |
reactive nitrogen species metabolic process
|
258,359.80 | 40.00 | 2 | 2 |
plastid gene expression
|
172,239.88 | 33.33 | 2 | 3 |
plastid localization
|
258,359.80 | 20.00 | 1 | 1 |
regulation of unsaturated fatty acid biosynthetic process
|
258,359.80 | 20.00 | 1 | 1 |
regulation of seedling development
|
43,059.97 | 13.33 | 2 | 12 |
regulation of photosynthesis
|
32,294.98 | 11.54 | 3 | 24 |
regulation of response to water deprivation
|
23,487.25 | 8.00 | 2 | 22 |
regulation of cellular hyperosmotic salinity response
|
21,529.98 | 7.41 | 2 | 24 |
regulation of lateral root development
|
13,597.88 | 4.35 | 1 | 19 |
Totals | 75 | 168091 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2018-01-20 | Added | SYNONYM | rRNA transcription from plastid promoter |
2018-01-20 | Updated | TERM | plastid rRNA transcription |
2008-05-13 | Added | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase. |
2008-05-12 | Deleted | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase. |
2008-04-01 | Updated | RELATION | is a GO:0009303 (rRNA transcription) |
2008-04-01 | Updated | RELATION | is a GO:0042793 (plastid transcription) |
2003-10-23 | Updated | TERM | rRNA transcription from plastid promoter |
2003-10-23 | Updated | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase. |
2003-07-15 | Added | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA Polymerase. |
2003-07-15 | Added | TERM | rRNA transcription from plastid promotor |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-01-20 | Updated | TERM | plastid rRNA transcription |
2003-10-23 | Updated | TERM | rRNA transcription from plastid promoter |
2003-07-15 | Added | TERM | rRNA transcription from plastid promotor |
Timestamp | Action | Category | Detail |
---|---|---|---|
2018-01-20 | Added | SYNONYM | rRNA transcription from plastid promoter |
2008-05-13 | Added | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase. |
2008-05-12 | Deleted | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase. |
2003-10-23 | Updated | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase. |
2003-07-15 | Added | DEFINITION | The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA Polymerase. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-04-01 | Updated | RELATION | is a GO:0009303 (rRNA transcription) |
2008-04-01 | Updated | RELATION | is a GO:0042793 (plastid transcription) |
Timestamp | Action | Category | Detail |
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Timestamp | Action | Category | Detail |
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