This term is obsolete.

GO:0043049 JSON

otic placode formation

Biological Process

Definition (GO:0043049 GONUTS page)

The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. PMID:12668634

569 annotations

Ancestor Chart

Ancestor chart for GO:0043049
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Ancestor chart

Taxon Constraints

The use of this term should conform to the following taxon constraints:

Ancestor GO ID Ancestor GO Term Name Relationship Taxon ID Taxon Reference(s)
GO:0043049 otic placode formation Only in Taxon 89593 Craniata

More information on taxon constraints in GO is available here

Annotation Blacklist

This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:

Category Entity Type Entity ID Taxon ID Entity Name Ancestor GO ID Reason Rule/Method ID
NOT-qualified manual protein A0A0G2JVK0 10116 A0A0G2JVK0_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A0G2K7N2 10116 A0A0G2K7N2_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A0A8I6AHZ0 10116 A0A8I6AHZ0_RAT GO:0042472 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6IAP1 10116 A6IAP1_RAT GO:0042472 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein A6JP87 10116 A6JP87_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein D3ZZS8 10116 D3ZZS8_RAT GO:0042472 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein F7FI57 10116 F7FI57_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096
NOT-qualified manual protein O35740 10090 CITE2_MOUSE GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577
NOT-qualified manual protein P97769 10090 CITE1_MOUSE GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577
NOT-qualified manual protein Q4V8P1 10116 Q4V8P1_RAT GO:0002009 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096

Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated.

No co-occurrence statistics for GO:0043049 based on ALL annotations
The top 100 of 312 co-occurring terms
Co-occurring Term PR S% #Together #Compared
otic placode formation
379,997.62 100.00 513 513
ectodermal placode formation
371,119.16 40.35 209 214
ectodermal placode development
307,140.94 38.12 215 266
olfactory placode development
207,781.95 18.35 111 203
otic vesicle formation
94,755.19 17.68 194 778
rhombomere 6 development
201,998.72 16.78 101 190
neural crest cell fate specification
128,220.06 15.09 110 326
rhombomere 5 development
130,543.41 14.31 101 294
locus ceruleus development
123,407.59 13.97 101 311
iridophore differentiation
82,977.16 10.63 88 403
Totals 7840 267222
No co-occurrence statistics for GO:0043049 based on MANUAL annotations
The top 100 of 282 co-occurring terms
Co-occurring Term PR S% #Together #Compared
otic placode formation
34,913.48 100.00 37 37
ectodermal placode formation
24,003.02 26.19 11 16
ectodermal placode development
21,336.02 25.00 11 18
olfactory placode development
18,483.61 20.00 9 17
anterior/posterior pattern specification involved in pronephros development
19,396.38 12.20 5 9
neural crest cell fate specification
5,942.72 10.53 8 47
iridophore differentiation
6,714.13 8.62 5 26
otic vesicle formation
3,933.91 8.00 8 71
pronephric nephron tubule epithelial cell differentiation
8,214.94 8.00 4 17
olfactory placode formation
7,350.21 7.69 4 19
Totals 304 5661

Change Log

Timestamp Action Category Detail
2024-03-22 Deleted CONSTRAINT in_taxon NCBITaxon:7742 (Vertebrata)
2024-03-22 Added CONSTRAINT in_taxon NCBITaxon:89593 (Craniata)
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:7742 (Vertebrata)
2009-08-06 Added RELATION is a GO:0060788 (ectodermal placode formation)
2009-08-06 Deleted RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2008-05-13 Added DEFINITION The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
2008-05-12 Deleted DEFINITION The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
2008-04-01 Updated RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2008-04-01 Updated RELATION part of GO:0030916 (otic vesicle formation)
2005-06-28 Updated DEFINITION The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
Timestamp Action Category Detail
2003-12-19 Added TERM otic placode formation
Timestamp Action Category Detail
2008-05-13 Added DEFINITION The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
2008-05-12 Deleted DEFINITION The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
2005-06-28 Updated DEFINITION The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
2003-12-19 Added DEFINITION The initial developmental processes that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.
Timestamp Action Category Detail
2009-08-06 Added RELATION is a GO:0060788 (ectodermal placode formation)
2009-08-06 Deleted RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2008-04-01 Updated RELATION is a GO:0048646 (anatomical structure formation involved in morphogenesis)
2008-04-01 Updated RELATION part of GO:0030916 (otic vesicle formation)
Timestamp Action Category Detail
Timestamp Action Category Detail
2024-03-22 Deleted CONSTRAINT in_taxon NCBITaxon:7742 (Vertebrata)
2024-03-22 Added CONSTRAINT in_taxon NCBITaxon:89593 (Craniata)
2024-03-05 Added CONSTRAINT in_taxon NCBITaxon:7742 (Vertebrata)
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