GO:0043049
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otic placode formation
Biological Process
Definition (GO:0043049 GONUTS page)
The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. PMID:12668634
Ancestor Chart
Taxon Constraints
The use of this term should conform to the following taxon constraints:
Ancestor GO ID | Ancestor GO Term Name | Relationship | Taxon ID | Taxon | Reference(s) |
---|---|---|---|---|---|
GO:0043049 | otic placode formation | Only in Taxon | 89593 | Craniata |
More information on taxon constraints in GO is available here
Annotation Blacklist
This list aims to correct incorrect annotations to UniProtKB accessions inferred from electronic annotation (IEA) methods that are supplied by the UniProt-GOA project to the GO Consortium:
Category | Entity Type | Entity ID | Taxon ID | Entity Name | Ancestor GO ID | Reason | Rule/Method ID |
---|---|---|---|---|---|---|---|
NOT-qualified manual | protein | A0A0G2JVK0 | 10116 | A0A0G2JVK0_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A0G2K7N2 | 10116 | A0A0G2K7N2_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A0A8I6AHZ0 | 10116 | A0A8I6AHZ0_RAT | GO:0042472 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6IAP1 | 10116 | A6IAP1_RAT | GO:0042472 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | A6JP87 | 10116 | A6JP87_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | D3ZZS8 | 10116 | D3ZZS8_RAT | GO:0042472 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | F7FI57 | 10116 | F7FI57_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 | |
NOT-qualified manual | protein | O35740 | 10090 | CITE2_MOUSE | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | P97769 | 10090 | CITE1_MOUSE | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000315 from this reference: PMID:17615577 | |
NOT-qualified manual | protein | Q4V8P1 | 10116 | Q4V8P1_RAT | GO:0002009 | 1 NOT-qualified manual annotation exists with evidence code ECO:0000266 from this reference: GO_REF:0000096 |
Co-occurring Terms
These tables show the number of times the term listed in the table has been co-annotated.
No co-occurrence statistics for GO:0043049 based on ALL annotations
The top 100 of 312 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
otic placode formation
|
379,997.62 | 100.00 | 513 | 513 |
ectodermal placode formation
|
371,119.16 | 40.35 | 209 | 214 |
ectodermal placode development
|
307,140.94 | 38.12 | 215 | 266 |
olfactory placode development
|
207,781.95 | 18.35 | 111 | 203 |
otic vesicle formation
|
94,755.19 | 17.68 | 194 | 778 |
rhombomere 6 development
|
201,998.72 | 16.78 | 101 | 190 |
neural crest cell fate specification
|
128,220.06 | 15.09 | 110 | 326 |
rhombomere 5 development
|
130,543.41 | 14.31 | 101 | 294 |
locus ceruleus development
|
123,407.59 | 13.97 | 101 | 311 |
iridophore differentiation
|
82,977.16 | 10.63 | 88 | 403 |
Totals | 7840 | 267222 |
No co-occurrence statistics for GO:0043049 based on MANUAL annotations
The top 100 of 282 co-occurring terms
Co-occurring Term | PR | S% | #Together | #Compared |
---|---|---|---|---|
otic placode formation
|
34,913.48 | 100.00 | 37 | 37 |
ectodermal placode formation
|
24,003.02 | 26.19 | 11 | 16 |
ectodermal placode development
|
21,336.02 | 25.00 | 11 | 18 |
olfactory placode development
|
18,483.61 | 20.00 | 9 | 17 |
anterior/posterior pattern specification involved in pronephros development
|
19,396.38 | 12.20 | 5 | 9 |
neural crest cell fate specification
|
5,942.72 | 10.53 | 8 | 47 |
iridophore differentiation
|
6,714.13 | 8.62 | 5 | 26 |
otic vesicle formation
|
3,933.91 | 8.00 | 8 | 71 |
pronephric nephron tubule epithelial cell differentiation
|
8,214.94 | 8.00 | 4 | 17 |
olfactory placode formation
|
7,350.21 | 7.69 | 4 | 19 |
Totals | 304 | 5661 |
Change Log
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Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-22 | Deleted | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2024-03-22 | Added | CONSTRAINT | in_taxon NCBITaxon:89593 (Craniata) |
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2009-08-06 | Added | RELATION | is a GO:0060788 (ectodermal placode formation) |
2009-08-06 | Deleted | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2008-05-13 | Added | DEFINITION | The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
2008-05-12 | Deleted | DEFINITION | The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
2008-04-01 | Updated | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2008-04-01 | Updated | RELATION | part of GO:0030916 (otic vesicle formation) |
2005-06-28 | Updated | DEFINITION | The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2003-12-19 | Added | TERM | otic placode formation |
Timestamp | Action | Category | Detail |
---|---|---|---|
2008-05-13 | Added | DEFINITION | The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
2008-05-12 | Deleted | DEFINITION | The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
2005-06-28 | Updated | DEFINITION | The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
2003-12-19 | Added | DEFINITION | The initial developmental processes that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain. |
Timestamp | Action | Category | Detail |
---|---|---|---|
2009-08-06 | Added | RELATION | is a GO:0060788 (ectodermal placode formation) |
2009-08-06 | Deleted | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2008-04-01 | Updated | RELATION | is a GO:0048646 (anatomical structure formation involved in morphogenesis) |
2008-04-01 | Updated | RELATION | part of GO:0030916 (otic vesicle formation) |
Timestamp | Action | Category | Detail |
---|
Timestamp | Action | Category | Detail |
---|---|---|---|
2024-03-22 | Deleted | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
2024-03-22 | Added | CONSTRAINT | in_taxon NCBITaxon:89593 (Craniata) |
2024-03-05 | Added | CONSTRAINT | in_taxon NCBITaxon:7742 (Vertebrata) |
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