This term is obsolete.

GO:0042816 JSON

vitamin B6 metabolic process

Biological Process

Definition (GO:0042816 GONUTS page)

The chemical reactions and pathways involving any of the vitamin B6 compounds: pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate. PMID:30037155 PMID:30671974

333,124 annotations

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope.

Synonym Type
vitamin B6 metabolism exact

Ancestor Chart

Ancestor chart for GO:0042816
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Ancestor chart

Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0042816

Child Term Relationship to
GO:0042816
pyridoxamine metabolic process
is_a
vitamin B6 biosynthetic process
is_a
pyridoxal metabolic process
is_a
pyridoxine metabolic process
is_a
pyridoxal phosphate metabolic process
is_a
vitamin B6 catabolic process
is_a

Cross-references

Database ID Description
Reactome R-HSA-964975

Cross-Ontology Relations

Relation Other Ontology ID Term
has_primary_input_or_output CHEBI CHEBI:27306 vitamin B6

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0042816 based on ALL annotations
The top 100 of 331 co-occurring terms
Co-occurring Term PR S% #Together #Compared
vitamin B6 metabolic process
3,954.56 100.00 50,108 50,108
pyridoxamine phosphate oxidase activity
3,878.83 64.90 32,935 33,578
pyridoxal 5'-phosphate salvage
3,788.45 33.55 17,060 17,808
pyridoxal kinase activity
3,600.85 32.91 17,042 18,716
pyridoxal phosphate biosynthetic process
1,499.95 31.67 32,948 86,866
pyridoxine biosynthetic process
1,071.85 23.75 32,936 121,516
FMN binding
169.17 4.18 32,936 769,929
hydroxymethylpyrimidine kinase activity
150.75 1.79 1,630 42,759
NAD(P)HX epimerase activity
39.57 0.50 491 49,071
phosphomethylpyrimidine kinase activity
29.45 0.34 311 41,764
Totals 304694 109611137
No co-occurrence statistics for GO:0042816 based on MANUAL annotations
The top 22 of 22 co-occurring terms
Co-occurring Term PR S% #Together #Compared
vitamin B6 metabolic process
23,924.29 100.00 59 59
pyridoxal phosphate binding
564.35 2.36 56 2,374
pyridoxamine phosphate oxidase activity
637.98 1.52 2 75
coenzyme F420 binding
629.59 1.04 1 38
response to sucrose
312.74 0.95 2 153
asexual reproduction
498.42 0.94 1 48
oxidoreductase activity, acting on the CH-CH group of donors
469.10 0.92 1 51
pyridoxal kinase activity
186.91 0.54 1 128
pyridoxal 5'-phosphate salvage
182.63 0.53 1 131
pyridoxal phosphate biosynthetic process
144.56 0.52 2 331
Totals 208 686971

Change Log

Timestamp Action Category Detail
2024-12-05 Added XREF Reactome:R-HSA-964975
2020-06-02 Deleted RELATION is a GO:0017144 (drug metabolic process)
2017-11-29 Added RELATION is a GO:0017144 (drug metabolic process)
2017-08-13 Deleted RELATION is a GO:0044763 (single-organism cellular process)
2013-11-28 Added RELATION is a GO:0044763 (single-organism cellular process)
2012-11-02 Added RELATION is a GO:0072524 (pyridine-containing compound metabolic process)
2012-11-02 Deleted RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2009-07-03 Added RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2009-02-01 Added DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds: pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2009-02-01 Deleted DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
Timestamp Action Category Detail
2007-01-15 Updated TERM vitamin B6 metabolic process
2003-08-08 Added TERM vitamin B6 metabolism
Timestamp Action Category Detail
2009-02-01 Added DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds: pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2009-02-01 Deleted DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2008-05-13 Added DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2008-05-12 Deleted DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2007-08-09 Deleted SYNONYM vitamin B6 metabolism
2007-08-09 Added SYNONYM vitamin B6 metabolism
2007-01-29 Added SYNONYM vitamin B6 metabolism
2006-05-04 Updated DEFINITION The chemical reactions and pathways involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2005-01-21 Updated DEFINITION The chemical reactions involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
2003-08-08 Added DEFINITION The chemical reactions and physical changes involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
Timestamp Action Category Detail
2020-06-02 Deleted RELATION is a GO:0017144 (drug metabolic process)
2017-11-29 Added RELATION is a GO:0017144 (drug metabolic process)
2017-08-13 Deleted RELATION is a GO:0044763 (single-organism cellular process)
2013-11-28 Added RELATION is a GO:0044763 (single-organism cellular process)
2012-11-02 Added RELATION is a GO:0072524 (pyridine-containing compound metabolic process)
2012-11-02 Deleted RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2009-07-03 Added RELATION is a GO:0046483 (obsolete heterocycle metabolic process)
2008-04-01 Updated RELATION is a GO:0006767 (water-soluble vitamin metabolic process)
Timestamp Action Category Detail
2024-12-05 Added XREF Reactome:R-HSA-964975
Timestamp Action Category Detail
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